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PDB: 37 results

3PDY
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BU of 3pdy by Molmil
Structure of the third and fourth spectrin repeats of the plakin domain of plectin
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Plectin
Authors:Ortega, E, de Pereda, J.M.
Deposit date:2010-10-25
Release date:2011-02-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.2182 Å)
Cite:The Structure of the Plakin Domain of Plectin Reveals a Non-canonical SH3 Domain Interacting with Its Fourth Spectrin Repeat.
J.Biol.Chem., 286, 2011
3PE0
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BU of 3pe0 by Molmil
Structure of the central region of the plakin domain of plectin
Descriptor: CALCIUM ION, Plectin
Authors:Ortega, E, de Pereda, J.M.
Deposit date:2010-10-25
Release date:2011-02-02
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:The Structure of the Plakin Domain of Plectin Reveals a Non-canonical SH3 Domain Interacting with Its Fourth Spectrin Repeat.
J.Biol.Chem., 286, 2011
5J1H
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BU of 5j1h by Molmil
Structure of the spectrin repeats 5 and 6 of the plakin domain of plectin
Descriptor: Plectin,Plectin
Authors:Ortega, E, DE PEREDA, J.M.
Deposit date:2016-03-29
Release date:2016-07-20
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The Structure of the Plakin Domain of Plectin Reveals an Extended Rod-like Shape.
J.Biol.Chem., 291, 2016
5J1I
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BU of 5j1i by Molmil
Structure of the spectrin repeats 7, 8, and 9 of the plakin domain of plectin
Descriptor: Plectin
Authors:Ortega, E, DE PEREDA, J.M.
Deposit date:2016-03-29
Release date:2016-07-20
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.801 Å)
Cite:The Structure of the Plakin Domain of Plectin Reveals an Extended Rod-like Shape.
J.Biol.Chem., 291, 2016
5J1F
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BU of 5j1f by Molmil
Structure of the spectrin repeats 5 and 6 of the plakin domain of plectin
Descriptor: Plectin,Plectin
Authors:Ortega, E, DE PEREDA, J.M.
Deposit date:2016-03-29
Release date:2016-07-20
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (3 Å)
Cite:The Structure of the Plakin Domain of Plectin Reveals an Extended Rod-like Shape.
J.Biol.Chem., 291, 2016
5J1G
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BU of 5j1g by Molmil
Structure of the spectrin repeats 7 and 8 of the plakin domain of plectin
Descriptor: 1,2-ETHANEDIOL, PENTAETHYLENE GLYCOL, Plectin
Authors:Ortega, E, DE PEREDA, J.M.
Deposit date:2016-03-29
Release date:2016-07-20
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The Structure of the Plakin Domain of Plectin Reveals an Extended Rod-like Shape.
J.Biol.Chem., 291, 2016
7NL2
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BU of 7nl2 by Molmil
Structure of Xyn11 from Pseudothermotoga thermarum
Descriptor: 1-methylethyl 1-thio-beta-D-galactopyranoside, Beta-xylanase, GLYCEROL
Authors:Jimenez-Ortega, E, Sanz-Aparicio, J.
Deposit date:2021-02-22
Release date:2021-06-09
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Phylogenetic, functional and structural characterization of a GH10 xylanase active at extreme conditions of temperature and alkalinity
Comput Struct Biotechnol J, 19, 2021
6EPB
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BU of 6epb by Molmil
Structure of Chitinase 42 from Trichoderma harzianum
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, Endochitinase 42, ...
Authors:Ramirez-Escudero, M, Jimenez-Ortega, E, Sanz-Aparicio, J.
Deposit date:2017-10-11
Release date:2018-09-26
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Use of chitin and chitosan to produce new chitooligosaccharides by chitinase Chit42: enzymatic activity and structural basis of protein specificity.
Microb. Cell Fact., 17, 2018
6S6Z
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BU of 6s6z by Molmil
Structure of beta-Galactosidase from Thermotoga maritima
Descriptor: Beta-galactosidase, MAGNESIUM ION
Authors:Miguez-Amil, S, Jimenez-Ortega, E, Ramirez Escudero, M, Sanz-Aparicio, J, Fernandez-Leiro, R.
Deposit date:2019-07-04
Release date:2020-03-18
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (2 Å)
Cite:The cryo-EM Structure ofThermotoga maritimabeta-Galactosidase: Quaternary Structure Guides Protein Engineering.
Acs Chem.Biol., 15, 2020
7ZY9
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BU of 7zy9 by Molmil
Structure of D165A/D167A double mutant of Chit33 from Trichoderma harzianum complexed with chitintetraose.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Endochitinase 33
Authors:Jimenez-Ortega, E, Sanz-Aparicio, J.
Deposit date:2022-05-24
Release date:2022-08-31
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure-Function Insights into the Fungal Endo -Chitinase Chit33 Depict its Mechanism on Chitinous Material.
Int J Mol Sci, 23, 2022
7ZYA
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BU of 7zya by Molmil
Structure of Chit33 from Trichoderma harzianum.
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DI(HYDROXYETHYL)ETHER, Endochitinase 33, ...
Authors:Jimenez-Ortega, E, Sanz-Aparicio, J.
Deposit date:2022-05-24
Release date:2022-08-31
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.12 Å)
Cite:Structure-Function Insights into the Fungal Endo -Chitinase Chit33 Depict its Mechanism on Chitinous Material.
Int J Mol Sci, 23, 2022
6QWI
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BU of 6qwi by Molmil
Structure of beta-glucosidase A from Paenibacillus polymyxa complexed with multivalent inhibitors.
Descriptor: (2~{S},3~{S},4~{R})-2-[[4-[4-(2-ethoxyethoxy)phenyl]-1,2,3-triazol-1-yl]methyl]pyrrolidine-3,4-diol, Beta-glucosidase A
Authors:Jimenez-Ortega, E, Sanz-Aparicio, J.
Deposit date:2019-03-05
Release date:2019-07-03
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Structural basis of the inhibition of GH1 beta-glucosidases by multivalent pyrrolidine iminosugars.
Bioorg.Chem., 89, 2019
6R4K
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BU of 6r4k by Molmil
Structure of beta-glucosidase A from Paenibacillus polymyxa complexed with a monovalent inhibitor
Descriptor: (2~{S},3~{S},4~{R})-2-[[4-[4-[2-[2-(2-azanylidenehydrazinyl)ethoxy]ethoxy]phenyl]-1,2,3-triazol-1-yl]methyl]pyrrolidine-3,4-diol, Beta-glucosidase A
Authors:Jimenez-Ortega, E, Sanz-Aparicio, J.
Deposit date:2019-03-22
Release date:2019-07-03
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Structural basis of the inhibition of GH1 beta-glucosidases by multivalent pyrrolidine iminosugars.
Bioorg.Chem., 89, 2019
8BET
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BU of 8bet by Molmil
Structure of D188A-fructofuranosidase from Rhodotorula dairenesis in complex with sucrose
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-fructofuranosidase, ...
Authors:Jimenez-Ortega, E, Sanz-Aparicio, J.
Deposit date:2022-10-21
Release date:2022-12-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:Insights into the Structure of the Highly Glycosylated Ffase from Rhodotorula dairenensis Enhance Its Biotechnological Potential.
Int J Mol Sci, 23, 2022
8BES
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BU of 8bes by Molmil
Structure of D188A-fructofuranosidase from Rhodotorula dairenensis in complex with fructose
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Jimenez-Ortega, E, Sanz-Aparicio, J.
Deposit date:2022-10-21
Release date:2022-12-28
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Insights into the Structure of the Highly Glycosylated Ffase from Rhodotorula dairenensis Enhance Its Biotechnological Potential.
Int J Mol Sci, 23, 2022
8BEQ
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BU of 8beq by Molmil
Structure of fructofuranosidase from Rhodotorula dairenensis
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Jimenez-Ortega, E, Sanz-Aparicio, J.
Deposit date:2022-10-21
Release date:2022-12-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Insights into the Structure of the Highly Glycosylated Ffase from Rhodotorula dairenensis Enhance Its Biotechnological Potential.
Int J Mol Sci, 23, 2022
8BEU
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BU of 8beu by Molmil
Structure of D188A-fructofuranosidase from Rhodotorula dairenensis in complex with raffinose
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-fructofuranosidase, ...
Authors:Jimenez-Ortega, E, Sanz-Aparicio, J.
Deposit date:2022-10-21
Release date:2022-12-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Insights into the Structure of the Highly Glycosylated Ffase from Rhodotorula dairenensis Enhance Its Biotechnological Potential.
Int J Mol Sci, 23, 2022
7AKQ
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BU of 7akq by Molmil
Structure of D169A/E171A double mutant of chitinase Chit42 from Trichoderma harzianum complexed with chitintetraose obtained by soaking.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, ...
Authors:Jimenez-Ortega, E, Sanz-Aparicio, J.
Deposit date:2020-10-01
Release date:2021-10-20
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Structural inspection and protein motions modelling of a fungal glycoside hydrolase family 18 chitinase by crystallography depicts a dynamic enzymatic mechanism
Comput Struct Biotechnol J, 19, 2021
6YLJ
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BU of 6ylj by Molmil
Structure of D169A/E171A double mutant of chitinase Chit42 from Trichoderma harzianum complexed with chitinhexaose.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, Endochitinase 42, ...
Authors:Jimenez-Ortega, E, Sanz-Aparicio, J.
Deposit date:2020-04-07
Release date:2021-10-20
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural inspection and protein motions modelling of a fungal glycoside hydrolase family 18 chitinase by crystallography depicts a dynamic enzymatic mechanism
Comput Struct Biotechnol J, 19, 2021
6YN4
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BU of 6yn4 by Molmil
Structure of D169A/E171A double mutant of chitinase Chit42 from Trichoderma harzianum complexed with chitintetraose.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, ...
Authors:Jimenez-Ortega, E, Sanz-Aparicio, J.
Deposit date:2020-04-10
Release date:2021-10-20
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Structural inspection and protein motions modelling of a fungal glycoside hydrolase family 18 chitinase by crystallography depicts a dynamic enzymatic mechanism
Comput Struct Biotechnol J, 19, 2021
4BHW
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BU of 4bhw by Molmil
Structural basis for autoinhibition of the acetyltransferase activity of p300
Descriptor: HISTONE ACETYLTRANSFERASE P300, ZINC ION, [(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-4-hydroxy-3-(phosphonooxy)tetrahydrofuran-2-yl]methyl (3R,20R)-20-carbamoyl-3-hydroxy-2,2-dimethyl-4,8,14,22-tetraoxo-12-thia-5,9,15,21-tetraazatricos-1-yl dihydrogen diphosphate
Authors:Delvecchio, M, Gaucher, J, Aguilar-Gurrieri, C, Ortega, E, Panne, D.
Deposit date:2013-04-08
Release date:2013-08-14
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.799 Å)
Cite:Structure of the P300 Catalytic Core and Implications for Chromatin Targeting and Hat Regulation
Nat.Struct.Mol.Biol., 20, 2013
6S1T
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BU of 6s1t by Molmil
Structure of beta-fructofuranosidase from Schwanniomyces occidentalis complexed with sucrose
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Jimenez-Ortega, E, Sanz-Aparicio, J.
Deposit date:2019-06-19
Release date:2021-04-28
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:New insights into the molecular mechanism behind mannitol and erythritol fructosylation by beta-fructofuranosidase from Schwanniomyces occidentalis.
Sci Rep, 11, 2021
6S2B
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BU of 6s2b by Molmil
Structure of beta-fructofuranosidase from Schwanniomyces occidentalis complexed with fructosyl-erythritol
Descriptor: (2~{S},3~{R})-4-[(2~{R},3~{S},4~{S},5~{R})-2,5-bis(hydroxymethyl)-3,4-bis(oxidanyl)oxolan-2-yl]oxybutane-1,2,3-triol, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Jimenez-Ortega, E, Sanz-Aparicio, J.
Deposit date:2019-06-20
Release date:2021-04-28
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:New insights into the molecular mechanism behind mannitol and erythritol fructosylation by beta-fructofuranosidase from Schwanniomyces occidentalis.
Sci Rep, 11, 2021
6SD0
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BU of 6sd0 by Molmil
Structure of beta-galactosidase from Thermotoga maritima.
Descriptor: Beta-galactosidase, MAGNESIUM ION
Authors:Jimenez-Ortega, E, Ramirez-Escudero, M, Sanz-Aparicio, J.
Deposit date:2019-07-26
Release date:2020-01-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:The cryo-EM Structure ofThermotoga maritimabeta-Galactosidase: Quaternary Structure Guides Protein Engineering.
Acs Chem.Biol., 15, 2020
6SHY
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BU of 6shy by Molmil
Structure of L320A/H321S double mutant of Rex8A from Paenibacillus barcinonensis
Descriptor: 1,2-ETHANEDIOL, Reducing-end xylose-releasing exo-oligoxylanase Rex8A
Authors:Jimenez-Ortega, E, Ramirez-Escudero, M, Sanz-Aparicio, J.
Deposit date:2019-08-08
Release date:2020-05-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Structural analysis of the reducing-end xylose-releasing exo-oligoxylanase Rex8A from Paenibacillus barcinonensis BP-23 deciphers its molecular specificity.
Febs J., 287, 2020

 

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