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PDB: 61 件

8DF8
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Structure of M. kandleri topoisomerase V in complex with DNA. 40 base pair symmetric DNA complex
分子名称: DNA (42-MER), PHOSPHATE ION, PHOSPHITE ION, ...
著者Osterman, A, Mondragon, A.
登録日2022-06-21
公開日2022-08-31
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.92 Å)
主引用文献Structures of topoisomerase V in complex with DNA reveal unusual DNA binding mode and novel relaxation mechanism.
Elife, 11, 2022
8DF9
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Structure of M. kandleri topoisomerase V in complex with DNA. 38 base pair asymmetric DNA complex
分子名称: DNA (33-MER), DNA (5'-D(P*GP*CP*CP*TP*GP*CP*AP*CP*GP*AP*AP*GP*TP*AP*AP*GP*C)-3'), DNA (5'-D(P*GP*CP*CP*TP*GP*CP*AP*CP*GP*AP*AP*GP*TP*AP*AP*GP*CP*A)-3'), ...
著者Osterman, A, Mondragon, A.
登録日2022-06-21
公開日2022-08-31
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (3.24 Å)
主引用文献Structures of topoisomerase V in complex with DNA reveal unusual DNA binding mode and novel relaxation mechanism.
Elife, 11, 2022
8DFB
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Structure of M. kandleri topoisomerase V in complex with DNA. 39 base pair symmetric DNA complex
分子名称: DNA (40-MER), POTASSIUM ION, Topoisomerase V
著者Osterman, A, Mondragon, A.
登録日2022-06-21
公開日2022-08-31
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3.17 Å)
主引用文献Structures of topoisomerase V in complex with DNA reveal unusual DNA binding mode and novel relaxation mechanism.
Elife, 11, 2022
8DF7
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BU of 8df7 by Molmil
Structure of M. kandleri topoisomerase V in complex with DNA. 38 base pair symmetric DNA complex
分子名称: DNA (39-MER), POTASSIUM ION, Topoisomerase V
著者Osterman, A, Mondragon, A.
登録日2022-06-21
公開日2022-08-31
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (3.52 Å)
主引用文献Structures of topoisomerase V in complex with DNA reveal unusual DNA binding mode and novel relaxation mechanism.
Elife, 11, 2022
1L2K
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Neutron Structure Determination of Sperm Whale Met-Myoglobin at 1.5A Resolution.
分子名称: AMMONIUM CATION WITH D, MYOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Ostermann, A, Tanaka, I, Engler, N, Niimura, N, Parak, F.G.
登録日2002-02-21
公開日2002-08-21
最終更新日2024-04-03
実験手法NEUTRON DIFFRACTION (1.5 Å)
主引用文献Hydrogen and deuterium in myoglobin as seen by a neutron structure determination at 1.5 A resolution.
Biophys.Chem., 95, 2002
1DO4
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CARBONMONOXY-MYOGLOBIN (MUTANT L29W) AFTER PHOTOLYSIS AT T<180K
分子名称: CARBON MONOXIDE, MYOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Ostermann, A, Waschipky, R, Parak, F.G, Nienhaus, G.U.
登録日1999-12-18
公開日2000-01-05
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Ligand binding and conformational motions in myoglobin.
Nature, 404, 2000
1DO7
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CARBONMONOXY-MYOGLOBIN (MUTANT L29W) REBINDING STRUCTURE AFTER PHOTOLYSIS AT T< 180K
分子名称: CARBON MONOXIDE, MYOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Ostermann, A, Waschipky, R, Parak, F.G, Nienhaus, G.U.
登録日1999-12-19
公開日2000-01-05
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Ligand binding and conformational motions in myoglobin.
Nature, 404, 2000
1DO1
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CARBONMONOXY-MYOGLOBIN MUTANT L29W AT 105K
分子名称: CARBON MONOXIDE, MYOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Ostermann, A, Waschipky, R, Parak, F.G, Nienhaus, G.U.
登録日1999-12-18
公開日2000-01-05
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Ligand binding and conformational motions in myoglobin.
Nature, 404, 2000
1DO3
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CARBONMONOXY-MYOGLOBIN (MUTANT L29W) AFTER PHOTOLYSIS AT T>180K
分子名称: CARBON MONOXIDE, MYOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Ostermann, A, Waschipky, R, Parak, F.G, Nienhaus, G.U.
登録日1999-12-18
公開日2000-01-05
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Ligand binding and conformational motions in myoglobin.
Nature, 404, 2000
1YB0
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Structure of PlyL
分子名称: PHOSPHATE ION, ZINC ION, prophage LambdaBa02, ...
著者Low, L.Y, Yang, C, Perego, M, Osterman, A, Liddington, R.C.
登録日2004-12-18
公開日2005-08-23
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Structure and lytic activity of a Bacillus anthracis prophage endolysin
J.Biol.Chem., 280, 2005
5HM5
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Crystal structure of Topo-97, an N-terminal 97kDa fragment of topoisomerase V
分子名称: Topoisomerase V
著者Rajan, R, Osterman, A, Mondragon, A.
登録日2016-01-15
公開日2016-03-09
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Methanopyrus kandleri topoisomerase V contains three distinct AP lyase active sites in addition to the topoisomerase active site.
Nucleic Acids Res., 44, 2016
3Q1Q
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Structure of a Bacterial Ribonuclease P Holoenzyme in Complex with tRNA
分子名称: MAGNESIUM ION, PHOSPHATE ION, RNase P RNA, ...
著者Reiter, N.J, Osterman, A, Torres-Larios, A, Swinger, K.K, Pan, T, Mondragon, A.
登録日2010-12-17
公開日2011-03-09
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.8 Å)
主引用文献Structure of a Bacterial Ribonuclease P Holoenzyme in Complex with tRNA.
Nature, 468, 2010
2AR3
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E90A mutant structure of PlyL
分子名称: PHOSPHATE ION, ZINC ION, prophage lambdaba02, ...
著者Low, L.Y, Yang, C, Perego, M, Osterman, A, Liddington, R.C.
登録日2005-08-19
公開日2006-06-06
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure and lytic activity of a Bacillus anthracis prophage endolysin.
J.Biol.Chem., 280, 2005
4RPI
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Crystal Structure of Nicotinate Mononucleotide Adenylyltransferase from Mycobacterium tuberculosis
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, DIMETHYL SULFOXIDE, nicotinate-nucleotide adenylyltransferase
著者Rodionova, I, Zuccola, H, Sorci, L, Aleshin, A.E, Kazanov, M, Sergienko, E, Rubin, E, Locher, C, Osterman, A.
登録日2014-10-30
公開日2015-01-28
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.417 Å)
主引用文献Mycobacterial nicotinate mononucleotide adenylyltransferase: structure, mechanism, and implications for drug discovery.
J. Biol. Chem., 290, 2015
2QJT
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Crystal structure of a bifunctional NMN adenylyltransferase/ADP ribose pyrophosphatase complexed with AMP and MN ion from Francisella tularensis
分子名称: ADENOSINE MONOPHOSPHATE, MANGANESE (II) ION, Nicotinamide-nucleotide adenylyltransferase
著者Huang, N, Sorci, L, Zhang, X, Brautigan, C, Raffaelli, N, Magni, G, Grishin, N.V, Osterman, A, Zhang, H.
登録日2007-07-09
公開日2008-03-04
最終更新日2017-10-18
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Bifunctional NMN Adenylyltransferase/ADP-Ribose Pyrophosphatase: Structure and Function in Bacterial NAD Metabolism.
Structure, 16, 2008
2QJO
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crystal structure of a bifunctional NMN adenylyltransferase/ADP ribose pyrophosphatase (NadM) complexed with ADPRP and NAD from Synechocystis sp.
分子名称: ADENOSINE-5-DIPHOSPHORIBOSE, Bifunctional NMN adenylyltransferase/Nudix hydrolase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
著者Huang, N, Sorci, L, Zhang, X, Brautigan, C, Raffaelli, N, Magni, G, Grishin, N.V, Osterman, A, Zhang, H.
登録日2007-07-08
公開日2008-03-11
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Bifunctional NMN Adenylyltransferase/ADP-Ribose Pyrophosphatase: Structure and Function in Bacterial NAD Metabolism.
Structure, 16, 2008
2R5W
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Crystal structure of a bifunctional NMN adenylyltransferase/ADP ribose pyrophosphatase from Francisella tularensis
分子名称: CHLORIDE ION, MAGNESIUM ION, Nicotinamide-nucleotide adenylyltransferase
著者Huang, N, Sorci, L, Zhang, X, Brautigan, C, Li, X, Raffaelli, N, Grishin, N, Osterman, A, Zhang, H.
登録日2007-09-04
公開日2008-03-04
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Bifunctional NMN Adenylyltransferase/ADP-Ribose Pyrophosphatase: Structure and Function in Bacterial NAD Metabolism.
Structure, 16, 2008
1K4M
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Crystal structure of E.coli nicotinic acid mononucleotide adenylyltransferase complexed to deamido-NAD
分子名称: CITRIC ACID, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, NaMN adenylyltransferase
著者Zhang, H, Zhou, T, Kurnasov, O, Cheek, S, Grishin, N.V, Osterman, A.
登録日2001-10-08
公開日2002-10-08
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structures of E. coli nicotinate mononucleotide adenylyltransferase and its complex with deamido-NAD.
Structure, 10, 2002
1OBR
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CARBOXYPEPTIDASE T
分子名称: CALCIUM ION, CARBOXYPEPTIDASE T, SULFATE ION, ...
著者Teplyakov, A, Polyakov, K, Obmolova, G, Osterman, A.
登録日1996-06-22
公開日1997-01-11
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of carboxypeptidase T from Thermoactinomyces vulgaris.
Eur.J.Biochem., 208, 1992
6L27
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X-ray crystal structure of the mutant green fluorescent protein
分子名称: Green fluorescent protein
著者Adachi, M, Shimizu, R, Shibazaki, C, Kagotani, Y, Ostermann, A, Schrader, T.E.
登録日2019-10-02
公開日2020-04-01
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (0.77 Å)
主引用文献Direct Observation of the Protonation States in the Mutant Green Fluorescent Protein.
J Phys Chem Lett, 11, 2020
6L26
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Neutron crystal structure of the mutant green fluorescent protein (EGFP)
分子名称: Green fluorescent protein, trideuteriooxidanium
著者Adachi, M, Shimizu, R, Shibazaki, C, Kagotani, Y, Ostermann, A, Schrader, T.E.
登録日2019-10-02
公開日2020-04-08
最終更新日2024-10-30
実験手法NEUTRON DIFFRACTION (1.444 Å)
主引用文献Direct Observation of the Protonation States in the Mutant Green Fluorescent Protein.
J Phys Chem Lett, 11, 2020
4XQD
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X-ray structure analysis of xylanase-WT at pH4.0
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Endo-1,4-beta-xylanase 2, IODIDE ION
著者Wan, Q, Park, J.M, Riccardi, D.M, Hanson, L.B, Fisher, Z, Smith, J.C, Ostermann, A, Schrader, T, Graham, D.E, Coates, L, Langan, P, Kovalevsky, A.Y.
登録日2015-01-19
公開日2015-09-23
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Direct determination of protonation states and visualization of hydrogen bonding in a glycoside hydrolase with neutron crystallography.
Proc.Natl.Acad.Sci.USA, 112, 2015
4XQW
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X-ray structure analysis of xylanase-N44E with MES at pH6.0
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Endo-1,4-beta-xylanase 2, IODIDE ION
著者Wan, Q, Park, J.M, Riccardi, D.M, Hanson, L.B, Fisher, Z, Smith, J.C, Ostermann, A, Schrader, T, Graham, D.E, Coates, L, Langan, P, Kovalevsky, A.Y.
登録日2015-01-20
公開日2015-09-23
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Direct determination of protonation states and visualization of hydrogen bonding in a glycoside hydrolase with neutron crystallography.
Proc.Natl.Acad.Sci.USA, 112, 2015
4XPV
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Neutron and X-ray structure analysis of xylanase: N44D at pH6
分子名称: Endo-1,4-beta-xylanase 2, IODIDE ION
著者Wan, Q, Park, J.M, Riccardi, D.M, Hanson, L.B, Fisher, Z, Smith, J.C, Ostermann, A, Schrader, T, Graham, D.E, Coates, L, Langan, P, Kovalevsky, A.Y.
登録日2015-01-18
公開日2015-09-30
最終更新日2023-09-27
実験手法NEUTRON DIFFRACTION (1.7 Å), X-RAY DIFFRACTION
主引用文献Direct determination of protonation states and visualization of hydrogen bonding in a glycoside hydrolase with neutron crystallography.
Proc.Natl.Acad.Sci.USA, 112, 2015
4XQ4
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X-ray structure analysis of xylanase - N44D
分子名称: Endo-1,4-beta-xylanase 2, IODIDE ION
著者Wan, Q, Park, J.M, Riccardi, D.M, Hanson, L.B, Fisher, Z, Smith, J.C, Ostermann, A, Schrader, T, Graham, D.E, Coates, L, Langan, P, Kovalevsky, A.Y.
登録日2015-01-19
公開日2015-09-23
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Direct determination of protonation states and visualization of hydrogen bonding in a glycoside hydrolase with neutron crystallography.
Proc.Natl.Acad.Sci.USA, 112, 2015

 

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