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PDB: 45697 results

6SU8
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Highly thermostable endoglucanase Cel7B
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Glucanase, ...
Authors:Schiano-di-Cola, C, Morth, J.P, Westh, P, Borch, K.
Deposit date:2019-09-13
Release date:2019-11-06
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:Structural and biochemical characterization of a family 7 highly thermostable endoglucanase from the fungus Rasamsonia emersonii.
Febs J., 287, 2020
6VN7
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BU of 6vn7 by Molmil
Cryo-EM structure of an activated VIP1 receptor-G protein complex
Descriptor: CHOLESTEROL, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Duan, J, Shen, D.-D, Zhou, X.E, Liu, Q.-F, Zhuang, Y.-W, Zhang, H.-B, Xu, P.-Y, Ma, S.-S, He, X.-H, Melcher, K, Zhang, Y, Xu, H.E, Yi, J.
Deposit date:2020-01-29
Release date:2020-09-02
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Cryo-EM structure of an activated VIP1 receptor-G protein complex revealed by a NanoBiT tethering strategy.
Nat Commun, 11, 2020
8D4B
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BU of 8d4b by Molmil
Structure of Cas12a2 ternary complex
Descriptor: OrfB_Zn_ribbon domain-containing protein, RNA (28-MER), RNA (41-MER)
Authors:Bravo, J.P.K, Taylor, D.W.
Deposit date:2022-06-01
Release date:2023-01-18
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (2.92 Å)
Cite:RNA targeting unleashes indiscriminate nuclease activity of CRISPR-Cas12a2.
Nature, 613, 2023
6VN2
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USP7 IN COMPLEX WITH LIGAND COMPOUND 18
Descriptor: 1-({7-[(2R)-5-chloro-2-(piperazine-1-carbonyl)-2,3-dihydro-1-benzofuran-7-yl]thieno[3,2-b]pyridin-2-yl}methyl)-1H-pyrrole-2,5-dione, ACETATE ION, Ubiquitin carboxyl-terminal hydrolase 7
Authors:Leger, P.R, Wustrow, D.J, Hu, D.X, Krapp, S, Maskos, K, Blaesse, M.
Deposit date:2020-01-29
Release date:2020-04-29
Last modified:2020-06-17
Method:X-RAY DIFFRACTION (2.93 Å)
Cite:Discovery of Potent, Selective, and Orally Bioavailable Inhibitors of USP7 with In Vivo Antitumor Activity.
J.Med.Chem., 63, 2020
8FRH
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BU of 8frh by Molmil
Apo structure of D59C mutant of a melibiose transporter
Descriptor: Melibiose permease, PENTAETHYLENE GLYCOL
Authors:Guan, L, Hariharan, P.
Deposit date:2023-01-06
Release date:2024-06-05
Method:X-RAY DIFFRACTION (3.18 Å)
Cite:Apo structure of D59C mutant of a melibiose transporter
To Be Published
7T1C
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BU of 7t1c by Molmil
Crystal structure of RUBISCO from Sulfurivirga caldicuralii
Descriptor: Ribulose-bisphosphate carboxylase
Authors:Pereira, J.H, Liu, A.K, Shih, P.M, Adams, P.D.
Deposit date:2021-12-01
Release date:2022-09-07
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Structural plasticity enables evolution and innovation of RuBisCO assemblies.
Sci Adv, 8, 2022
7PJN
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BU of 7pjn by Molmil
Crystal Structure of Ivosidenib-resistant IDH1 variant R132C S280F in complex with NADPH and inhibitor DS-1001B
Descriptor: (E)-3-(1-(5-(2-fluoropropan-2-yl)-3-(2,4,6-trichlorophenyl)isoxazole-4-carbonyl)-3-methyl-1H-indol-4-yl)acrylic acid, CITRIC ACID, GLYCEROL, ...
Authors:Reinbold, R, Rabe, P, Abboud, M.I, Schofield, C.J, Clifton, I.J.
Deposit date:2021-08-24
Release date:2022-07-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Resistance to the isocitrate dehydrogenase 1 mutant inhibitor ivosidenib can be overcome by alternative dimer-interface binding inhibitors.
Nat Commun, 13, 2022
5M33
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BU of 5m33 by Molmil
Structural tuning of CD81LEL (space group P21)
Descriptor: 1,2-ETHANEDIOL, CD81 antigen
Authors:Cunha, E.S, Sfriso, P, Rojas, A.L, Roversi, P, Hospital, A, Orozco, M, Abrescia, N.G.
Deposit date:2016-10-14
Release date:2016-12-14
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.28 Å)
Cite:Mechanism of Structural Tuning of the Hepatitis C Virus Human Cellular Receptor CD81 Large Extracellular Loop.
Structure, 25, 2017
7ZSL
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BU of 7zsl by Molmil
human purine nucleoside phosphorylase in complex with JS-196
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Purine nucleoside phosphorylase, ...
Authors:Djukic, S, Pachl, P, Rezacova, P.
Deposit date:2022-05-07
Release date:2023-05-17
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Design, Synthesis, Biological Evaluation, and Crystallographic Study of Novel Purine Nucleoside Phosphorylase Inhibitors.
J.Med.Chem., 66, 2023
6SM0
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BU of 6sm0 by Molmil
Venus 66 p-Azido-L-Phenylalanin (azF) variant, dark grown
Descriptor: Green fluorescent protein, OXYGEN MOLECULE, SULFATE ION, ...
Authors:Rizkallah, P.J, Al Maslookhi, H.S, Jones, D.D.
Deposit date:2019-08-21
Release date:2021-02-17
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Stalling chromophore synthesis of the fluorescent protein Venus reveals the molecular basis of the final oxidation step.
Chem Sci, 12, 2021
5M3T
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BU of 5m3t by Molmil
Structural tuning of CD81LEL (space group P64)
Descriptor: 1,2-ETHANEDIOL, CD81 antigen, CHLORIDE ION
Authors:Cunha, E.S, Sfriso, P, Rojas, A.L, Roversi, P, Hospital, A, Orozco, M, Abrescia, N.G.
Deposit date:2016-10-17
Release date:2016-12-14
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.021 Å)
Cite:Mechanism of Structural Tuning of the Hepatitis C Virus Human Cellular Receptor CD81 Large Extracellular Loop.
Structure, 25, 2017
5M4B
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BU of 5m4b by Molmil
Alpha-amino epsilon-caprolactam racemase D210A mutant in complex with PLP and geminal diamine intermediate
Descriptor: 1,2-ETHANEDIOL, Aminotransferase class-III, [6-methyl-5-oxidanyl-4-[(~{E})-[(3~{R})-2-oxidanylideneazepan-3-yl]iminomethyl]pyridin-3-yl]methyl dihydrogen phosphate
Authors:Frese, A, Sutton, P.W, Turkenburg, J.P, Grogan, G.
Deposit date:2016-10-18
Release date:2017-04-19
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Snapshots of the Catalytic Cycle of the Industrial Enzyme alpha-Amino-epsilon-Caprolactam Racemase (ACLR) Observed Using X-ray Crystallography
Acs Catalysis, 7, 2017
5LYE
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BU of 5lye by Molmil
Re-refined structure of the bacteriophage T4 short tail fibre PDB entry 1H6W containing 71 additionally identified residues
Descriptor: CHLORIDE ION, Gp12, SULFATE ION
Authors:van Raaij, M.J, Taylor, N.M.I, Leiman, P.G.
Deposit date:2016-09-27
Release date:2018-01-17
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Contractile injection systems of bacteriophages and related systems.
Mol. Microbiol., 108, 2018
5HDV
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BU of 5hdv by Molmil
BACE-1 incomplex with (7aR)-7a-(5-cyanothiophen-2-yl)-6-(5-fluoro-4-methoxy-6-methylpyrimidin-2-yl)-3-methyl-4-oxooctahydro-2H-pyrrolo[3,4-d]pyrimidin-2-iminium
Descriptor: 5-[(2E,4aR,7aR)-6-(5-fluoro-4-methoxy-6-methylpyrimidin-2-yl)-2-imino-3-methyl-4-oxooctahydro-7aH-pyrrolo[3,4-d]pyrimidin-7a-yl]thiophene-2-carbonitrile, Beta-secretase 1, L(+)-TARTARIC ACID
Authors:Orth, P.
Deposit date:2016-01-05
Release date:2016-03-16
Last modified:2016-04-27
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Structure-Based Design of an Iminoheterocyclic beta-Site Amyloid Precursor Protein Cleaving Enzyme (BACE) Inhibitor that Lowers Central A beta in Nonhuman Primates.
J.Med.Chem., 59, 2016
6MYR
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BU of 6myr by Molmil
Avian mitochondrial complex II with thiapronil bound
Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, DI(HYDROXYETHYL)ETHER, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Huang, L.-S, Luemmen, P, Berry, E.A.
Deposit date:2018-11-02
Release date:2019-10-16
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystallographic investigation of the ubiquinone binding site of respiratory Complex II and its inhibitors.
Biochim Biophys Acta Proteins Proteom, 1869, 2021
7N6D
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BU of 7n6d by Molmil
HLA peptide complex
Descriptor: 1,2-ETHANEDIOL, Beta-2-microglobulin, MHC class I antigen, ...
Authors:Chaurasia, P, Petersen, J, Rossjohn, J.
Deposit date:2021-06-08
Release date:2021-07-28
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis of biased T cell receptor recognition of an immunodominant HLA-A2 epitope of the SARS-CoV-2 spike protein.
J.Biol.Chem., 297, 2021
5MIP
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BU of 5mip by Molmil
Crystal Structure of Lactococcus lactis Thioredoxin Reductase Exposed to Visible Light (30 min)
Descriptor: DI(HYDROXYETHYL)ETHER, FLAVIN-ADENINE DINUCLEOTIDE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Skjoldager, N, Bang, M.B, Svensson, B, Hagglund, P, Harris, P.
Deposit date:2016-11-29
Release date:2017-04-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2 Å)
Cite:The structure of Lactococcus lactis thioredoxin reductase reveals molecular features of photo-oxidative damage.
Sci Rep, 7, 2017
8DFS
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BU of 8dfs by Molmil
type I-C Cascade bound to AcrIF2
Descriptor: Anti-CRISPR protein 30, CRISPR-associated protein, CT1133 family, ...
Authors:O'Brien, R.E, Bravo, J.P.K, Ramos, D, Hibshman, G.N, Wright, J.T, Taylor, D.W.
Deposit date:2022-06-22
Release date:2023-02-22
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural snapshots of R-loop formation by a type I-C CRISPR Cascade.
Mol.Cell, 83, 2023
8DJG
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BU of 8djg by Molmil
ADGRL3-lectin domain in complex with an activating synthetic antibody fragment
Descriptor: DI(HYDROXYETHYL)ETHER, GLYCEROL, Isoform 2 of Adhesion G protein-coupled receptor L3, ...
Authors:Kordon, S.P, Bandekar, S.J, Arac, D.
Deposit date:2022-06-30
Release date:2023-02-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Isoform- and ligand-specific modulation of the adhesion GPCR ADGRL3/Latrophilin3 by a synthetic binder.
Nat Commun, 14, 2023
5MSZ
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BU of 5msz by Molmil
Lytic Polysaccharide Monooxygenase AA15 from Thermobia domestica in the Cu(I) State
Descriptor: 1,2-ETHANEDIOL, COPPER (I) ION, Thermobia domestica domestica AA15
Authors:Hemsworth, G.R, Sabbadin, F, Ciano, L, Henrissat, B, Dupree, P, Tryfona, T, Besser, K, Elias, L, Pesante, G, Li, Y, Dowle, A, Bates, R, Gomez, L, Hallam, R, Davies, G.J, Walton, P.H, Bruce, N.C, McQueen-Mason, S.
Deposit date:2017-01-06
Release date:2018-02-28
Last modified:2018-03-07
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:An ancient family of lytic polysaccharide monooxygenases with roles in arthropod development and biomass digestion.
Nat Commun, 9, 2018
6ZYS
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BU of 6zys by Molmil
Structure of IMP-1 with 2-Mercaptomethyl-thiazolidine D-syn-1b
Descriptor: (2~{S},4~{S})-2-ethoxycarbonyl-5,5-dimethyl-2-(sulfanylmethyl)-1,3-thiazolidine-4-carboxylic acid, 1,2-ETHANEDIOL, Beta-lactamase IMP-1, ...
Authors:Hinchliffe, P, Spencer, J.
Deposit date:2020-08-02
Release date:2021-01-20
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.87000954 Å)
Cite:2-Mercaptomethyl-thiazolidines use conserved aromatic-S interactions to achieve broad-range inhibition of metallo-beta-lactamases.
Chem Sci, 12, 2021
8DFO
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BU of 8dfo by Molmil
type I-C Cascade bound to AcrIC4
Descriptor: AcrIC4, CRISPR-associated protein, CT1133 family, ...
Authors:O'Brien, R.E, Bravo, J.P.K, Ramos, D, Hibshman, G.N, Wright, J.T, Taylor, D.W.
Deposit date:2022-06-22
Release date:2023-02-15
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural snapshots of R-loop formation by a type I-C CRISPR Cascade.
Mol.Cell, 83, 2023
7A6E
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BU of 7a6e by Molmil
Nanodisc reconstituted human ABCB1 in complex with MRK16 Fab and tariquidar
Descriptor: CHOLESTEROL, MRK16 Fab-fragment heavy chain, MRK16 Fab-fragment light chain, ...
Authors:Nosol, K, Locher, K.P.
Deposit date:2020-08-25
Release date:2020-10-14
Last modified:2020-10-28
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Cryo-EM structures reveal distinct mechanisms of inhibition of the human multidrug transporter ABCB1.
Proc.Natl.Acad.Sci.USA, 117, 2020
7NSX
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BU of 7nsx by Molmil
Drosophila PGRP-LB wild-type
Descriptor: Isoform A of Peptidoglycan-recognition protein LB, ZINC ION
Authors:Orlans, J, Aller, P, Da Silva, P.
Deposit date:2021-03-08
Release date:2021-05-19
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:PGRP-LB: An Inside View into the Mechanism of the Amidase Reaction.
Int J Mol Sci, 22, 2021
7O6E
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BU of 7o6e by Molmil
2.12 A cryo-EM structure of Mycobacterium tuberculosis Ferritin
Descriptor: Ferritin BfrB
Authors:Gijsbers, A, Zhang, Y, Gao, Y, Peters, P.J, Ravelli, R.B.G.
Deposit date:2021-04-10
Release date:2021-05-19
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (2.1 Å)
Cite:Mycobacterium tuberculosis ferritin: a suitable workhorse protein for cryo-EM development.
Acta Crystallogr D Struct Biol, 77, 2021

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