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PDB: 469 results

6QX4
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BU of 6qx4 by Molmil
Structure of the Bacillus anthracis Sap S-layer assembly domain
Descriptor: Nanobody NbAF683, Nanobody NbAF694, S-layer protein sap
Authors:Remaut, H, Fioravanti, A.
Deposit date:2019-03-07
Release date:2019-07-31
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.27 Å)
Cite:Structure of S-layer protein Sap reveals a mechanism for therapeutic intervention in anthrax.
Nat Microbiol, 4, 2019
6PV4
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BU of 6pv4 by Molmil
Structure of CpGH84A
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, Glycoside Hydrolase
Authors:Pluvinage, B, Boraston, A.B.
Deposit date:2019-07-19
Release date:2019-09-11
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural and functional analysis of four family 84 glycoside hydrolases from the opportunistic pathogen Clostridium perfringens.
Glycobiology, 30, 2019
6PTM
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BU of 6ptm by Molmil
Crystal structure of apo exo-carrageenase GH42 from Bacteroides ovatus
Descriptor: 1,2-ETHANEDIOL, Uncharacterized protein
Authors:Hettle, A.G, Boraston, A.B.
Deposit date:2019-07-16
Release date:2019-09-25
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Insights into the kappa / iota-carrageenan metabolism pathway of some marinePseudoalteromonasspecies.
Commun Biol, 2, 2019
1OIF
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BU of 1oif by Molmil
Family 1 b-glucosidase from Thermotoga maritima
Descriptor: 5-HYDROXYMETHYL-3,4-DIHYDROXYPIPERIDINE, BETA-GLUCOSIDASE
Authors:Gloster, T, Zechel, D, Boraston, A.B, Boraston, C.M, Macdonald, J.M, Tilbrook, D.M, Stick, R.V, Davies, G.J.
Deposit date:2003-06-16
Release date:2003-11-25
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Iminosugar Glycosidase Inhibitors: Structural and Thermodynamic Dissection of the Binding of Isofagomine and 1-Deoxynojirimycin to Beta-Glucosidases
J.Am.Chem.Soc., 125, 2003
1OIM
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BU of 1oim by Molmil
Family 1 b-glucosidase from Thermotoga maritima
Descriptor: 1-DEOXYNOJIRIMYCIN, BETA-GLUCOSIDASE A
Authors:Gloster, T, Zechel, D.L, Boraston, A.B, Boraston, C.M, Macdonald, J.M, Tilbrook, D.M, Stick, R.V, Davies, G.J.
Deposit date:2003-06-19
Release date:2003-11-25
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Iminosugar Glycosidase Inhibitors: Structural and Thermodynamic Dissection of the Binding of Isofagomine and 1-Deoxynojirimycin to Beta-Glucosidases
J.Am.Chem.Soc., 125, 2003
6XSZ
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BU of 6xsz by Molmil
The structure of the M60 catalytic domain from Clostridium perfringens ZmpC
Descriptor: 1,2-ETHANEDIOL, ZINC ION, ZmpC Glycopeptidase
Authors:Pluvinage, B, Boraston, A.B.
Deposit date:2020-07-16
Release date:2021-02-03
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Molecular insights into architecturally complex glycopeptidases
Proc.Natl.Acad.Sci.USA, 2021
7Y52
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BU of 7y52 by Molmil
Crystal structure of peptidyl-tRNA hydrolase from Enterococcus faecium
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Peptidyl-tRNA hydrolase, ...
Authors:Pandey, R, Zohib, M, Mundra, S, Pal, R.K, Arora, A.
Deposit date:2022-06-16
Release date:2024-01-17
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Crystal structure of peptidyl-tRNA hydrolase from Enterococcus faecium
To Be Published
5IVP
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BU of 5ivp by Molmil
Crystal structure of the Peptidyl-tRNA hydrolase from Vibrio cholerae in the C121 space group at pH 6.5
Descriptor: CITRATE ANION, Peptidyl-tRNA hydrolase
Authors:Shahid, S, Kabra, A, Pal, R.K, Arora, A.
Deposit date:2016-03-21
Release date:2017-03-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Crystal structure of the Peptidyl-tRNA hydrolase from Vibrio cholerae in the C121 space group at pH 6.5
To Be Published
1OIN
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BU of 1oin by Molmil
Family 1 b-glucosidase from Thermotoga maritima
Descriptor: 2-deoxy-2-fluoro-alpha-D-glucopyranose, BETA-GLUCOSIDASE A
Authors:Gloster, T, Zechel, D.L, Boraston, A.B, Boraston, C.M, Macdonald, J.M, Tilbrook, D.M, Stick, R.V, Davies, G.J.
Deposit date:2003-06-19
Release date:2003-11-25
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Iminosugar Glycosidase Inhibitors: Structural and Thermodynamic Dissection of the Binding of Isofagomine and 1-Deoxynojirimycin to Beta-Glucosidases
J.Am.Chem.Soc., 125, 2003
4B8S
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BU of 4b8s by Molmil
Crystal Structure of Thermococcus litoralis ADP-dependent Glucokinase (GK)
Descriptor: ADENOSINE MONOPHOSPHATE, ADP-DEPENDENT GLUCOKINASE, GLYCEROL, ...
Authors:Herrera-Morande, A, Rivas-Pardo, J.A, Fernandez, F.J, Guixe, V, Vega, M.C.
Deposit date:2012-08-30
Release date:2013-07-10
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.58 Å)
Cite:Crystal Structure, Saxs and Kinetic Mechanism of Hyperthermophilic Adp-Dependent Glucokinase from Thermococcus Litoralis Reveal a Conserved Mechanism for Catalysis.
Plos One, 8, 2013
6Q1N
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BU of 6q1n by Molmil
Glucocerebrosidase in complex with pharmacological chaperone IMX8
Descriptor: (2R,3S,4S,5R)-2-[2-(methylsulfanyl)ethyl]piperidine-3,4,5-triol, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Vickers, C, Withers, S.G, Boraston, A.B.
Deposit date:2019-08-05
Release date:2020-08-19
Method:X-RAY DIFFRACTION (2.526 Å)
Cite:Pharmacological chaperones for GCase that switch conformation with pH enhance enzyme levels in Gaucher animal models.
To Be Published
5FQG
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BU of 5fqg by Molmil
The details of glycolipid glycan hydrolysis by the structural analysis of a family 123 glycoside hydrolase from Clostridium perfringens
Descriptor: 2-acetamido-2-deoxy-beta-D-galactopyranose-(1-3)-beta-D-galactopyranose, BETA-N-ACETYLGALACTOSAMINIDASE, FORMIC ACID
Authors:Noach, I, Pluvinage, B, Laurie, C, Abe, K.T, Alteen, M, Vocadlo, D.J, Boraston, A.B.
Deposit date:2015-12-10
Release date:2016-03-30
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The Details of Glycolipid Glycan Hydrolysis by the Structural Analysis of a Family 123 Glycoside Hydrolase from Clostridium Perfringens
J.Mol.Biol., 428, 2016
7JW4
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BU of 7jw4 by Molmil
Crystal structure of PdGH110B in complex with D-galactose
Descriptor: CHLORIDE ION, Glycoside hydrolase family 110, NICKEL (II) ION, ...
Authors:Hettle, A.G, Boraston, A.B.
Deposit date:2020-08-24
Release date:2020-11-04
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.342 Å)
Cite:The structure of a family 110 glycoside hydrolase provides insight into the hydrolysis of alpha-1,3-galactosidic linkages in lambda-carrageenan and blood group antigens.
J.Biol.Chem., 295, 2020
7JWF
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BU of 7jwf by Molmil
Crystal structure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose
Descriptor: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ACETATE ION, ...
Authors:Hettle, A.G, Boraston, A.B.
Deposit date:2020-08-25
Release date:2020-11-04
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.187 Å)
Cite:The structure of a family 110 glycoside hydrolase provides insight into the hydrolysis of alpha-1,3-galactosidic linkages in lambda-carrageenan and blood group antigens.
J.Biol.Chem., 295, 2020
5FQH
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BU of 5fqh by Molmil
The details of glycolipid glycan hydrolysis by the structural analysis of a family 123 glycoside hydrolase from Clostridium perfringens
Descriptor: 2-acetamido-2-deoxy-beta-D-galactopyranose-(1-4)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose, BETA-N-ACETYLGALACTOSAMINIDASE, PHOSPHATE ION
Authors:Noach, I, Pluvinage, B, Laurie, C, Abe, K.T, Alteen, M, Vocadlo, D.J, Boraston, A.B.
Deposit date:2015-12-10
Release date:2016-03-30
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The Details of Glycolipid Glycan Hydrolysis by the Structural Analysis of a Family 123 Glycoside Hydrolase from Clostridium Perfringens
J.Mol.Biol., 428, 2016
5FR0
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BU of 5fr0 by Molmil
The details of glycolipid glycan hydrolysis by the structural analysis of a family 123 glycoside hydrolase from Clostridium perfringens
Descriptor: 2-deoxy-2-[(difluoroacetyl)amino]-beta-D-galactopyranose, BETA-N-ACETYLGALACTOSAMINIDASE, PHOSPHATE ION
Authors:Noach, I, Pluvinage, B, Laurie, C, Abe, K.T, Alteen, M, Vocadlo, D.J, Boraston, A.B.
Deposit date:2015-12-14
Release date:2016-03-30
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:The Details of Glycolipid Glycan Hydrolysis by the Structural Analysis of a Family 123 Glycoside Hydrolase from Clostridium Perfringens
J.Mol.Biol., 428, 2016
5FQF
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BU of 5fqf by Molmil
The details of glycolipid glycan hydrolysis by the structural analysis of a family 123 glycoside hydrolase from Clostridium perfringens
Descriptor: 2-acetamido-2-deoxy-beta-D-galactopyranose, BETA-N-ACETYLGALACTOSAMINIDASE, FORMIC ACID
Authors:Noach, I, Pluvinage, B, Laurie, C, Abe, K.T, Alteen, M, Vocadlo, D.J, Boraston, A.B.
Deposit date:2015-12-10
Release date:2016-03-30
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:The Details of Glycolipid Glycan Hydrolysis by the Structural Analysis of a Family 123 Glycoside Hydrolase from Clostridium Perfringens
J.Mol.Biol., 428, 2016
6PSM
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BU of 6psm by Molmil
Crystal structure of PsS1_19B C77S in complex with kappa-neocarrabiose
Descriptor: 1,2-ETHANEDIOL, 3,6-anhydro-D-galactose, 4-O-sulfo-beta-D-galactopyranose, ...
Authors:Hettle, A.G, Boraston, A.B.
Deposit date:2019-07-12
Release date:2019-09-25
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Insights into the kappa / iota-carrageenan metabolism pathway of some marinePseudoalteromonasspecies.
Commun Biol, 2, 2019
6PT9
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BU of 6pt9 by Molmil
Crystal structure of PsS1_NC C84S in complex with k-neocarrabiose
Descriptor: 1,2-ETHANEDIOL, 3,6-anhydro-D-galactose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Hettle, A.G, Boraston, A.B.
Deposit date:2019-07-15
Release date:2019-09-25
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Insights into the kappa / iota-carrageenan metabolism pathway of some marinePseudoalteromonasspecies.
Commun Biol, 2, 2019
6Q1P
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BU of 6q1p by Molmil
Glucocerebrosidase in complex with pharmacological chaperone norIMX8
Descriptor: (2S,3S,4S,5R)-2-{[(4-methylpentyl)sulfonyl]methyl}piperidine-3,4,5-triol, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Vickers, C, Withers, S.G, Boraston, A.B.
Deposit date:2019-08-05
Release date:2020-08-19
Method:X-RAY DIFFRACTION (2.796 Å)
Cite:Pharmacological chaperones for GCase that switch conformation with pH enhance enzyme levels in Gaucher animal models.
To Be Published
6PSO
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BU of 6pso by Molmil
Crystal structure of PsS1_19B C77S in complex with iota-neocarratetraose
Descriptor: 3,6-anhydro-2-O-sulfo-alpha-D-galactopyranose-(1-3)-4-O-sulfo-beta-D-galactopyranose-(1-4)-3,6-anhydro-2-O-sulfo-alpha-D-galactopyranose-(1-3)-4-O-sulfo-beta-D-galactopyranose, CALCIUM ION, CHLORIDE ION, ...
Authors:Hettle, A.G, Boraston, A.B.
Deposit date:2019-07-13
Release date:2019-09-25
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2 Å)
Cite:Insights into the kappa / iota-carrageenan metabolism pathway of some marinePseudoalteromonasspecies.
Commun Biol, 2, 2019
6PT6
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BU of 6pt6 by Molmil
Crystal structure of PsS1_NC C84S in complex with i-neocarratetraose
Descriptor: 3,6-anhydro-2-O-sulfo-alpha-D-galactopyranose-(1-3)-4-O-sulfo-beta-D-galactopyranose, CALCIUM ION, exo-2S-iota carrageenan S1 sulfatase
Authors:Hettle, A.G, Boraston, A.B.
Deposit date:2019-07-15
Release date:2019-09-25
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Insights into the kappa / iota-carrageenan metabolism pathway of some marinePseudoalteromonasspecies.
Commun Biol, 2, 2019
5EKT
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BU of 5ekt by Molmil
Crystal structure of mutant-K146A of peptidyl-tRNA hydrolase from Vibrio cholerae at 1.63A resolution.
Descriptor: CITRATE ANION, Peptidyl-tRNA hydrolase
Authors:Shahid, S, Kabr, A, Pal, R.K, Arora, A.
Deposit date:2015-11-04
Release date:2016-11-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Crystal structure of mutant-K146A of peptidyl-tRNA hydrolase from Vibrio cholerae at 1.63A resolution.
To be published
6DRR
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BU of 6drr by Molmil
Crystal structure of Cj0485 dehydrogenase
Descriptor: 1,2-ETHANEDIOL, Short-chain dehydrogenase
Authors:Pluvinage, B, Boraston, A.B.
Deposit date:2018-06-12
Release date:2019-07-10
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.599 Å)
Cite:The gastrointestinal pathogen Campylobacter jejuni metabolizes sugars with potential help from commensal Bacteroides vulgatus.
Commun Biol, 3, 2020
6DS1
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BU of 6ds1 by Molmil
Crystal structure of Cj0485 dehydrogenase in complex with NADP+
Descriptor: GLYCEROL, MAGNESIUM ION, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Pluvinage, B, Boraston, A.B.
Deposit date:2018-06-13
Release date:2019-07-10
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.119 Å)
Cite:The gastrointestinal pathogen Campylobacter jejuni metabolizes sugars with potential help from commensal Bacteroides vulgatus.
Commun Biol, 3, 2020

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