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PDB: 140 results
1KA9
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BU of 1ka9 by Molmil
Imidazole Glycerol Phosphate Synthase
Descriptor: imidazole glycerol phosphate synthase
Authors:Omi, R, Miyahara, I, Hirotsu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2001-11-01
Release date:2002-12-04
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of imidazole glycerol phosphate synthase from Thermus thermophilus HB8: open-closed conformational change and ammonia tunneling.
J.Biochem., 132, 2002
2DOU
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BU of 2dou by Molmil
probable N-succinyldiaminopimelate aminotransferase (TTHA0342) from Thermus thermophilus HB8
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, SULFATE ION, probable N-succinyldiaminopimelate aminotransferase
Authors:Omi, R, Goto, M, Miyahara, I, Hirotsu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-05-03
Release date:2006-11-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:probable N-succinyldiaminopimelate aminotransferase (TTHA0342) from Thermus thermophilus HB8
To be published
2DQ4
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BU of 2dq4 by Molmil
Crystal structure of threonine 3-dehydrogenase
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, L-threonine 3-dehydrogenase, ZINC ION
Authors:Omi, R, Yao, T, Goto, M, Miyahara, I, Hirotsu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-05-19
Release date:2007-06-12
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of threonine 3-dehydrogenase
To be Published
3A9Z
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BU of 3a9z by Molmil
Crystal structure of ras selenocysteine lyase in complex with selenopropionate
Descriptor: 3-selanylpropanoic acid, PHOSPHATE ION, PYRIDOXAL-5'-PHOSPHATE, ...
Authors:Omi, R, Hirotsu, K.
Deposit date:2009-11-09
Release date:2010-03-16
Last modified:2013-10-30
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Reaction mechanism and molecular basis for selenium/sulfur discrimination of selenocysteine lyase.
J.Biol.Chem., 285, 2010
3A9Y
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BU of 3a9y by Molmil
Crystal structure of rat selenocysteine lyase in complex with L-cysteine
Descriptor: CYSTEINE, GLYCEROL, PHOSPHATE ION, ...
Authors:Omi, R, Hirotsu, K.
Deposit date:2009-11-09
Release date:2010-03-16
Last modified:2013-10-30
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Reaction mechanism and molecular basis for selenium/sulfur discrimination of selenocysteine lyase.
J.Biol.Chem., 285, 2010
3B12
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BU of 3b12 by Molmil
Crystal Structure of the Fluoroacetate Dehalogenase D104 mutant from Burkholderia sp. FA1 in complex with fluoroacetate
Descriptor: Fluoroacetate dehalogenase, MAGNESIUM ION, fluoroacetic acid
Authors:Omi, R, Hirotsu, K.
Deposit date:2011-06-19
Release date:2012-06-20
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Substrate specificity of fluoroacetate dehalogenase: an insight from crystallographic analysis, fluorescence spectroscopy, and theoretical computations
Chemistry, 18, 2012
3A9X
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BU of 3a9x by Molmil
Crystal structure of rat selenocysteine lyase
Descriptor: PHOSPHATE ION, PYRIDOXAL-5'-PHOSPHATE, Selenocysteine lyase
Authors:Omi, R, Hirotsu, K.
Deposit date:2009-11-08
Release date:2010-03-16
Last modified:2013-10-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Reaction mechanism and molecular basis for selenium/sulfur discrimination of selenocysteine lyase.
J.Biol.Chem., 285, 2010
1UIM
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BU of 1uim by Molmil
Crystal Structure of Threonine Synthase from Thermus Thermophilus HB8, Orthorhombic Crystal Form
Descriptor: PYRIDOXAL-5'-PHOSPHATE, Threonine Synthase
Authors:Omi, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-07-17
Release date:2003-11-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal Structures of Threonine Synthase from Thermus thermophilus HB8: Conformational change, substrate recognition, and mechanism.
J.BIOL.CHEM., 278, 2003
1UIN
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BU of 1uin by Molmil
Crystal Structure of Threonine Synthase from Thermus Thermophilus HB8, Trigonal Crystal Form
Descriptor: PYRIDOXAL-5'-PHOSPHATE, SULFATE ION, Threonine Synthase
Authors:Omi, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-07-17
Release date:2003-11-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal Structures of Threonine Synthase from Thermus thermophilus HB8: Conformational change, substrate recognition, and mechanism.
J.BIOL.CHEM., 278, 2003
1VE4
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BU of 1ve4 by Molmil
ATP-Phosphoribosyltransferase(hisG) from Thermus thermophilus HB8
Descriptor: ATP phosphoribosyltransferase, GLYCEROL, SULFATE ION
Authors:Omi, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-03-27
Release date:2005-06-21
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Crystal structure of ATP-phosphoribosyltransferase(HisG)
To be Published
1V7C
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BU of 1v7c by Molmil
Crystal structure of threonine synthase from thermus thermophilus hb8 in complex with a substrate analogue
Descriptor: (2E)-2-[({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)AMINO]-5-PHOSPHONOPENT-2-ENOIC ACID, THREONINE SYNTHASE
Authors:Omi, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-12-16
Release date:2003-12-30
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures of threonine synthase from Thermus thermophilus HB8: conformational change, substrate recognition, and mechanism.
J.Biol.Chem., 278, 2003
1Y37
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BU of 1y37 by Molmil
Structure of Fluoroacetate Dehalogenase from Burkholderia sp. FA1
Descriptor: Fluoroacetate Dehalogenase, MAGNESIUM ION
Authors:Omi, R.
Deposit date:2004-11-23
Release date:2006-02-28
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal Structure of Fluoroacetate Dehalogenase FA1
To be Published
2YXO
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BU of 2yxo by Molmil
Histidinol Phosphate Phosphatase complexed with Sulfate
Descriptor: FE (III) ION, GLYCEROL, Histidinol phosphatase, ...
Authors:Omi, R.
Deposit date:2007-04-26
Release date:2007-11-27
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal Structure of Monofunctional Histidinol Phosphate Phosphatase from Thermus thermophilus HB8.
Biochemistry, 46, 2007
2YZ5
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BU of 2yz5 by Molmil
Histidinol Phosphate Phosphatase complexed with Phosphate
Descriptor: FE (III) ION, GLYCEROL, Histidinol phosphatase, ...
Authors:Omi, R.
Deposit date:2007-05-03
Release date:2007-11-27
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure of Monofunctional Histidinol Phosphate Phosphatase from Thermus thermophilus HB8.
Biochemistry, 46, 2007
2Z4G
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BU of 2z4g by Molmil
Histidinol Phosphate Phosphatase from Thermus thermophilus HB8
Descriptor: FE (III) ION, GLYCEROL, Histidinol phosphatase, ...
Authors:Omi, R.
Deposit date:2007-06-17
Release date:2007-11-27
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of Monofunctional Histidinol Phosphate Phosphatase from Thermus thermophilus HB8.
Biochemistry, 46, 2007
2EJV
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BU of 2ejv by Molmil
Crystal structure of threonine 3-dehydrogenase complexed with NAD+
Descriptor: L-threonine 3-dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ZINC ION
Authors:Omi, R, Yao, T, Goto, M, Miyahara, I, Hirotsu, K.
Deposit date:2007-03-20
Release date:2008-03-25
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Crystal structure of threonine 3-dehydrogenase
To be Published
2EJW
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BU of 2ejw by Molmil
Homoserine Dehydrogenase from Thermus thermophilus HB8
Descriptor: GLYCEROL, Homoserine dehydrogenase, MAGNESIUM ION, ...
Authors:Omi, R, Goto, M, Miyahara, I, Hirotsu, K.
Deposit date:2007-03-21
Release date:2008-02-12
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure of Homoserine Dehydrogenase from Thermus thermophilus HB8
To be Published
1WLY
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BU of 1wly by Molmil
Crystal Structure of 2-Haloacrylate Reductase
Descriptor: 2-haloacrylate reductase
Authors:Omi, R.
Deposit date:2004-06-30
Release date:2005-10-04
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal Structure of 2-Haloacrylate Reductase
To be Published
1VB3
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BU of 1vb3 by Molmil
Crystal Structure of Threonine Synthase from Escherichia coli
Descriptor: 2-OXO-5-PHOSPHONOPENTANOIC ACID, SULFATE ION, Threonine synthase
Authors:Omi, R.
Deposit date:2004-02-21
Release date:2005-06-21
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of Threonine Synthase from Escherichia coli
To be Published
1V72
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BU of 1v72 by Molmil
Crystal Structure of Phenylserine Aldolase from Pseudomonas Putida
Descriptor: Aldolase, PYRIDOXAL-5'-PHOSPHATE, ZINC ION
Authors:Omi, R.
Deposit date:2003-12-09
Release date:2005-03-01
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal Structure of Phenylserine Aldolase from Pseudomonas Putida
To be Published
6PSD
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BU of 6psd by Molmil
Complex of CRACR2a with a Dynein Light Intermediate Chain Peptide
Descriptor: CALCIUM ION, EF-hand calcium-binding domain-containing protein 4B, cDNA FLJ10219 fis, ...
Authors:Dominguez, R, Lee, I.G.
Deposit date:2019-07-12
Release date:2020-07-15
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.66 Å)
Cite:A tunable LIC1-adaptor interaction modulates dynein activity in a cargo-specific manner.
Nat Commun, 11, 2020
6PSE
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BU of 6pse by Molmil
Complex of BICD2 with a Dynein Light Intermediate Chain Peptide
Descriptor: Cytoplasmic dynein 1 light intermediate chain 1, Protein bicaudal D homolog 2
Authors:Dominguez, R, Lee, I.G.
Deposit date:2019-07-12
Release date:2020-07-15
Last modified:2021-07-28
Method:X-RAY DIFFRACTION (2.404 Å)
Cite:A tunable LIC1-adaptor interaction modulates dynein activity in a cargo-specific manner.
Nat Commun, 11, 2020
1CEN
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BU of 1cen by Molmil
CELLULASE (CELC) MUTANT WITH GLU 140 REPLACED BY GLN COMPLEXED WITH CELLOHEXAOSE
Descriptor: CELLULASE CELC, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose
Authors:Dominguez, R, Alzari, P.M.
Deposit date:1995-12-04
Release date:1996-04-03
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The crystal structure of a family 5 endoglucanase mutant in complexed and uncomplexed forms reveals an induced fit activation mechanism.
J.Mol.Biol., 257, 1996
1CEO
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BU of 1ceo by Molmil
CELLULASE (CELC) MUTANT WITH GLU 140 REPLACED BY GLN
Descriptor: CELLULASE CELC
Authors:Dominguez, R, Alzari, P.M.
Deposit date:1995-12-04
Release date:1996-04-03
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The crystal structure of a family 5 endoglucanase mutant in complexed and uncomplexed forms reveals an induced fit activation mechanism.
J.Mol.Biol., 257, 1996
1BR2
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BU of 1br2 by Molmil
SMOOTH MUSCLE MYOSIN MOTOR DOMAIN COMPLEXED WITH MGADP.ALF4
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, MYOSIN, ...
Authors:Dominguez, R, Trybus, K.M, Cohen, C.
Deposit date:1998-08-26
Release date:1998-09-09
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structure of a vertebrate smooth muscle myosin motor domain and its complex with the essential light chain: visualization of the pre-power stroke state.
Cell(Cambridge,Mass.), 94, 1998

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