Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 45955 件

8UOA
DownloadVisualize
BU of 8uoa by Molmil
Structure of the synaptic vesicle protein 2A Luminal domain in complex with a nanobody
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Nanobody, Synaptic vesicle glycoprotein 2A, ...
著者Mittal, A, Martin, M.F, Levin, E, Adams, C, Yang, M, Ledecq, M, Horanyi, P.S, Coleman, J.A.
登録日2023-10-19
公開日2024-05-22
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structures of synaptic vesicle protein 2A and 2B bound to anticonvulsants.
Nat.Struct.Mol.Biol., 2024
6MEG
DownloadVisualize
BU of 6meg by Molmil
Crystal structure of human monoclonal antibody HEPC46
分子名称: antibody HEPC46 Heavy Chain, antibody HEPC46 Light Chain
著者Flyak, A.I, Bjorkman, P.J.
登録日2018-09-06
公開日2018-11-21
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.41 Å)
主引用文献HCV Broadly Neutralizing Antibodies Use a CDRH3 Disulfide Motif to Recognize an E2 Glycoprotein Site that Can Be Targeted for Vaccine Design.
Cell Host Microbe, 24, 2018
8V4Q
DownloadVisualize
BU of 8v4q by Molmil
Myxococcus xanthus EncA 3xHis pore mutant with tetrahedral symmetry
分子名称: Type 1 encapsulin shell protein EncA
著者Szyszka, T.N, Andreas, M.P, Lie, F, Miller, L.M, Adamson, L.S.R, Fatehi, F, Twarock, R, Draper, B.E, Jarrold, M.F, Giessen, T.W, Lau, Y.H.
登録日2023-11-29
公開日2024-05-22
実験手法ELECTRON MICROSCOPY (2.71 Å)
主引用文献Point mutation in a virus-like capsid drives symmetry reduction to form tetrahedral cages.
Proc.Natl.Acad.Sci.USA, 121, 2024
8U3E
DownloadVisualize
BU of 8u3e by Molmil
Structure of Apo Sialin at pH5.0
分子名称: Sialin
著者Schmiege, P, Li, X.
登録日2023-09-07
公開日2024-05-29
実験手法ELECTRON MICROSCOPY (3.19 Å)
主引用文献Structure of Apo Sialin at pH5.0
To Be Published
7XPE
DownloadVisualize
BU of 7xpe by Molmil
Cryo-EM structure of the T=4 lake sinai virus 2 virus-like capsid at pH 8.5
分子名称: Capsid protein alpha
著者Chen, N.C, Wang, C.H, Chen, C.J, Yoshimura, M, Guan, H.H, Chuankhayan, P, Lin, C.C.
登録日2022-05-04
公開日2023-02-08
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (3.32 Å)
主引用文献Structures of honeybee-infecting Lake Sinai virus reveal domain functions and capsid assembly with dynamic motions.
Nat Commun, 14, 2023
6F2Q
DownloadVisualize
BU of 6f2q by Molmil
Neutron crystal structure of perdeuterated galectin-3C in the ligand-free form
分子名称: Galectin-3
著者Manzoni, F, Blakeley, M.P, Oksanen, E, Logan, D.T.
登録日2017-11-27
公開日2018-05-02
最終更新日2024-05-01
実験手法NEUTRON DIFFRACTION (1.03 Å), X-RAY DIFFRACTION
主引用文献Elucidation of Hydrogen Bonding Patterns in Ligand-Free, Lactose- and Glycerol-Bound Galectin-3C by Neutron Crystallography to Guide Drug Design.
J. Med. Chem., 61, 2018
7XGZ
DownloadVisualize
BU of 7xgz by Molmil
Cryo-EM structure of the T=4 lake sinai virus 2 virus-like capsid at pH 7.5
分子名称: Capsid protein alpha
著者Chen, N.C, Wang, C.H, Chen, C.J, Yoshimura, M, Guan, H.H, Chuankhayan, P, Lin, C.C.
登録日2022-04-07
公開日2023-02-08
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (3.24 Å)
主引用文献Structures of honeybee-infecting Lake Sinai virus reveal domain functions and capsid assembly with dynamic motions
Nat Commun, 14, 2023
5EL9
DownloadVisualize
BU of 5el9 by Molmil
A. thaliana IGPD2 in complex with the triazole-phosphonate inhibitor, (S)-C348, to 1.1A resolution
分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Imidazoleglycerol-phosphate dehydratase 2, ...
著者Bisson, C, Britton, K.L, Sedelnikova, S.E, Rodgers, H.F, Eadsforth, T.C, Viner, R.C, Hawkes, T.R, Baker, P.J, Rice, D.W.
登録日2015-11-04
公開日2016-10-05
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Mirror-Image Packing Provides a Molecular Basis for the Nanomolar Equipotency of Enantiomers of an Experimental Herbicide.
Angew.Chem.Int.Ed.Engl., 55, 2016
7XPA
DownloadVisualize
BU of 7xpa by Molmil
Cryo-EM structure of the T=3 lake sinai virus 2 virus-like capsid at pH 7.5
分子名称: Capsid protein alpha
著者Chen, N.C, Wang, C.H, Chen, C.J, Yoshimura, M, Guan, H.H, Chuankhayan, P, Lin, C.C.
登録日2022-05-04
公開日2023-02-08
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (3.33 Å)
主引用文献Structures of honeybee-infecting Lake Sinai virus reveal domain functions and capsid assembly with dynamic motions.
Nat Commun, 14, 2023
7XPB
DownloadVisualize
BU of 7xpb by Molmil
Cryo-EM structure of the T=4 lake sinai virus 2 virus-like capsid at pH 6.5
分子名称: Capsid protein alpha
著者Chen, N.C, Wang, C.H, Chen, C.J, Yoshimura, M, Guan, H.H, Chuankhayan, P, Lin, C.C.
登録日2022-05-04
公開日2023-02-08
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (3.91 Å)
主引用文献Structures of honeybee-infecting Lake Sinai virus reveal domain functions and capsid assembly with dynamic motions.
Nat Commun, 14, 2023
5EFV
DownloadVisualize
BU of 5efv by Molmil
The host-recognition device of Staphylococcus aureus phage Phi11
分子名称: FE (III) ION, Phi ETA orf 56-like protein
著者Koc, C, Kuhner, P, Xia, G, Spinelli, S, Roussel, A, Cambillau, C, Stehle, T.
登録日2015-10-26
公開日2016-05-25
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure of the host-recognition device of Staphylococcus aureus phage 11.
Sci Rep, 6, 2016
5NJM
DownloadVisualize
BU of 5njm by Molmil
Lysozyme room-temperature structure determined by serial millisecond crystallography
分子名称: Lysozyme C
著者Weinert, T, Vera, L, Marsh, M, James, D, Gashi, D, Nogly, P, Jaeger, K, Standfuss, J.
登録日2017-03-29
公開日2017-09-27
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Serial millisecond crystallography for routine room-temperature structure determination at synchrotrons.
Nat Commun, 8, 2017
8BXP
DownloadVisualize
BU of 8bxp by Molmil
SfGFP C148 F206 mutant
分子名称: Green fluorescent protein
著者Ahmed, R.D, Rizkallah, P.J, Jones, D.D.
登録日2022-12-09
公開日2023-12-20
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献SfGFP C148 F206 mutant
To Be Published
8U3D
DownloadVisualize
BU of 8u3d by Molmil
Structure of Apo Sialin at pH7.5
分子名称: Sialin
著者Schmiege, P, Li, X.
登録日2023-09-07
公開日2024-05-29
実験手法ELECTRON MICROSCOPY (2.83 Å)
主引用文献Structure of Apo Sialin at pH7.5
To Be Published
6HV2
DownloadVisualize
BU of 6hv2 by Molmil
MMP-13 in complex with the peptide IMISF
分子名称: CALCIUM ION, Collagenase 3, GLYCEROL, ...
著者Mittl, P, Riedl, R, Hohl, D.
登録日2018-10-10
公開日2019-01-30
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.709 Å)
主引用文献Drug Design Inspired by Nature: Crystallographic Detection of an Auto-Tailored Protease Inhibitor Template.
Angew.Chem.Int.Ed.Engl., 58, 2019
4QGO
DownloadVisualize
BU of 4qgo by Molmil
Crystal structure of NucA from Streptococcus agalactiae with no metal bound
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, DNA-entry nuclease (Competence-specific nuclease), ...
著者Pedersen, L.C, Moon, A.F, Gaudu, P.
登録日2014-05-23
公開日2014-11-19
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural characterization of the virulence factor nuclease A from Streptococcus agalactiae.
Acta Crystallogr.,Sect.D, 70, 2014
7XF3
DownloadVisualize
BU of 7xf3 by Molmil
The structure of HLA-B*1501/BM58-66AF9
分子名称: 9-mer peptide from Matrix protein 1, Beta-2-microglobulin, MHC class I antigen
著者Zhao, Y.Z, Xiao, W.L, Wu, Y.N, Fan, W.F, Yue, C, Zhang, Q.X, Zhang, D.N, Yuan, X.J, Yao, S.J, Liu, S, Li, M, Wang, P.Y, Zhang, H.J, Zhang, J, Zhao, M, Zheng, X.Q, Liu, W.J, Gao, G.F, Liu, W.L.
登録日2022-03-31
公開日2023-02-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Parallel T Cell Immunogenic Regions in Influenza B and A Viruses with Distinct Nuclear Export Signal Functions: The Balance between Viral Life Cycle and Immune Escape.
J Immunol., 210, 2023
6VL1
DownloadVisualize
BU of 6vl1 by Molmil
Crystal Structure of the N-prenyltransferase DabA in Complex with NGG and Mg2+
分子名称: DabA, MAGNESIUM ION, N-[(2E)-3,7-dimethylocta-2,6-dien-1-yl]-L-glutamic acid
著者Chekan, J.R, Noel, J.P, Moore, B.S.
登録日2020-01-22
公開日2020-04-08
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Algal neurotoxin biosynthesis repurposes the terpene cyclase structural fold into anN-prenyltransferase.
Proc.Natl.Acad.Sci.USA, 117, 2020
5EP5
DownloadVisualize
BU of 5ep5 by Molmil
The crystal structure of the hypothetical protein SAV0944 mutant (Glu47Ala) from Staphylococcus aureus.
分子名称: thioesterase
著者Khandokar, Y.B, Srivastava, P, Forwood, J.K.
登録日2015-11-11
公開日2015-11-25
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献The crystal structure of the hypothetical protein SAV0944 mutant (Glu47Ala) from Staphylococcus aureus
TO BE PUBLISHED
3R2H
DownloadVisualize
BU of 3r2h by Molmil
1.7 A resolution structure of As-Isolated FtnA from Pseudomonas aeruginosa (pH 10.5)
分子名称: 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, Bacterioferritin, SODIUM ION
著者Lovell, S.W, Battaile, K.P, Yao, H, Jepkorir, G, Nama, P.V, Weeratunga, S, Rivera, M.
登録日2011-03-14
公開日2011-05-25
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Two distinct ferritin-like molecules in Pseudomonas aeruginosa: the product of the bfrA gene is a bacterial ferritin (FtnA) and not a bacterioferritin (Bfr).
Biochemistry, 50, 2011
8U3G
DownloadVisualize
BU of 8u3g by Molmil
Structure of NAAG-bound Sialin
分子名称: ACETYL GROUP, ASPARTIC ACID, GLUTAMIC ACID, ...
著者Schmiege, P, Li, X.
登録日2023-09-07
公開日2024-05-29
実験手法ELECTRON MICROSCOPY (3.42 Å)
主引用文献Structure of NAAG-bound Sialin
To Be Published
3FRL
DownloadVisualize
BU of 3frl by Molmil
The 2.25 A crystal structure of LipL32, the major surface antigen of Leptospira interrogans serovar Copenhageni
分子名称: 2,2',2''-NITRILOTRIETHANOL, CHLORIDE ION, LipL32, ...
著者Farah, C.S, Guzzo, C.R, Hauk, P, Ho, P.L.
登録日2009-01-08
公開日2009-06-16
最終更新日2017-11-01
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structure and calcium-binding activity of LipL32, the major surface antigen of pathogenic Leptospira sp.
J.Mol.Biol., 390, 2009
5FYY
DownloadVisualize
BU of 5fyy by Molmil
Crystal structure of the catalytic domain of human JARID1B in complex with Maybridge fragment 3-pyridin-3-ylaniline (N05798a) (ligand modelled based on PANDDA event map)
分子名称: 1,2-ETHANEDIOL, 3-(pyridin-3-yl)aniline, CHLORIDE ION, ...
著者Nowak, R, Krojer, T, Johansson, C, Gileadi, C, Kupinska, K, Strain-Damerell, C, Szykowska, A, Pearce, N, Burgess-Brown, N.A, Arrowsmith, C.H, Bountra, C, Edwards, A.M, von Delft, F, Brennan, P.E, Oppermann, U.
登録日2016-03-10
公開日2016-03-23
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.18 Å)
主引用文献Crystal Structure of the Catalytic Domain of Human Jarid1B in Complex with N05798A
To be Published
4GW8
DownloadVisualize
BU of 4gw8 by Molmil
Human proto-oncogene serine threonine kinase (PIM1) in complex with a consensus peptide and Leucettine L41
分子名称: 1,2-ETHANEDIOL, 5-(1,3-benzodioxol-5-ylmethyl)-2-(phenylamino)-4H-imidazol-4-one, Consensus peptide (Pimtide), ...
著者Filippakopoulos, P, Bullock, A, von Delft, F, Bountra, C, Arrowsmith, C.H, Edwards, A, Meijer, L, Knapp, S, Structural Genomics Consortium (SGC)
登録日2012-09-01
公開日2012-10-03
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Selectivity, cocrystal structures, and neuroprotective properties of leucettines, a family of protein kinase inhibitors derived from the marine sponge alkaloid leucettamine B.
J.Med.Chem., 55, 2012
6MCX
DownloadVisualize
BU of 6mcx by Molmil
INFLUENZA VIRUS NEURAMINIDASE SUBTYPE N9 (TERN) RECOMBINANT HEAD DOMAIN
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, GLYCEROL, ...
著者Streltsov, V.A, Schmidt, P, McKimm-Breschkin, J.
登録日2018-09-02
公開日2019-01-23
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of an Influenza A virus N9 neuraminidase with a tetrabrachion-domain stalk.
Acta Crystallogr.,Sect.F, 75, 2019

224004

件を2024-08-21に公開中

PDB statisticsPDBj update infoContact PDBjnumon