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PDB: 46298 件

3KVH
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Crystal structure of human protein syndesmos (NUDT16-like protein)
分子名称: CHLORIDE ION, GLYCEROL, Protein syndesmos
著者Tresaugues, L, Siponen, M.I, Arrowsmith, C.H, Berglund, H, Bountra, C, Collins, R, Edwards, A.M, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Johansson, A, Johansson, I, Kallas, A, Karlberg, T, Kotenyova, T, Kotzsch, A, Kraulis, P, Moche, M, Nielsen, T.K, Nyman, T, Persson, C, Roos, A.K, Schuler, H, Schutz, P, Thorsell, A.G, Van Den Berg, S, Weigelt, J, Welin, M, Wisniewska, M, Nordlund, P, Structural Genomics Consortium (SGC)
登録日2009-11-30
公開日2010-01-19
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of human protein syndesmos (NUDT16L1)
To be Published
3L26
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Crystal structure of Zaire Ebola VP35 interferon inhibitory domain bound to 8 bp dsRNA
分子名称: CHLORIDE ION, MAGNESIUM ION, Polymerase cofactor VP35, ...
著者Leung, D.W, Prins, K.C, Borek, D.M, Farahbakhsh, M, Tufariello, J.M, Ramanan, P, Nix, J.C, Helgeson, L.A, Otwinowski, Z, Honzatko, R.B, Basler, C.F, Amarasinghe, G.K.
登録日2009-12-14
公開日2010-01-26
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural basis for dsRNA recognition and interferon antagonism by Ebola VP35.
Nat.Struct.Mol.Biol., 17, 2010
7NRP
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The crystal structure of a DNA:RNA hybrid duplex sequence CTTTTCTTTG
分子名称: CACODYLATE ION, DNA (5'-D(*CP*TP*TP*TP*TP*CP*TP*TP*TP*G)-3'), RNA (5'-R(*CP*AP*AP*AP*GP*AP*AP*AP*AP*G)-3')
著者Thorpe, C, Hardwick, J, McDonough, M.A, Hall, J.P, Baker, Y.R, El-Sagheer, A.H, Brown, T.
登録日2021-03-04
公開日2022-06-22
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.67 Å)
主引用文献An LNA-amide modification that enhances the cell uptake and activity of phosphorothioate exon-skipping oligonucleotides.
Nat Commun, 13, 2022
6OJX
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PilT4 from Geobacter metallireducens bound to ATP
分子名称: 1,2-ETHANEDIOL, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者McCallum, M, Howell, P.L.
登録日2019-04-12
公開日2019-11-20
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.892 Å)
主引用文献Multiple conformations facilitate PilT function in the type IV pilus.
Nat Commun, 10, 2019
6OKV
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PilT4 from Geobacter metallireducens bound to AMP-PNP: C2ccocco conformation
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
著者McCallum, M, Howell, P.L.
登録日2019-04-15
公開日2019-11-20
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (4.007 Å)
主引用文献Multiple conformations facilitate PilT function in the type IV pilus.
Nat Commun, 10, 2019
6OPH
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phosphorylated ERK2 with GDC-0994
分子名称: 1-[(1~{S})-1-(4-chloranyl-3-fluoranyl-phenyl)-2-oxidanyl-ethyl]-4-[2-[(2-methylpyrazol-3-yl)amino]pyrimidin-4-yl]pyridin-2-one, Mitogen-activated protein kinase 1
著者Vigers, G.P, Smith, D.
登録日2019-04-25
公開日2019-07-31
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Activation loop dynamics are controlled by conformation-selective inhibitors of ERK2.
Proc.Natl.Acad.Sci.USA, 116, 2019
1LUX
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BU of 1lux by Molmil
NMR SOLUTION STRUCTURE OF THE ANTICODON OF YEAST TRNA-PHE WITH 3 MODIFICATIONS (OMC32 OMG34 M5C40)
分子名称: 5'-R(*CP*CP*AP*GP*AP*(OMC)P*UP*(OMG)P*AP*AP*GP*AP*UP*(5MC)P*UP*GP*G)-3'
著者Stuart, J.W, Koshlap, K.M, Guenther, R.H, Agris, P.F.
登録日2002-05-23
公開日2003-09-09
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Naturally-occurring Modification Restricts the Anticodon Domain Conformational Space of tRNA(Phe).
J.Mol.Biol., 334, 2003
8DFA
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type I-C Cascade bound to ssDNA target
分子名称: CRISPR-associated protein, CT1133 family, TM1801 family, ...
著者O'Brien, R.E, Bravo, J.P.K, Ramos, D, Hibshman, G.N, Wright, J.T, Taylor, D.W.
登録日2022-06-21
公開日2023-02-22
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Structural snapshots of R-loop formation by a type I-C CRISPR Cascade.
Mol.Cell, 83, 2023
8IRV
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BU of 8irv by Molmil
Dopamine Receptor D5R-Gs-Rotigotine complex
分子名称: CHOLESTEROL, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
著者Xu, P, Huang, S, Zhuang, Y, Mao, C, Zhang, Y, Wang, Y, Li, H, Jiang, Y, Zhang, Y, Xu, H.E.
登録日2023-03-19
公開日2023-06-07
最終更新日2023-11-08
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structural genomics of the human dopamine receptor system.
Cell Res., 33, 2023
8D3Z
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Crystal structure of GalS1 in complex with Manganese from Populus trichocarpas
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Galactan synthase, ...
著者Pereira, J.H, Prabhakar, P.K, Urbanowicz, B.R, Adams, P.D.
登録日2022-06-01
公開日2023-03-15
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.56 Å)
主引用文献Structural and biochemical insight into a modular beta-1,4-galactan synthase in plants.
Nat.Plants, 9, 2023
1MGR
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BU of 1mgr by Molmil
Crystal structure of RNase Sa3,cytotoxic microbial ribonuclease
分子名称: Guanyl-specific ribonuclease Sa3, SULFATE ION
著者Sevcik, J, Urbanikova, L, Leland, P.A, Raines, R.T.
登録日2002-08-16
公開日2003-02-04
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Links X-ray Structure of Two Crystalline Forms of a Streptomycete Ribonuclease with Cytotoxic Activity
J.Biol.Chem., 277, 2002
7OHM
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A self-complementary DNA dodecamer duplex contaning 5-hydroxymethylcitosine
分子名称: DNA (5'-D(*CP*GP*AP*(DH)P*GP*TP*CP*G)-3')
著者Battistini, F, Dans, P.D, Terrazas, M, Castellazzi, C.L, Portella, G, Labrador, M, Villegas, N, Brun-Heath, I, Gonzalez, C, Orozco, M.
登録日2021-05-11
公開日2021-11-03
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献The Impact of the HydroxyMethylCytosine epigenetic signature on DNA structure and function.
Plos Comput.Biol., 17, 2021
1MGW
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BU of 1mgw by Molmil
Crystal structure of RNase Sa3, cytotoxic microbial ribonuclease
分子名称: Guanyl-specific ribonuclease Sa3, LITHIUM ION
著者Sevcik, J, Urbanikova, L, Leland, P.A, Raines, R.T.
登録日2002-08-16
公開日2003-02-04
最終更新日2011-11-16
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Links X-ray Structure of Two Crystalline Forms of a Streptomycete Ribonuclease with Cytotoxic Activity
J.Biol.Chem., 277, 2002
6OOL
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BU of 6ool by Molmil
Structural elucidation of the Ectodomain of mouse UNC5H2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, Netrin receptor UNC5B, ...
著者Stetefeld, J, McDougall, M.D, Loewen, P.C, Moya, A, Meier, M.
登録日2019-04-23
公開日2020-04-29
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural elucidation of the Ectodomain of mouse UNC5H2
To be published
2F73
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Crystal structure of human fatty acid binding protein 1 (FABP1)
分子名称: Fatty acid-binding protein, liver
著者Kursula, P, Thorsell, A.G, Arrowsmith, C, Berglund, H, Edwards, A, Ehn, M, Flodin, S, Graslund, S, Hammarstrom, M, Holmberg Schiavone, L, Kotenyova, T, Nilsson-Ehle, P, Nordlund, P, Nyman, T, Ogg, D, Persson, C, Sagemark, J, Stenmark, P, Sundstrom, M, van den Berg, S, Weigelt, J, Hallberg, B.M, Structural Genomics Consortium (SGC)
登録日2005-11-30
公開日2005-12-13
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of human FABP1
To be Published
1MFZ
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Partially refined 2.8 A Crystal structure of GDP-mannose dehydrogenase from P. aeruginosa
分子名称: GDP-mannose 6-dehydrogenase, GUANOSINE 5'-(TRIHYDROGEN DIPHOSPHATE), P'-D-MANNOPYRANOSYL ESTER
著者Snook, C.F, Tipton, P.A, Beamer, L.J.
登録日2002-08-14
公開日2003-05-06
最終更新日2014-11-12
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献The crystal structure of GDP-mannose dehydrogenase: A key enzyme in alginate biosynthesis of P. aeruginosa
Biochemistry, 42, 2003
1M5O
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Transition State Stabilization by a Catalytic RNA
分子名称: CALCIUM ION, RNA SUBSTRATE, RNA HAIRPIN RIBOZYME, ...
著者Rupert, P.B, Massey, A.P, Sigurdsson, S.T, Ferre-D'Amare, A.R.
登録日2002-07-09
公開日2002-10-12
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Transition state stabilization by a catalytic RNA
Science, 298, 2002
5WDQ
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BU of 5wdq by Molmil
H-Ras mutant L120A bound to GMP-PNP at 100K
分子名称: ACETATE ION, CALCIUM ION, GTPase HRas, ...
著者Bandaru, P, Gee, C.L, Kuriyan, J.
登録日2017-07-05
公開日2017-07-19
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Deconstruction of the Ras switching cycle through saturation mutagenesis.
Elife, 6, 2017
5WHY
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BU of 5why by Molmil
Structural Insights into Thioether Bond Formation in the Biosynthesis of Sactipeptides
分子名称: CALCIUM ION, IRON/SULFUR CLUSTER, Radical SAM domain protein, ...
著者Grove, T.L, Himes, P, Bowers, A, Bonanno, J.B, Almo, S.C.
登録日2017-07-18
公開日2017-07-26
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.692 Å)
主引用文献Structural Insights into Thioether Bond Formation in the Biosynthesis of Sactipeptides.
J. Am. Chem. Soc., 139, 2017
6DHH
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RT XFEL structure of Photosystem II 400 microseconds after the second illumination at 2.2 Angstrom resolution
分子名称: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
著者Kern, J, Chatterjee, R, Young, I.D, Fuller, F.D, Lassalle, L, Ibrahim, M, Gul, S, Fransson, T, Brewster, A.S, Alonso-Mori, R, Hussein, R, Zhang, M, Douthit, L, de Lichtenberg, C, Cheah, M.H, Shevela, D, Wersig, J, Seufert, I, Sokaras, D, Pastor, E, Weninger, C, Kroll, T, Sierra, R.G, Aller, P, Butryn, A, Orville, A.M, Liang, M, Batyuk, A, Koglin, J.E, Carbajo, S, Boutet, S, Moriarty, N.W, Holton, J.M, Dobbek, H, Adams, P.D, Bergmann, U, Sauter, N.K, Zouni, A, Messinger, J, Yano, J, Yachandra, V.K.
登録日2018-05-20
公開日2018-11-21
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structures of the intermediates of Kok's photosynthetic water oxidation clock.
Nature, 563, 2018
6OPG
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phosphorylated ERK2 with AMP-PNP
分子名称: MAGNESIUM ION, Mitogen-activated protein kinase 1, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
著者Vigers, G.P, Smith, D.
登録日2019-04-25
公開日2019-07-31
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Activation loop dynamics are controlled by conformation-selective inhibitors of ERK2.
Proc.Natl.Acad.Sci.USA, 116, 2019
5WKA
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Crystal structure of a GH1 beta-glucosidase retrieved from microbial metagenome of Poraque Amazon lake
分子名称: Beta-glucosidase, DI(HYDROXYETHYL)ETHER, GLYCEROL
著者Morais, M.A.B, Toyama, D, Ramos, F.C, Zanphorlin, L.M, Tonoli, C.C.C, Miranda, F.P, Ruller, R, Henrique-Silva, F, Murakami, M.T.
登録日2017-07-24
公開日2018-03-07
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献A novel beta-glucosidase isolated from the microbial metagenome of Lake Poraque (Amazon, Brazil).
Biochim. Biophys. Acta, 1866, 2018
2F19
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THREE-DIMENSIONAL STRUCTURE OF TWO CRYSTAL FORMS OF FAB R19.9, FROM A MONOCLONAL ANTI-ARSONATE ANTIBODY
分子名称: IGG2B-KAPPA R19.9 FAB (HEAVY CHAIN), IGG2B-KAPPA R19.9 FAB (LIGHT CHAIN)
著者Lascombe, M.B, Alzari, P.M, Poljak, R.J, Nisonoff, A.
登録日1992-05-27
公開日1992-10-15
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Three-dimensional structure of two crystal forms of FabR19.9 from a monoclonal anti-arsonate antibody.
Proc.Natl.Acad.Sci.USA, 89, 1992
5W8Q
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Crystal structure of biphenyl synthase from Malus domestica
分子名称: (3R)-butane-1,3-diol, BIS3 biphenyl synthase
著者Stewart Jr, C.E, Noel, J.P.
登録日2017-06-22
公開日2017-12-13
実験手法X-RAY DIFFRACTION (1.173 Å)
主引用文献Molecular architectures of benzoic acid-specific type III polyketide synthases.
Acta Crystallogr D Struct Biol, 73, 2017
6OJZ
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PilT4 from Geobacter metallireducens bound to ADP with partial occupancy: C3ocococ conformation
分子名称: ADENOSINE-5'-DIPHOSPHATE, Twitching motility pilus retraction ATPase
著者McCallum, M, Howell, P.L.
登録日2019-04-12
公開日2019-11-20
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.027 Å)
主引用文献Multiple conformations facilitate PilT function in the type IV pilus.
Nat Commun, 10, 2019

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