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PDB: 333 results

7SQE
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BU of 7sqe by Molmil
Papain-Like Protease of SARS CoV-2, C111S mutant, in complex with Jun9-84-3 inhibitor
Descriptor: (1R)-N-[(1H-indol-3-yl)methyl]-N-methyl-1-(naphthalen-1-yl)ethan-1-amine, 1,2-ETHANEDIOL, CHLORIDE ION, ...
Authors:Osipiuk, J, Tesar, C, Endres, M, Wang, J, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2021-11-05
Release date:2021-11-17
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2 Å)
Cite:Papain-Like Protease of SARS CoV-2, C111S mutant, in complex with Jun9-84-3 inhibitor
To be Published
1T9K
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BU of 1t9k by Molmil
X-ray crystal structure of aIF-2B alpha subunit-related translation initiation factor [Thermotoga maritima]
Descriptor: CHLORIDE ION, Probable methylthioribose-1-phosphate isomerase, SULFATE ION
Authors:Osipiuk, J, Skarina, T, Savchenko, A, Edwards, A, Cymborowski, M, Minor, W, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2004-05-17
Release date:2004-06-08
Last modified:2022-04-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:X-ray crystal structure of aIF-2B translation initiation factor from Thermotoga maritima
To be Published
3EGJ
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BU of 3egj by Molmil
N-acetylglucosamine-6-phosphate deacetylase from Vibrio cholerae.
Descriptor: N-acetylglucosamine-6-phosphate deacetylase, NICKEL (II) ION, SULFATE ION
Authors:Osipiuk, J, Maltseva, N, Stam, J, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2008-09-10
Release date:2008-09-23
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:X-ray crystal structure of N-acetylglucosamine-6-phosphate deacetylase from Vibrio cholerae.
To be Published
5UPT
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BU of 5upt by Molmil
Acyl-CoA synthetase PtmA2 from Streptomyces platensis in complex with SBNP468 ligand
Descriptor: (7alpha,8alpha,10alpha,13alpha)-7,16-dihydroxykauran-18-oic acid, Acyl-CoA synthetase PtmA2, CHLORIDE ION, ...
Authors:Osipiuk, J, Hatzos-Skintges, C, Endres, M, Babnigg, G, Rudolf, J.D, Chang, C.Y, Ma, M, Shen, B, Phillips Jr, G.N, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Enzyme Discovery for Natural Product Biosynthesis (NatPro)
Deposit date:2017-02-03
Release date:2017-02-22
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Natural separation of the acyl-CoA ligase reaction results in a non-adenylating enzyme.
Nat. Chem. Biol., 14, 2018
6W9C
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BU of 6w9c by Molmil
The crystal structure of papain-like protease of SARS CoV-2
Descriptor: CHLORIDE ION, Non-structural protein 3, ZINC ION
Authors:Osipiuk, J, Jedrzejczak, R, Tesar, C, Endres, M, Stols, L, Babnigg, G, Kim, Y, Michalska, K, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2020-03-22
Release date:2020-04-01
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The crystal structure of papain-like protease of SARS CoV-2
to be published
2I6H
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BU of 2i6h by Molmil
Structure of Protein of Unknown Function ATU0120 from Agrobacterium tumefaciens
Descriptor: CALCIUM ION, CHLORIDE ION, Hypothetical protein Atu0120
Authors:Osipiuk, J, Xu, X, Gu, J, Savchenko, A, Edwards, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2006-08-28
Release date:2006-09-26
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:X-ray crystal structure of hypothetical protein Atu0120 from Agrobacterium tumefaciens.
To be Published
8G62
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BU of 8g62 by Molmil
Papain-Like Protease of SARS CoV-2 in complex with remodilin NCGC 390004
Descriptor: 3-methoxy-5-(1-methylpiperidin-4-yl)-N-[4-(pyrrolidine-1-sulfonyl)phenyl]benzamide, ACETATE ION, CHLORIDE ION, ...
Authors:Osipiuk, J, Tesar, C, Endres, M, Jedrzejczak, R, Luci, D, Kales, S, Simeonov, A, Rai, G, Drayman, N, Tay, S, Oakes, S, Rosner, M, Chen, B, Dulin, N, Solway, J, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID), Center for Structural Biology of Infectious Diseases (CSBID)
Deposit date:2023-02-14
Release date:2023-02-22
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Papain-Like Protease of SARS CoV-2 in complex with remodilin NCGC 390004
To Be Published
5UTT
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BU of 5utt by Molmil
SrtA sortase from Actinomyces oris
Descriptor: CHLORIDE ION, Sortase
Authors:Osipiuk, J, Ma, X, Ton-That, H, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2017-02-15
Release date:2017-03-01
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Cell-to-cell interaction requires optimal positioning of a pilus tip adhesin modulated by gram-positive transpeptidase enzymes.
Proc.Natl.Acad.Sci.USA, 116, 2019
5UUS
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BU of 5uus by Molmil
SrtF sortase from Corynebacterium diphtheriae
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, ACETATE ION, ...
Authors:Osipiuk, J, Gornicki, P, Ton-That, H, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2017-02-17
Release date:2017-03-22
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:SrtF sortase from Corynebacterium diphtheriae
to be published
3EY5
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BU of 3ey5 by Molmil
Putative acetyltransferase from GNAT family from Bacteroides thetaiotaomicron.
Descriptor: Acetyltransferase-like, GNAT family, SULFATE ION
Authors:Osipiuk, J, Bigelow, L, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2008-10-17
Release date:2008-11-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:X-ray crystal structure of putative acetyltransferase from GNAT family from Bacteroides thetaiotaomicron.
To be Published
2I3D
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BU of 2i3d by Molmil
Crystal Structure of Protein of Unknown Function ATU1826, a Putative Alpha/Beta Hydrolase from Agrobacterium tumefaciens
Descriptor: CHLORIDE ION, Hypothetical protein Atu1826, MAGNESIUM ION
Authors:Osipiuk, J, Xu, X, Zheng, H, Savchenko, A, Edwards, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2006-08-17
Release date:2006-09-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of hypothetical protein Atu1826, a putative alpha/beta hydrolase from Agrobacterium tumefaciens.
To be Published
8T28
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BU of 8t28 by Molmil
The crystal structure of SrtC2 sortase from Actinomyces oris
Descriptor: CHLORIDE ION, Class C sortase, PHOSPHATE ION
Authors:Osipiuk, J, Chang, C, Ton-That, H.L, Ton-That, H, Joachimiak, A, Center for Structural Biology of Infectious Diseases (CSBID)
Deposit date:2023-06-05
Release date:2024-04-17
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Molecular basis for dual functions in pilus assembly modulated by the lid of a pilus-specific sortase.
J.Biol.Chem., 300, 2024
4R1H
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BU of 4r1h by Molmil
GntR family transcriptional regulator from Listeria monocytogenes
Descriptor: ACETATE ION, Lmo0741 protein
Authors:Osipiuk, J, Mack, J, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-08-05
Release date:2014-08-20
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:GntR family transcriptional regulator from Listeria monocytogenes
To be Published
6DFU
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BU of 6dfu by Molmil
Tryptophan--tRNA ligase from Haemophilus influenzae.
Descriptor: TRYPTOPHAN, Tryptophan--tRNA ligase
Authors:Osipiuk, J, Maltseva, N, Mulligan, R, Grimshaw, S, Satchell, K.J.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2018-05-15
Release date:2018-05-23
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Tryptophan--tRNA ligase from Haemophilus influenzae.
to be published
4RI0
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BU of 4ri0 by Molmil
Serine Protease HtrA3, mutationally inactivated
Descriptor: PHOSPHATE ION, Serine protease HTRA3
Authors:Osipiuk, J, Glaza, P, Wenta, T, Lipinska, B, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-10-03
Release date:2014-10-29
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.272 Å)
Cite:Structural and Functional Analysis of Human HtrA3 Protease and Its Subdomains.
Plos One, 10, 2015
6U0I
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BU of 6u0i by Molmil
Putative Antitoxin HicB3 from Escherichia coli str. K-12 substr. DH10B
Descriptor: Antitoxin HicB, CHLORIDE ION
Authors:Osipiuk, J, Tesar, C, Endres, M, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2019-08-14
Release date:2019-08-28
Last modified:2019-12-18
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Putative Antitoxin HicB3 from Escherichia coli str. K-12 substr. DH10B
to be published
2I10
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BU of 2i10 by Molmil
Putative TetR transcriptional regulator from Rhodococcus sp. RHA1
Descriptor: P-NITROPHENOL, Putative TetR transcriptional regulator, TRIETHYLENE GLYCOL
Authors:Osipiuk, J, Evdokimova, E, Kudritska, M, Savchenko, A, Edwards, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2006-08-11
Release date:2006-09-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:X-ray crystal structure of putative TetR transcriptional regulator from Rhodococcus sp. RHA1.
To be Published
8UW6
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BU of 8uw6 by Molmil
Acetylornithine deacetylase from Escherichia coli, di-zinc form.
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Acetylornithine deacetylase, ...
Authors:Osipiuk, J, Endres, M, Kelley, E, Becker, D.P, Joachimiak, A, Center for Structural Biology of Infectious Diseases (CSBID)
Deposit date:2023-11-06
Release date:2024-05-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Acetylornithine deacetylase from Escherichia coli, di-zinc form.
To Be Published
4RWU
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BU of 4rwu by Molmil
J-domain of Sis1 protein, Hsp40 co-chaperone from Saccharomyces cerevisiae
Descriptor: Protein SIS1
Authors:Osipiuk, J, Zhou, M, Gu, M, Sahi, C, Craig, E.A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-12-05
Release date:2014-12-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Roles of intramolecular and intermolecular interactions in functional regulation of the Hsp70 J-protein co-chaperone Sis1.
J.Mol.Biol., 427, 2015
6BWE
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BU of 6bwe by Molmil
Sortase A from Corynebacterium diphtheriae, lid mutant
Descriptor: Putative fimbrial associated sortase-like protein
Authors:Osipiuk, J, Chang, C, Huang, I.H, Ton-That, H, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2017-12-14
Release date:2017-12-27
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:In vitro reconstitution of sortase-catalyzed pilus polymerization reveals structural elements involved in pilin cross-linking.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
4R6I
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BU of 4r6i by Molmil
AtxA protein, a virulence regulator from Bacillus anthracis.
Descriptor: Anthrax toxin expression trans-acting positive regulator, DODECYL-BETA-D-MALTOSIDE
Authors:Osipiuk, J, Horton, L.B, Koehler, T.M, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2014-08-25
Release date:2014-10-22
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Crystal structure of Bacillus anthracis virulence regulator AtxA and effects of phosphorylated histidines on multimerization and activity.
Mol.Microbiol., 95, 2015
9ATX
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BU of 9atx by Molmil
AcpB protein from Bacillus anthracis, N-terminal part
Descriptor: Capsule synthesis positive regulator AcpB
Authors:Osipiuk, J, Koehler, T.M, Joachimiak, A, Center for Structural Biology of Infectious Diseases (CSBID)
Deposit date:2024-02-27
Release date:2024-03-06
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:AcpB protein from Bacillus anthracis, N-terminal part
To Be Published
6WRH
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BU of 6wrh by Molmil
The crystal structure of Papain-Like Protease of SARS CoV-2 , C111S mutant
Descriptor: CHLORIDE ION, GLYCEROL, Non-structural protein 3, ...
Authors:Osipiuk, J, Tesar, C, Jedrzejczak, R, Endres, M, Welk, L, Babnigg, G, Kim, Y, Michalska, K, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2020-04-29
Release date:2020-05-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure of papain-like protease from SARS-CoV-2 and its complexes with non-covalent inhibitors.
Nat Commun, 12, 2021
5WAY
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BU of 5way by Molmil
MgaSpn protein, Mga regulator from Streptococcus pneumoniae
Descriptor: GLYCEROL, NICKEL (II) ION, POTASSIUM ION, ...
Authors:Osipiuk, J.
Deposit date:2017-06-27
Release date:2017-07-05
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:MgaSpn protein, Mga regulator from Streptococcus pneumoniae
To Be Published
6BO0
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BU of 6bo0 by Molmil
MdbA protein, a thiol-disulfide oxidoreductase from Corynebacterium matruchotii
Descriptor: MdbA protein, TETRAETHYLENE GLYCOL
Authors:Osipiuk, J, Luong, T.Y, Trigar, R, Ton-That, H, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2017-11-17
Release date:2017-12-13
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structural Basis of a Thiol-Disulfide Oxidoreductase in the Hedgehog-Forming Actinobacterium Corynebacterium matruchotii.
J. Bacteriol., 200, 2018

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