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PDB: 46167 results

6XAY
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BU of 6xay by Molmil
Structure of a fragment of human fibronectin containing the 10th, 11th and 12th type III domains
Descriptor: Fibronectin, GLYCEROL
Authors:Mou, T.C, Nepomuceno, P.A, Sprang, S.R, Briknarova, K.
Deposit date:2020-06-05
Release date:2021-06-09
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:Fragment of human fibronectin containing the 10th, 11th and 12th type III domains
To Be Published
6OQ8
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BU of 6oq8 by Molmil
Structure of the GTD domain of Clostridium difficile toxin B in complex with VHH 7F
Descriptor: 7F, Toxin B
Authors:Chen, P, Lam, K, Jin, R.
Deposit date:2019-04-25
Release date:2019-07-10
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of the full-length Clostridium difficile toxin B.
Nat.Struct.Mol.Biol., 26, 2019
6XAL
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BU of 6xal by Molmil
Crystal structure of NzeB in complex with cyclo-(L-Trp-L-Val)
Descriptor: (3S,6S)-3-[(1H-indol-3-yl)methyl]-6-(propan-2-yl)piperazine-2,5-dione, NzeB, PROTOPORPHYRIN IX CONTAINING FE
Authors:Shende, V.V, Khatri, Y, Newmister, S.A, Sanders, J.N, Lindovska, P, Yu, F, Doyon, T.J, Kim, J, Movassaghi, M, Houk, K.N, Sherman, D.H.
Deposit date:2020-06-04
Release date:2021-06-09
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.349 Å)
Cite:Structure and Function of NzeB, a Versatile C-C and C-N Bond-Forming Diketopiperazine Dimerase.
J.Am.Chem.Soc., 142, 2020
6ORI
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BU of 6ori by Molmil
Enterococcal surface protein, partial N-terminal region
Descriptor: CALCIUM ION, EF0056
Authors:Spiegelman, L, Zhang, L, Tezcan, A, Ghosh, P.
Deposit date:2019-04-30
Release date:2020-05-13
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Enterococcal surface protein, partial N-terminal region (CASP target)
To Be Published
6XAK
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BU of 6xak by Molmil
Crystal structure of NzeB in complex with cyclo-(L-Trp-L-Pro) and cyclo-(L-Trp-L-Trp)
Descriptor: (3S,6S)-3,6-bis[(1H-indol-3-yl)methyl]piperazine-2,5-dione, (3S,8aS)-3-(1H-indol-3-ylmethyl)hexahydropyrrolo[1,2-a]pyrazine-1,4-dione, 1,2-ETHANEDIOL, ...
Authors:Shende, V.V, Khatri, Y, Newmister, S.A, Sanders, J.N, Lindovska, P, Yu, F, Doyon, T.J, Kim, J, Movassaghi, M, Houk, K.N, Sherman, D.H.
Deposit date:2020-06-04
Release date:2021-06-09
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.479 Å)
Cite:Structure and Function of NzeB, a Versatile C-C and C-N Bond-Forming Diketopiperazine Dimerase.
J.Am.Chem.Soc., 142, 2020
5Z1M
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BU of 5z1m by Molmil
Crystal structure of the complex of trimeric Phosphopantetheine adenylyltransferase from Acinetobacter baumannii with citrate ion at 1.87 A resolution
Descriptor: CITRIC ACID, Phosphopantetheine adenylyltransferase
Authors:Singh, P.K, Gupta, A, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2017-12-26
Release date:2018-02-14
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Crystal structure of the complex of trimeric Phosphopantetheine adenylyltransferase from Acinetobacter baumannii with citrate ion at 1.87 A resolution
To Be Published
6XAM
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BU of 6xam by Molmil
Crystal structure of NzeB in complex with cyclo-(L-Trp-L-homoalanine)
Descriptor: (3S,6S)-3-ethyl-6-[(1H-indol-3-yl)methyl]piperazine-2,5-dione, 1,2-ETHANEDIOL, NzeB, ...
Authors:Shende, V.V, Khatri, Y, Newmister, S.A, Sanders, J.N, Lindovska, P, Yu, F, Doyon, T.J, Kim, J, Movassaghi, M, Houk, K.N, Sherman, D.H.
Deposit date:2020-06-04
Release date:2021-06-09
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.481 Å)
Cite:Structure and Function of NzeB, a Versatile C-C and C-N Bond-Forming Diketopiperazine Dimerase.
J.Am.Chem.Soc., 142, 2020
6O62
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BU of 6o62 by Molmil
Crystal structure of Sec4p, a Rab family GTPase from Candida albicans
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Ras-related protein SEC4
Authors:Stogios, P.J, Skarina, T, Di Leo, R, Savchenko, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2019-03-05
Release date:2019-04-03
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:To be published
To Be Published
8RNY
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BU of 8rny by Molmil
Hen Egg White Lysozyme soaked with with [H2Ind][trans-RuCl4(DMSO)(HInd)]
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Lysozyme C, ...
Authors:Oszajca, M, Flejszar, M, Szura, A, Drozdz, P, Brindell, M, Kurpiewska, K.
Deposit date:2024-01-11
Release date:2024-02-07
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.02 Å)
Cite:Exploring the coordination chemistry of ruthenium complexes with lysozymes: structural and in-solution studies.
Front Chem, 12, 2024
5NZ1
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BU of 5nz1 by Molmil
Structure of Transcriptional Regulatory Repressor Protein - EthR from Mycobacterium Tuberculosis in complex with sutezolid
Descriptor: HTH-type transcriptional regulator EthR, ~{N}-[[(5~{S})-3-(3-fluoranyl-4-thiomorpholin-4-yl-phenyl)-2-oxidanylidene-1,3-oxazolidin-5-yl]methyl]ethanamide
Authors:Mendes, V, Blaszczyk, M, Nikiforov, P.O, Blundell, T.L.
Deposit date:2017-05-12
Release date:2018-05-30
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:The antibiotics linezolid and sutezolid are ligands for Mycobacterium tuberculosis EthR
To Be Published
6T6C
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BU of 6t6c by Molmil
Complex with chitin oligomer of C-type lysozyme from the upper gastrointestinal tract of Opisthocomus hoatzin
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, Lysozyme C
Authors:Taylor, E.J, Skjot, M, Skov, L.K, Klausen, M, De Maria, L, Gippert, G.P, Turkenburg, J.P, Davies, G.J, Wilson, K.S.
Deposit date:2019-10-18
Release date:2019-11-20
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:The C-Type Lysozyme from the upper Gastrointestinal Tract of Opisthocomus hoatzin, the Stinkbird.
Int J Mol Sci, 20, 2019
6XAJ
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BU of 6xaj by Molmil
Crystal structure of NzeB
Descriptor: 1,2-ETHANEDIOL, NzeB, PROTOPORPHYRIN IX CONTAINING FE
Authors:Shende, V.V, Khatri, Y, Newmister, S.A, Sanders, J.N, Lindovska, P, Yu, F, Doyon, T.J, Kim, J, Movassaghi, M, Houk, K.N, Sherman, D.H.
Deposit date:2020-06-04
Release date:2021-06-09
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.498 Å)
Cite:Structure and Function of NzeB, a Versatile C-C and C-N Bond-Forming Diketopiperazine Dimerase.
J.Am.Chem.Soc., 142, 2020
3SDV
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BU of 3sdv by Molmil
Structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production
Descriptor: (1-hydroxyethane-1,1-diyl)bis(phosphonic acid), Alpha-bisabolene synthase, CHLORIDE ION, ...
Authors:McAndrew, R.P, Peralta-Yahya, P.P, DeGiovanni, A, Pereira, J.H, Hadi, M.Z, Keasling, J.D, Adams, P.D.
Deposit date:2011-06-09
Release date:2011-12-14
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production.
Structure, 19, 2011
3MMO
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BU of 3mmo by Molmil
Structure of the Thioalkalivibrio nitratireducens cytochrome c nitrite reductase in complex with cyanide
Descriptor: 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, ...
Authors:Trofimov, A.A, Polyakov, K.M, Boyko, K.M, Tikhonova, T.V, Lamzin, V.S, Bourenkov, G.P, Popov, V.O.
Deposit date:2010-04-20
Release date:2010-09-29
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structures of complexes of octahaem cytochrome c nitrite reductase from Thioalkalivibrio nitratireducens with sulfite and cyanide.
Acta Crystallogr.,Sect.D, 66, 2010
6UPH
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BU of 6uph by Molmil
Structure of a Yeast Centromeric Nucleosome at 2.7 Angstrom resolution
Descriptor: DNA (119-MER), Histone H2A, Histone H2B.1, ...
Authors:Migl, D, Kschonsak, M, Arthur, C.P, Khin, Y, Harrison, S.C, Ciferri, C, Dimitrova, Y.N.
Deposit date:2019-10-17
Release date:2019-11-06
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Cryoelectron Microscopy Structure of a Yeast Centromeric Nucleosome at 2.7 angstrom Resolution.
Structure, 28, 2020
5NXU
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BU of 5nxu by Molmil
Complex structure with maltose of Providencia stuartii Omp-Pst1 porin
Descriptor: CALCIUM ION, LAURYL DIMETHYLAMINE-N-OXIDE, Porin 1, ...
Authors:Colletier, J.P, Nasrallah, C.
Deposit date:2017-05-10
Release date:2018-02-21
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3 Å)
Cite:Porin self-association enables cell-to-cell contact in
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
3M20
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BU of 3m20 by Molmil
Crystal structure of DmpI from Archaeoglobus fulgidus determined to 2.37 Angstroms resolution
Descriptor: 4-oxalocrotonate tautomerase, putative
Authors:Hackert, M.L, Whitman, C.P, Almrud, J.J, Dasgupta, R, Kern, A.D.
Deposit date:2010-03-06
Release date:2010-09-01
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.37 Å)
Cite:Kinetic and structural characterization of DmpI from Helicobacter pylori and Archaeoglobus fulgidus, two 4-oxalocrotonate tautomerase family members.
Bioorg.Chem., 38, 2010
3M3K
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BU of 3m3k by Molmil
Ligand binding domain (S1S2) of GluA3 (flop)
Descriptor: GLUTAMIC ACID, Glutamate receptor 3, ZINC ION
Authors:Ahmed, A.H, Ptak, C.P, Oswald, R.E.
Deposit date:2010-03-09
Release date:2010-03-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.793 Å)
Cite:Molecular mechanism of flop selectivity and subsite recognition for an AMPA receptor allosteric modulator: structures of GluA2 and GluA3 in complexes with PEPA.
Biochemistry, 49, 2010
1ERI
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BU of 1eri by Molmil
X-RAY STRUCTURE OF THE DNA-ECO RI ENDONUCLEASE-DNA RECOGNITION COMPLEX: THE RECOGNITION NETWORK AND THE INTEGRATION OF RECOGNITION AND CLEAVAGE
Descriptor: DNA (5'-D(*TP*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'), PROTEIN (ECO RI ENDONUCLEASE (E.C.3.1.21.4))
Authors:Kim, Y, Grable, J.C, Love, R, Greene, P.J, Rosenberg, J.M.
Deposit date:1994-05-18
Release date:1995-02-07
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Refinement of Eco RI endonuclease crystal structure: a revised protein chain tracing.
Science, 249, 1990
5CVB
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BU of 5cvb by Molmil
Crystal structure of the type IX collagen NC2 hetero-trimerization domain with a guest fragment a1a1a1 of type I collagen
Descriptor: Collagen alpha-1(I) chain,Collagen alpha-1(IX) chain, Collagen alpha-1(I) chain,Collagen alpha-2(IX) chain, Collagen alpha-1(I) chain,Collagen alpha-3(IX) chain, ...
Authors:Boudko, S.P, Bachinger, H.P.
Deposit date:2015-07-25
Release date:2016-08-10
Last modified:2017-07-12
Method:X-RAY DIFFRACTION (2.249 Å)
Cite:Structural insight for chain selection and stagger control in collagen.
Sci Rep, 6, 2016
3M54
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BU of 3m54 by Molmil
SET7/9 Y305F in complex with TAF10 peptide and AdoHcy
Descriptor: Histone-lysine N-methyltransferase SETD7, S-ADENOSYL-L-HOMOCYSTEINE, TAF10 peptide
Authors:Del Rizzo, P.A, Couture, J.-F, Roiko, M.S, Strunk, B.S, Brunzelle, J.S, Dirk, L.M, Houtz, R.L, Trievel, R.C.
Deposit date:2010-03-12
Release date:2010-07-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:SET7/9 catalytic mutants reveal the role of active site water molecules in lysine multiple methylation.
J.Biol.Chem., 285, 2010
6NWD
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BU of 6nwd by Molmil
X-ray Crystallographic structure of Gloeobacter rhodopsin
Descriptor: 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, DECANE, DODECANE, ...
Authors:Ernst, O.P, Morizumi, T, Ou, W.L.
Deposit date:2019-02-06
Release date:2019-08-14
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2 Å)
Cite:X-ray Crystallographic Structure and Oligomerization of Gloeobacter Rhodopsin.
Sci Rep, 9, 2019
6NWT
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BU of 6nwt by Molmil
RORgamma Ligand Binding Domain
Descriptor: 1,1,1,3,3,3-hexafluoro-2-[2-fluoro-4'-({4-[(pyridin-4-yl)methyl]piperazin-1-yl}methyl)[1,1'-biphenyl]-4-yl]propan-2-ol, Nuclear receptor ROR-gamma
Authors:Strutzenberg, T.S, Park, H, Griffin, P.R.
Deposit date:2019-02-07
Release date:2019-07-10
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:HDX-MS reveals structural determinants for ROR gamma hyperactivation by synthetic agonists.
Elife, 8, 2019
3M9Q
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BU of 3m9q by Molmil
Drosophila MSL3 chromodomain
Descriptor: Protein male-specific lethal-3
Authors:Kim, D, Huang, P, Rastinejad, F, Khorasanizadeh, S.
Deposit date:2010-03-22
Release date:2010-07-21
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.29 Å)
Cite:Corecognition of DNA and a methylated histone tail by the MSL3 chromodomain.
Nat.Struct.Mol.Biol., 17, 2010
6NXW
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BU of 6nxw by Molmil
Crystal structure of Arabidopsis thaliana cytosolic triosephosphate isomerase C218S mutant
Descriptor: Triosephosphate isomerase, cytosolic
Authors:Jimenez-Sandoval, P, Diaz-Quezada, C, Torres-Larios, A, Brieba, L.G.
Deposit date:2019-02-10
Release date:2020-02-19
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural basis for the modulation of plant cytosolic triosephosphate isomerase activity by mimicry of redox-based modifications.
Plant J., 99, 2019

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