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PDB: 45955 results

4R5M
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BU of 4r5m by Molmil
Crystal structure of Vc-Aspartate beta-semialdehyde-dehydrogenase with NADP and 4-Nitro-2-Phosphono-Benzoic acid
Descriptor: 4-nitro-2-phosphonobenzoic acid, Aspartate-semialdehyde dehydrogenase 1, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Pavlovsky, A.G, Thangavelu, B, Bhansali, P, Viola, R.E.
Deposit date:2014-08-21
Release date:2014-12-10
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:A cautionary tale of structure-guided inhibitor development against an essential enzyme in the aspartate-biosynthetic pathway.
Acta Crystallogr.,Sect.D, 70, 2014
3RUQ
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Crystal structure of Cpn-WT in complex with ADP from Methanococcus maripaludis
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Chaperonin, MAGNESIUM ION
Authors:Pereira, J.H, Ralston, C.Y, Douglas, N.R, Kumar, R, McAndrew, R.P, Knee, K.M, Frydman, J, Adams, P.D.
Deposit date:2011-05-05
Release date:2012-01-04
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.798 Å)
Cite:Mechanism of nucleotide sensing in group II chaperonins.
Embo J., 31, 2012
5IPX
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BU of 5ipx by Molmil
Structure of ORF49 from KSHV
Descriptor: ORF49 protein, SULFATE ION
Authors:Hew, K, Nordlund, P.
Deposit date:2016-03-10
Release date:2016-11-16
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of the Open Reading Frame 49 Protein Encoded by Kaposi's Sarcoma-Associated Herpesvirus.
J. Virol., 91, 2017
4LBY
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BU of 4lby by Molmil
Identifying ligand binding hot spots in proteins using brominated fragments
Descriptor: AMMONIUM ION, Elongation factor Tu-A, MAGNESIUM ION, ...
Authors:Groftehauge, M.K, Therkelsen, M, Taaning, R, Skrydstrup, T, Morth, J.P, Nissen, P.
Deposit date:2013-06-21
Release date:2013-09-11
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.692 Å)
Cite:Identifying ligand-binding hot spots in proteins using brominated fragments.
Acta Crystallogr.,Sect.F, 69, 2013
7JUV
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BU of 7juv by Molmil
Crystal Structure of KSR2:MEK1 in complex with AMP-PNP, and allosteric MEK inhibitor APS-9-95-1
Descriptor: Dual specificity mitogen-activated protein kinase kinase 1, Kinase suppressor of Ras 2, MAGNESIUM ION, ...
Authors:Khan, Z.M, Dar, A.C, Scopton, A.P.
Deposit date:2020-08-20
Release date:2020-09-30
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.36 Å)
Cite:Structural basis for the action of the drug trametinib at KSR-bound MEK.
Nature, 588, 2020
1PGG
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BU of 1pgg by Molmil
PROSTAGLANDIN H2 SYNTHASE-1 COMPLEXED WITH 1-(4-IODOBENZOYL)-5-METHOXY-2-METHYLINDOLE-3-ACETIC ACID (IODOINDOMETHACIN), TRANS MODEL
Descriptor: 1-(4-IODOBENZOYL)-5-METHOXY-2-METHYL INDOLE-3-ACETIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Loll, P.J, Picot, D, Garavito, R.M.
Deposit date:1995-12-02
Release date:1997-01-11
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (4.5 Å)
Cite:Synthesis and use of iodinated nonsteroidal antiinflammatory drug analogs as crystallographic probes of the prostaglandin H2 synthase cyclooxygenase active site.
Biochemistry, 35, 1996
2Y46
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BU of 2y46 by Molmil
Structure of the mixed-function P450 MycG in complex with mycinamicin IV in C 2 2 21 space group
Descriptor: BENZAMIDINE, GLYCEROL, MYCINAMICIN IV, ...
Authors:Li, S, Kells, P.M, Sherman, D.H, Podust, L.M.
Deposit date:2011-01-05
Release date:2012-01-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Substrate Recognition by the Multifunctional Cytochrome P450 Mycg in Mycinamicin Hydroxylation and Epoxidation Reactions.
J.Biol.Chem., 287, 2012
4LB4
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Crystal structure of human AR complexed with NADP+ and {2-[(4-bromo-2,3,5,6-tetrafluorobenzyl)carbamoyl]-5-chlorophenoxy}acetic acid
Descriptor: Aldose reductase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, {2-[(4-bromo-2,3,5,6-tetrafluorobenzyl)carbamoyl]-5-chlorophenoxy}acetic acid
Authors:Cousido-Siah, A, Mitschler, A, Ruiz, F.X, Fanfrlik, J, Kolar, M, Hobza, P, Podjarny, A.
Deposit date:2013-06-20
Release date:2014-04-30
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (0.8 Å)
Cite:Modulation of aldose reductase inhibition by halogen bond tuning.
Acs Chem.Biol., 8, 2013
2Y05
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BU of 2y05 by Molmil
Crystal structure of human leukotriene B4 12-hydroxydehydrogenase in complex with NADP and raloxifene
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Yue, W.W, Shafqat, N, Krojer, T, Pike, A.C.W, von Delft, F, Sethi, R, Savitsky, P, Johansson, C, Arrowsmith, C, Weigelt, J, Edwards, A, Bountra, C, Oppermann, U.
Deposit date:2010-11-30
Release date:2011-01-26
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of Human Leukotriene B4 12-Hydroxydehydrogenase in Complex with Nadp and Raloxifene
To be Published
2N2A
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BU of 2n2a by Molmil
Spatial structure of HER2/ErbB2 dimeric transmembrane domain in the presence of cytoplasmic juxtamembrane domains
Descriptor: Receptor tyrosine-protein kinase erbB-2
Authors:Bragin, P.E, Mineev, K.S, Bocharov, E, Bocharova, O, Arseniev, A.
Deposit date:2015-05-05
Release date:2016-02-24
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:HER2 Transmembrane Domain Dimerization Coupled with Self-Association of Membrane-Embedded Cytoplasmic Juxtamembrane Regions.
J.Mol.Biol., 428, 2016
3RUS
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BU of 3rus by Molmil
Crystal structure of Cpn-rls in complex with ADP from Methanococcus maripaludis
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Chaperonin, MAGNESIUM ION, ...
Authors:Pereira, J.H, Ralston, C.Y, Douglas, N.R, Kumar, R, McAndrew, R.P, Knee, K.M, King, J.A, Frydman, J, Adams, P.D.
Deposit date:2011-05-05
Release date:2012-01-04
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.338 Å)
Cite:Mechanism of nucleotide sensing in group II chaperonins.
Embo J., 31, 2012
7K4Q
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BU of 7k4q by Molmil
Crystal structure of Kemp Eliminase HG3 in complex with the transition state analog 6-nitrobenzotriazole
Descriptor: 6-NITROBENZOTRIAZOLE, Endo-1,4-beta-xylanase, SULFATE ION
Authors:Padua, R.A.P, Otten, R, Bunzel, A, Nguyen, V, Pitsawong, W, Patterson, M, Sui, S, Perry, S.L, Cohen, A.E, Hilvert, D, Kern, D.
Deposit date:2020-09-16
Release date:2020-12-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.28 Å)
Cite:How directed evolution reshapes the energy landscape in an enzyme to boost catalysis.
Science, 370, 2020
7K4V
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Crystal structure of Kemp Eliminase HG3.17
Descriptor: Endo-1,4-beta-xylanase, TETRAETHYLENE GLYCOL
Authors:Padua, R.A.P, Otten, R, Bunzel, A, Nguyen, V, Pitsawong, W, Patterson, M, Sui, S, Perry, S.L, Cohen, A.E, Hilvert, D, Kern, D.
Deposit date:2020-09-16
Release date:2020-12-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:How directed evolution reshapes the energy landscape in an enzyme to boost catalysis.
Science, 370, 2020
4IHM
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BU of 4ihm by Molmil
G215S, A251G, T257A, D260G, T262D mutant of carboxypeptidase T from Thermoactinomyces vulgaris
Descriptor: CALCIUM ION, Carboxypeptidase T, GLYCEROL, ...
Authors:Timofeev, V.I, Kuznetsov, S.A, Akparov, V.K, Kuranova, I.P.
Deposit date:2012-12-19
Release date:2013-12-25
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.29 Å)
Cite:G215S, A251G, T257A, D260G, T262D mutant of carboxypeptidase T from Thermoactinomyces vulgaris
To be published
4B9H
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Cladosporium fulvum LysM effector Ecp6 in complex with a beta-1,4- linked N-acetyl-D-glucosamine tetramer: I3C heavy atom derivative
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose, ...
Authors:Saleem-Batcha, R, Sanchez-Vallet, A, Hansen, G, Thomma, B.P.H.J, Mesters, J.R.
Deposit date:2012-09-04
Release date:2013-07-17
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Fungal Effector Ecp6 Outcompetes Host Immune Receptor for Chitin Binding Through Intrachain Lysm Dimerization
Elife, 2, 2013
1W03
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BU of 1w03 by Molmil
Isopenicillin N Synthase Aminoadipoyl-Cysteinyl-Glycine-Fe Complex
Descriptor: DELTA-(L-ALPHA-AMINOADIPOYL)-L-CYSTEINYL-GLYCINE, FE (II) ION, ISOPENICILLIN N SYNTHETASE, ...
Authors:Long, A.J, Clifton, I.J, Rutledge, P.J.
Deposit date:2004-06-01
Release date:2005-05-04
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Studies on the Reaction of Isopenicillin N Synthase with the Truncated Substrate Analogues Delta-(L-Alpha-Aminoadipoyl)-L-Cysteinyl-Glycine and Delta-(L-Alpha-Aminoadipoyl)-L-Cysteinyl-D- Alanine
Biochemistry, 44, 2005
1W05
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BU of 1w05 by Molmil
Isopenicillin N Synthase Aminoadipoyl-Cysteinyl-Alanine-Fe Complex
Descriptor: DELTA-(L-ALPHA-AMINOADIPOYL)-L-CYSTEINYL-D-ALANINE, FE (II) ION, ISOPENICILLIN N SYNTHETASE, ...
Authors:Long, A.J, Clifton, I.J, Rutledge, P.J.
Deposit date:2004-06-01
Release date:2005-05-04
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Structural Studies on the Reaction of Isopenicillin N Synthase with the Truncated Substrate Analogues Delta-(L-Alpha-Aminoadipoyl)-L-Cysteinyl-Glycine and Delta-(L-Alpha-Aminoadipoyl)-L-Cysteinyl-D- Alanine
Biochemistry, 44, 2005
4R8H
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BU of 4r8h by Molmil
The role of protein-ligand contacts in allosteric regulation of the Escherichia coli Catabolite Activator Protein
Descriptor: 6-(6-AMINO-PURIN-9-YL)-2-THIOXO-TETRAHYDRO-2-FURO[3,2-D][1,3,2]DIOXAPHOSPHININE-2,7-DIOL, GLYCEROL, cAMP-activated global transcriptional regulator CRP
Authors:Townsend, P.D, Pohl, E, McLeish, T.C.B, Rodgers, T.L, Glover, L.C, Korhonen, H.J, Wilson, M.R, Hodgson, D.R.W, Cann, M.J.
Deposit date:2014-09-02
Release date:2015-07-22
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:The Role of Protein-Ligand Contacts in Allosteric Regulation of the Escherichia coli Catabolite Activator Protein.
J.Biol.Chem., 290, 2015
4LMX
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BU of 4lmx by Molmil
Light harvesting complex PE555 from the cryptophyte Hemiselmis andersenii CCMP644
Descriptor: 15,16-DIHYDROBILIVERDIN, PHYCOERYTHROBILIN, cryptophyte phycoerythrin (alpha-1 chain), ...
Authors:Harrop, S.J, Wilk, K.E, Curmi, P.M.G.
Deposit date:2013-07-11
Release date:2014-06-18
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Single-residue insertion switches the quaternary structure and exciton states of cryptophyte light-harvesting proteins.
Proc.Natl.Acad.Sci.USA, 111, 2014
4IN7
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BU of 4in7 by Molmil
(M)L214N mutant of the Rhodobacter sphaeroides Reaction Center
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, BACTERIOCHLOROPHYLL A, BACTERIOPHEOPHYTIN A, ...
Authors:Saer, R.G, Hardjasa, A, Murphy, M.E.P, Beatty, J.T.
Deposit date:2013-01-04
Release date:2013-06-05
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Role of Rhodobacter sphaeroides photosynthetic reaction center residue M214 in the composition, absorbance properties, and conformations of H(A) and B(A) cofactors.
Biochemistry, 52, 2013
1VYM
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BU of 1vym by Molmil
NATIVE HUMAN PCNA
Descriptor: PROLIFERATING CELL NUCLEAR ANTIGEN
Authors:Kontopidis, G, Wu, S, Zheleva, D, Taylor, P, Mcinnes, C, Lane, D, Fischer, P, Walkinshaw, M.
Deposit date:2004-05-03
Release date:2005-01-13
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural and Biochemical Studies of Human Proliferating Cell Nuclear Antigen Complexes Provide a Rationale for Cyclin Association and Inhibitor Design
Proc.Natl.Acad.Sci.USA, 102, 2005
1HRQ
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BU of 1hrq by Molmil
THE THREE-DIMENSIONAL SOLUTION STRUCTURE OF THE REDUCED HIGH-POTENTIAL IRON-SULFUR PROTEIN FROM CHROMATIUM VINOSUM THROUGH NMR
Descriptor: HIGH POTENTIAL IRON SULFUR PROTEIN, IRON/SULFUR CLUSTER
Authors:Banci, L, Bertini, I, Dikiy, A, Kastrau, D.H.W, Luchinat, C, Sompornpisut, P.
Deposit date:1995-01-17
Release date:1995-06-03
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:The three-dimensional solution structure of the reduced high-potential iron-sulfur protein from Chromatium vinosum through NMR.
Biochemistry, 34, 1995
1HRR
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BU of 1hrr by Molmil
THE THREE DIMENSIONAL STRUCTURE OF THE REDUCED HIGH POTENTIAL IRON-SULFUR PROTEIN FROM CHROMATIUM VINOSUM THROUGH NMR
Descriptor: IRON/SULFUR CLUSTER, REDUCED HIGH POTENTIAL IRON SULFUR PROTEIN
Authors:Banci, L, Bertini, I, Dikiy, A, Kastrau, D.H.W, Luchinat, C, Sompornpisut, P.
Deposit date:1995-01-17
Release date:1995-07-31
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:The three-dimensional solution structure of the reduced high-potential iron-sulfur protein from Chromatium vinosum through NMR.
Biochemistry, 34, 1995
4IOD
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BU of 4iod by Molmil
Preliminary structural investigations of a malarial protein secretion system.
Descriptor: Malarial CLP B2 atpase/HSP101 protein, SULFATE ION
Authors:Egea, P.F.
Deposit date:2013-01-07
Release date:2014-04-23
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural mapping of the ClpB ATPases of Plasmodium falciparum: Targeting protein folding and secretion for antimalarial drug design.
Protein Sci., 24, 2015
4ICD
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BU of 4icd by Molmil
REGULATION OF ISOCITRATE DEHYDROGENASE BY PHOSPHORYLATION INVOLVES NO LONG-RANGE CONFORMATIONAL CHANGE IN THE FREE ENZYME
Descriptor: PHOSPHORYLATED ISOCITRATE DEHYDROGENASE
Authors:Hurley, J.H, Dean, A.M, Thorsness, P.E, Koshlandjunior, D.E, Stroud, R.M.
Deposit date:1989-12-28
Release date:1991-01-15
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Regulation of isocitrate dehydrogenase by phosphorylation involves no long-range conformational change in the free enzyme.
J.Biol.Chem., 265, 1990

224004

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