Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 45955 results

2VJA
DownloadVisualize
BU of 2vja by Molmil
Torpedo Californica Acetylcholinesterase In Complex With A Non Hydrolysable Substrate Analogue, 4-Oxo-N,N,N- Trimethylpentanaminium - Orthorhombic space group - Dataset A at 100K
Descriptor: (4R)-4-HYDROXY-N,N,N-TRIMETHYLPENTAN-1-AMINIUM, 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETYLCHOLINESTERASE, ...
Authors:Colletier, J.P, Bourgeois, D, Fournier, D, Silman, I, Sussman, J.L, Weik, M.
Deposit date:2007-12-09
Release date:2008-07-22
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Shoot-and-Trap: Use of Specific X-Ray Damage to Study Structural Protein Dynamics by Temperature-Controlled Cryo-Crystallography.
Proc.Natl.Acad.Sci.USA, 105, 2008
1PGC
DownloadVisualize
BU of 1pgc by Molmil
NMR Solution Structure of an Oxaliplatin 1,2-d(GG) Intrastrand Cross-Link in a DNA Dodecamer Duplex
Descriptor: 5'-D(*CP*CP*TP*CP*AP*GP*GP*CP*CP*TP*CP*C)-3', 5'-D(*GP*GP*AP*GP*GP*CP*CP*TP*GP*AP*GP*G)-3', CYCLOHEXANE-1(R),2(R)-DIAMINE-PLATINUM(II)
Authors:Wu, Y, Pradhan, P, Havener, J, Chaney, S.G, Campbel, S.L.
Deposit date:2003-05-28
Release date:2004-07-06
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:NMR solution structure of an oxaliplatin 1,2-d(GG) intrastrand cross-link in a DNA dodecamer duplex
J.Mol.Biol., 341, 2004
4CDK
DownloadVisualize
BU of 4cdk by Molmil
Structure of ZNRF3-RSPO1
Descriptor: E3 UBIQUITIN-PROTEIN LIGASE ZNRF3, R-SPONDIN-1
Authors:Peng, W.C, de Lau, W, Madoori, P.K, Forneris, F, Granneman, J.C.M, Clevers, H, Gros, P.
Deposit date:2013-11-01
Release date:2014-01-08
Last modified:2019-04-03
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structures of Wnt-Antagonist Znrf3 and its Complex with R-Spondin 1 and Implications for Signaling.
Plos One, 8, 2013
2NQ8
DownloadVisualize
BU of 2nq8 by Molmil
Malarial enoyl acyl ACP reductase bound with INH-NAD adduct
Descriptor: Enoyl-acyl carrier reductase, ISONICOTINIC-ACETYL-NICOTINAMIDE-ADENINE DINUCLEOTIDE
Authors:Freundlich, J.S, Yu, M, Lucumi, E, Kuo, M, Tsai, H.C, Valderramos, J.C, Karagyozov, L, Jacobs Jr, W.R, Schiehser, G.A, Fidock, D.A, Jacobus, D.P, Sacchettini, J.C.
Deposit date:2006-10-30
Release date:2007-07-17
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:X-ray structural analysis of Plasmodium falciparum enoyl acyl carrier protein reductase as a pathway toward the optimization of triclosan antimalarial efficacy
J.Biol.Chem., 282, 2007
7FDV
DownloadVisualize
BU of 7fdv by Molmil
Cryo-EM structure of the human cholesterol transporter ABCG1 in complex with cholesterol
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, ATP-binding cassette sub-family G member 1, CHOLESTEROL, ...
Authors:Xu, D, Li, Y.Y, Yang, F.R, Sun, C.R, Pan, J.H, Wang, L, Chen, Z.P, Fang, S.C, Yao, X.B, Hou, W.T, Zhou, C.Z, Chen, Y.
Deposit date:2021-07-18
Release date:2022-06-22
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.26 Å)
Cite:Structure and transport mechanism of the human cholesterol transporter ABCG1.
Cell Rep, 38, 2022
4BW4
DownloadVisualize
BU of 4bw4 by Molmil
The first bromodomain of human BRD4 in complex with 3,5 dimethylisoxaxole ligand
Descriptor: 7-(3,5-dimethylisoxazol-4-yl)-8-methoxy-1-(2-(trifluoromethoxy)phenyl)-1h-imidazo[4,5-c][1,5]naphthyridin-2(3h)-one, BROMODOMAIN-CONTAINING PROTEIN 4
Authors:Chung, C, Mirguet, O, Lamotte, Y, Bamborough, P, Delannee, D, Bouillot, A, Gellibert, F, Krysa, G, Lewis, A, Witherington, J, Huet, P, Dudit, Y, Trottet, L, Nicodeme, E.
Deposit date:2013-06-29
Release date:2013-09-11
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Naphthyridines as Novel Bet Family Bromodomain Inhibitors.
Chemmedchem, 9, 2014
1C3H
DownloadVisualize
BU of 1c3h by Molmil
ACRP30 CALCIUM COMPLEX
Descriptor: 30 KD ADIPOCYTE COMPLEMENT-RELATED PROTEIN PRECURSOR, CALCIUM ION
Authors:Shapiro, L, Boggon, T, Scherer, P.
Deposit date:1999-07-27
Release date:2003-12-09
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:ACRP30 calcium complex
To Be Published
6XS4
DownloadVisualize
BU of 6xs4 by Molmil
Crystal structure of glycyl radical enzyme ECL_02896 from Enterobacter cloacae subsp. cloacae
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Formate C-acetyltransferase
Authors:Valleau, D, Evdokimova, E, Stogios, P.J, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2020-07-14
Release date:2020-08-12
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Crystal structure of glycyl radical enzyme ECL_02896 from Enterobacter cloacae subsp. cloacae.
To Be Published
5LC8
DownloadVisualize
BU of 5lc8 by Molmil
Crystal Structure of specific mutant from Pseudomonas aeruginosa Lipoxygenase at 1.8A resolution
Descriptor: (2R)-3-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-2-(tetradec-5-enoyloxy)propyl (11Z)-octadec-11-enoate, Arachidonate 15-lipoxygenase, DI(HYDROXYETHYL)ETHER, ...
Authors:Kalms, J, Banthiya, S, Galemou Yoga, E, Kuhn, H, Scheerer, P.
Deposit date:2016-06-20
Release date:2017-01-25
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The crystal structure of Pseudomonas aeruginosa lipoxygenase Ala420Gly mutant explains the improved oxygen affinity and the altered reaction specificity.
Biochim. Biophys. Acta, 1862, 2017
1BN6
DownloadVisualize
BU of 1bn6 by Molmil
HALOALKANE DEHALOGENASE FROM A RHODOCOCCUS SPECIES
Descriptor: HALOALKANE DEHALOGENASE
Authors:Newman, J, Peat, T.S, Richard, R, Kan, L, Swanson, P.E, Affholter, J.A, Holmes, I.H, Schindler, J.F, Unkefer, C.J, Terwilliger, T.C.
Deposit date:1998-07-31
Release date:2000-02-18
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Haloalkane dehalogenases: structure of a Rhodococcus enzyme.
Biochemistry, 38, 1999
1BN7
DownloadVisualize
BU of 1bn7 by Molmil
HALOALKANE DEHALOGENASE FROM A RHODOCOCCUS SPECIES
Descriptor: ACETATE ION, HALOALKANE DEHALOGENASE
Authors:Newman, J, Peat, T.S, Richard, R, Kan, L, Swanson, P.E, Affholter, J.A, Holmes, I.H, Schindler, J.F, Unkefer, C.J, Terwilliger, T.C.
Deposit date:1998-07-31
Release date:2000-02-18
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Haloalkane dehalogenases: structure of a Rhodococcus enzyme.
Biochemistry, 38, 1999
1JV6
DownloadVisualize
BU of 1jv6 by Molmil
BACTERIORHODOPSIN D85S/F219L DOUBLE MUTANT AT 2.00 ANGSTROM RESOLUTION
Descriptor: 1-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROL, Bacteriorhodopsin, RETINAL
Authors:Rouhani, S, Cartailler, J.-P, Facciotti, M.T, Walian, P, Needleman, R, Lanyi, J.K, Glaeser, R.M, Luecke, H.
Deposit date:2001-08-28
Release date:2001-10-31
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the D85S mutant of bacteriorhodopsin: model of an O-like photocycle intermediate.
J.Mol.Biol., 313, 2001
8J4H
DownloadVisualize
BU of 8j4h by Molmil
X-ray structure of a ferric ion-binding protein A (FbpA) from Vibrio metschnikovii in complex with Danshensu (DSS)
Descriptor: (2~{R})-3-[3,4-bis(oxidanyl)phenyl]-2-oxidanyl-propanoic acid, Ferric iron ABC transporter iron-binding protein
Authors:Lu, P, Jiang, J, Nagata, K.
Deposit date:2023-04-20
Release date:2024-01-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Molecular mechanism of Fe 3+ binding inhibition to Vibrio metschnikovii ferric ion-binding protein, FbpA, by rosmarinic acid and its hydrolysate, danshensu.
Protein Sci., 33, 2024
4BR9
DownloadVisualize
BU of 4br9 by Molmil
Legionella pneumophila NTPDase1 crystal form II, closed, apo
Descriptor: ECTONUCLEOSIDE TRIPHOSPHATE DIPHOSPHOHYDROLASE I, GLYCEROL, SULFATE ION
Authors:Zebisch, M, Schaefer, P, Lauble, P, Straeter, N.
Deposit date:2013-06-04
Release date:2013-07-17
Last modified:2017-08-23
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystallographic Snapshots Along the Reaction Pathway of Nucleoside Triphosphate Diphosphohydrolases
Structure, 21, 2013
8J4J
DownloadVisualize
BU of 8j4j by Molmil
X-ray structure of a ferric ion-binding protein A (FbpA) from Vibrio metschnikovii in complex with ferric ion
Descriptor: CARBONATE ION, FE (III) ION, Ferric iron ABC transporter iron-binding protein
Authors:Lu, P, Jiang, J, Nagata, K.
Deposit date:2023-04-20
Release date:2024-01-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Molecular mechanism of Fe 3+ binding inhibition to Vibrio metschnikovii ferric ion-binding protein, FbpA, by rosmarinic acid and its hydrolysate, danshensu.
Protein Sci., 33, 2024
4BRP
DownloadVisualize
BU of 4brp by Molmil
Legionella pneumophila NTPDase1 crystal form V (part-open)
Descriptor: BROMIDE ION, ECTONUCLEOSIDE TRIPHOSPHATE DIPHOSPHOHYDROLASE I
Authors:Zebisch, M, Schaefer, P, Lauble, P, Straeter, N.
Deposit date:2013-06-04
Release date:2013-07-17
Last modified:2013-12-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystallographic Snapshots Along the Reaction Pathway of Nucleoside Triphosphate Diphosphohydrolases
Structure, 21, 2013
5LJN
DownloadVisualize
BU of 5ljn by Molmil
Structure of the HOIP PUB domain bound to SPATA2 PIM peptide
Descriptor: E3 ubiquitin-protein ligase RNF31, GLYCEROL, SULFATE ION, ...
Authors:Elliott, P.R, Komander, D.
Deposit date:2016-07-18
Release date:2016-08-24
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.701 Å)
Cite:SPATA2 Links CYLD to LUBAC, Activates CYLD, and Controls LUBAC Signaling.
Mol.Cell, 63, 2016
1K03
DownloadVisualize
BU of 1k03 by Molmil
Crystal Structure of Old Yellow Enzyme Mutant Gln114Asn Complexed with Para-hydroxy Benzaldehyde
Descriptor: FLAVIN MONONUCLEOTIDE, MAGNESIUM ION, NADPH DEHYDROGENASE 1, ...
Authors:Brown, B.J, Hyun, J, Duvvuri, S.D, Karplus, P.A, Massey, V.
Deposit date:2001-09-18
Release date:2001-09-26
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The role of glutamine 114 in old yellow enzyme
J.Biol.Chem., 277, 2002
5WCD
DownloadVisualize
BU of 5wcd by Molmil
Crystal structure of the broadly neutralizing Influenza A antibody VRC 315 04-1D02 Fab.
Descriptor: PHOSPHATE ION, SULFATE ION, VRC315 04-1D02 Fab Heavy chain, ...
Authors:Joyce, M.G, Andrews, S.F, Mascola, J.R, McDermott, A.B, Kwong, P.D.
Deposit date:2017-06-29
Release date:2017-08-23
Last modified:2018-11-28
Method:X-RAY DIFFRACTION (1.814 Å)
Cite:Preferential induction of cross-group influenza A hemagglutinin stem-specific memory B cells after H7N9 immunization in humans.
Sci Immunol, 2, 2017
1BS0
DownloadVisualize
BU of 1bs0 by Molmil
PLP-DEPENDENT ACYL-COA SYNTHASE
Descriptor: PROTEIN (8-AMINO-7-OXONANOATE SYNTHASE), SULFATE ION
Authors:Alexeev, D, Alexeeva, M, Baxter, R.L, Campopiano, D.J, Webster, S.P, Sawyer, L.
Deposit date:1998-08-31
Release date:1999-08-27
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:The crystal structure of 8-amino-7-oxononanoate synthase: a bacterial PLP-dependent, acyl-CoA-condensing enzyme.
J.Mol.Biol., 284, 1998
2VO5
DownloadVisualize
BU of 2vo5 by Molmil
Structural and biochemical evidence for a boat-like transition state in beta-mannosidases
Descriptor: (1R,4R,5R,7R,8R)-2-Benzyl-5-hydroxymethyl-2-aza-bicyclo[2.2.2]octane-4,7,8-triol, 1,2-ETHANEDIOL, BETA-MANNOSIDASE, ...
Authors:Tailford, L.E, Offen, W.A, Smith, N.L, Dumon, C, Moreland, C, Gratien, J, Heck, M.P, Stick, R.V, Bleriot, Y, Vasella, A, Gilbert, H.J, Davies, G.J.
Deposit date:2008-02-08
Release date:2008-04-01
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural and Biochemical Evidence for a Boat-Like Transition State in Beta-Mannosidases.
Nat.Chem.Biol., 4, 2008
3NK7
DownloadVisualize
BU of 3nk7 by Molmil
Structure of the Nosiheptide-resistance methyltransferase S-adenosyl-L-methionine Complex
Descriptor: 23S rRNA methyltransferase, S-ADENOSYLMETHIONINE
Authors:Yang, H, Wang, Z, Shen, Y, Wang, P, Murchie, A, Xu, Y.
Deposit date:2010-06-18
Release date:2010-07-21
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure of the Nosiheptide-Resistance Methyltransferase of Streptomyces actuosus
Biochemistry, 49, 2010
1J9B
DownloadVisualize
BU of 1j9b by Molmil
ARSENATE REDUCTASE+0.4M ARSENITE FROM E. COLI
Descriptor: ARSENATE REDUCTASE, CESIUM ION, SULFATE ION, ...
Authors:Martin, P, Edwards, B.F.
Deposit date:2001-05-24
Release date:2001-12-05
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.26 Å)
Cite:Insights into the structure, solvation, and mechanism of ArsC arsenate reductase, a novel arsenic detoxification enzyme.
Structure, 9, 2001
7U4B
DownloadVisualize
BU of 7u4b by Molmil
Ampicillin-CTX-M-15
Descriptor: (2S,4S)-2-[(1S)-1-{[(2S)-2-amino-2-phenylacetyl]amino}-2-oxoethyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid, Beta-lactamase, SULFATE ION
Authors:Ahmadvand, P, Kang, C.H.
Deposit date:2022-02-28
Release date:2022-05-25
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Characterization of Interactions between CTX-M-15 and Clavulanic Acid, Desfuroylceftiofur, Ceftiofur, Ampicillin, and Nitrocefin.
Int J Mol Sci, 23, 2022
1C16
DownloadVisualize
BU of 1c16 by Molmil
CRYSTAL STRUCTURE ANALYSIS OF THE GAMMA/DELTA T CELL LIGAND T22
Descriptor: MHC-LIKE PROTEIN T22, PROTEIN (BETA-2-MICROGLOBULIN)
Authors:Wingren, C, Crowley, M.P, Degano, M, Chien, Y, Wilson, I.A.
Deposit date:1999-07-20
Release date:2000-01-26
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Crystal structure of a gammadelta T cell receptor ligand T22: a truncated MHC-like fold.
Science, 287, 2000

224004

PDB entries from 2024-08-21

PDB statisticsPDBj update infoContact PDBjnumon