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PDB: 167 件
6KP3
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STRUCTURE OF SENDAI VIRUS Y3/ALIX-BRO1 DOMAIN COMPLEX
分子名称: C' protein, Programmed cell death 6-interacting protein
著者Oda, K, Matoba, Y, Sakaguchi, T.
登録日2019-08-14
公開日2020-08-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural Insight into the Interaction of Sendai Virus C Protein with Alix To Stimulate Viral Budding.
J.Virol., 2021
2KFJ
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BU of 2kfj by Molmil
Solution structure of the loop deletion mutant of PB1 domain of Cdc24p
分子名称: Cell division control protein 24
著者Ogura, K, Tandai, T, Yoshinaga, S, Kobashigawa, Y, Kumeta, H, Inagaki, F.
登録日2009-02-22
公開日2009-10-06
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献NMR structure of the heterodimer of Bem1 and Cdc24 PB1 domains from Saccharomyces cerevisiae
J.Biochem., 146, 2009
2LDR
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BU of 2ldr by Molmil
Solution structure of Helix-RING domain of Cbl-b in the Tyr363 phosphorylated form
分子名称: E3 ubiquitin-protein ligase CBL-B, ZINC ION
著者Kumeta, H, Kobashigawa, Y, Inagaki, F.
登録日2011-06-01
公開日2011-12-14
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Autoinhibition and phosphorylation-induced activation mechanisms of human cancer and autoimmune disease-related E3 protein Cbl-b
Proc.Natl.Acad.Sci.USA, 108, 2011
2LHI
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BU of 2lhi by Molmil
Solution structure of Ca2+/CNA1 peptide-bound yCaM
分子名称: CALCIUM ION, Calmodulin,Serine/threonine-protein phosphatase 2B catalytic subunit A1
著者Ogura, K, Takahashi, K, Kobashigawa, Y, Yoshida, R, Itoh, H, Yazawa, M, Inagaki, F.
登録日2011-08-10
公開日2012-08-29
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution structures of yeast Saccharomyces cerevisiae calmodulin in calcium- and target peptide-bound states reveal similarities and differences to vertebrate calmodulin.
Genes Cells, 17, 2012
3FHP
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A neutron crystallographic analysis of a porcine 2Zn insulin at 2.0 A resolution
分子名称: Insulin, ZINC ION
著者Iwai, W, Kurihara, K, Yamada, T, Kobayashi, Y, Ohnishi, Y, Tanaka, I, Takahashi, H, Niimura, N.
登録日2008-12-09
公開日2009-10-20
最終更新日2023-11-01
実験手法NEUTRON DIFFRACTION (2 Å)
主引用文献A neutron crystallographic analysis of T6 porcine insulin at 2.1 A resolution
Acta Crystallogr.,Sect.D, 65, 2009
3B2C
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BU of 3b2c by Molmil
Crystal structure of the collagen triple helix model [{PRO-HYP(R)-GLY}4-{HYP(S)-Pro-GLY}2-{PRO-HYP(R)-GLY}4]3
分子名称: Collagen-like peptide
著者Motooka, D, Kawahara, K, Nakamura, S, Doi, M, Nishi, Y, Nishiuchi, Y, Nakazawa, T, Yoshida, T, Ohkubo, T, Kobayashi, Y, Kang, Y.K, Uchiyama, S.
登録日2011-07-26
公開日2012-04-04
実験手法X-RAY DIFFRACTION (1.36 Å)
主引用文献The triple helical structure and stability of collagen model peptide with 4(S)-hydroxyprolyl-pro-gly units
Biopolymers, 98, 2011
1VA2
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Solution Structure of Transcription Factor Sp1 DNA Binding Domain (Zinc Finger 2)
分子名称: Transcription factor Sp1, ZINC ION
著者Oka, S, Shiraishi, Y, Yoshida, T, Ohkubo, T, Sugiura, Y, Kobayashi, Y.
登録日2004-02-07
公開日2005-02-08
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献NMR structure of transcription factor Sp1 DNA binding domain
Biochemistry, 43, 2004
1VA3
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Solution Structure of Transcription Factor Sp1 DNA Binding Domain (Zinc Finger 3)
分子名称: Transcription factor Sp1, ZINC ION
著者Oka, S, Shiraishi, Y, Yoshida, T, Ohkubo, T, Sugiura, Y, Kobayashi, Y.
登録日2004-02-07
公開日2005-02-08
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献NMR structure of transcription factor Sp1 DNA binding domain
Biochemistry, 43, 2004
1VA1
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Solution Structure of Transcription Factor Sp1 DNA Binding Domain (Zinc Finger 1)
分子名称: Transcription factor Sp1, ZINC ION
著者Oka, S, Shiraishi, Y, Yoshida, T, Ohkubo, T, Sugiura, Y, Kobayashi, Y.
登録日2004-02-07
公開日2005-02-08
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献NMR structure of transcription factor Sp1 DNA binding domain
Biochemistry, 43, 2004
1T7H
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X-ray structure of [Lys(-2)-Arg(-1)-des(17-21)]-endothelin-1 peptide
分子名称: Endothelin-1
著者Hoh, F, Cerdan, R, Kaas, Q, Nishi, Y, Chiche, L, Kubo, S, Chino, N, Kobayashi, Y, Dumas, C, Aumelas, A.
登録日2004-05-10
公開日2004-12-21
最終更新日2017-10-11
実験手法X-RAY DIFFRACTION (1.13 Å)
主引用文献High-resolution X-ray structure of the unexpectedly stable dimer of the [Lys(-2)-Arg(-1)-des(17-21)]endothelin-1 peptide
Biochemistry, 43, 2004
3VQI
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Crystal structure of Kluyveromyces marxianus Atg5
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Atg5, SULFATE ION
著者Yamaguchi, M, Noda, N.N, Yamamoto, H, Shima, T, Kumeta, H, Kobashigawa, Y, Akada, R, Ohsumi, Y, Inagaki, F.
登録日2012-03-24
公開日2012-08-01
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural insights into atg10-mediated formation of the autophagy-essential atg12-atg5 conjugate
Structure, 20, 2012
1QTO
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BU of 1qto by Molmil
1.5 A CRYSTAL STRUCTURE OF A BLEOMYCIN RESISTANCE DETERMINANT FROM BLEOMYCIN-PRODUCING STREPTOMYCES VERTICILLUS
分子名称: BLEOMYCIN-BINDING PROTEIN
著者Kawano, Y, Kumagai, T, Muta, K, Matoba, Y, Davies, J, Sugiyama, M.
登録日1999-06-28
公開日2000-06-28
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献The 1.5 A crystal structure of a bleomycin resistance determinant from bleomycin-producing Streptomyces verticillus.
J.Mol.Biol., 295, 2000
6A3L
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BU of 6a3l by Molmil
Crystal structure of cytochrome c' from Shewanella violacea DSS12
分子名称: Cytochrome c, HEME C
著者Suka, A, Oki, H, Kato, Y, Kawahara, K, Ohkubo, T, Maruno, T, Kobayashi, Y, Fujii, S, Wakai, S, Sambongi, Y.
登録日2018-06-15
公開日2019-06-12
最終更新日2019-10-02
実験手法X-RAY DIFFRACTION (2.14 Å)
主引用文献Stability of cytochromes c' from psychrophilic and piezophilic Shewanella species: implications for complex multiple adaptation to low temperature and high hydrostatic pressure.
Extremophiles, 23, 2019
2KE4
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BU of 2ke4 by Molmil
The NMR structure of the TC10 and Cdc42 interacting domain of CIP4
分子名称: Cdc42-interacting protein 4
著者Kumeta, H, Kanoh, D, Kobashigawa, Y, Inagaki, F.
登録日2009-01-22
公開日2009-03-03
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献The NMR structure of the TC10- and Cdc42-interacting domain of CIP4.
J.Biomol.Nmr, 44, 2009
2KBT
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BU of 2kbt by Molmil
Attachment of an NMR-invisible solubility enhancement tag (INSET) using a sortase-mediated protein ligation method
分子名称: Proto-oncogene vav,Immunoglobulin G-binding protein G
著者Kumeta, H, Kobashigawa, Y, Ogura, K, Inagaki, F.
登録日2008-12-07
公開日2009-02-03
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Attachment of an NMR-invisible solubility enhancement tag using a sortase-mediated protein ligation method
J.Biomol.Nmr, 43, 2009
1IS1
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BU of 1is1 by Molmil
Crystal structure of ribosome recycling factor from Vibrio parahaemolyticus
分子名称: RIBOSOME RECYCLING FACTOR
著者Nakano, H, Yamaichi, Y, Uchiyama, S, Yoshida, T, Nishina, K, Kato, H, Ohkubo, T, Honda, T, Yamagata, Y, Kobayashi, Y.
登録日2001-11-05
公開日2003-06-17
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure and binding mode of a ribosome recycling factor (RRF) from mesophilic bacterium
J.BIOL.CHEM., 278, 2003
2Z6W
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BU of 2z6w by Molmil
Crystal structure of human cyclophilin D in complex with cyclosporin A
分子名称: CITRIC ACID, CYCLOSPORIN A, PEPTIDYL-PROLYL CIS-TRANS ISOMERASE
著者Kajitani, K, Fujihashi, M, Kobayashi, Y, Shimizu, S, Tsujimoto, Y, Miki, K.
登録日2007-08-09
公開日2008-04-29
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (0.96 Å)
主引用文献Crystal Structure of Human Cyclophilin D in Complex with its Inhibitor, Cyclosporin a at 0.96-A Resolution.
Proteins, 70, 2008
2RPV
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BU of 2rpv by Molmil
Solution Structure of GB1 with LBT probe
分子名称: Immunoglobulin G-binding protein G, LANTHANUM (III) ION
著者Saio, T, Ogura, K, Yokochi, M, Kobashigawa, Y, Inagaki, F.
登録日2008-10-28
公開日2009-09-15
最終更新日2021-11-10
実験手法SOLUTION NMR
主引用文献Two-point anchoring of a lanthanide-binding peptide to a target protein enhances the paramagnetic anisotropic effect
J.Biomol.Nmr, 44, 2009
5YQ0
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BU of 5yq0 by Molmil
Crystal structure of secreted protein CofJ from ETEC.
分子名称: CALCIUM ION, CofJ
著者Oki, H, Kawahara, K, Maruno, T, Imai, T, Muroga, Y, Fukakusa, S, Iwashita, T, Kobayashi, Y, Matsuda, S, Kodama, T, Iida, T, Yoshida, T, Ohkubo, T, Nakamura, S.
登録日2017-11-04
公開日2018-06-27
最終更新日2018-07-25
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献Interplay of a secreted protein with type IVb pilus for efficient enterotoxigenicEscherichia colicolonization
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
2ZXY
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BU of 2zxy by Molmil
Crystal Structure of Cytochrome c555 from Aquifex aeolicus
分子名称: Cytochrome c552, HEME C
著者Obuchi, M, Kawahara, K, Motooka, D, Nakamura, S, Yamanaka, M, Takeda, T, Uchiyama, S, Kobayashi, Y, Ohkubo, T, Sambongi, Y.
登録日2009-01-09
公開日2009-08-04
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Hyperstability and crystal structure of cytochrome c(555) from hyperthermophilic Aquifex aeolicus
Acta Crystallogr.,Sect.D, 65, 2009
5YPZ
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BU of 5ypz by Molmil
Crystal structure of minor pilin CofB from CFA/III complexed with N-terminal peptide fragment of CofJ
分子名称: CofB, CofJ
著者Oki, H, Kawahara, K, Maruno, T, Imai, T, Muroga, Y, Fukakusa, S, Iwashita, T, Kobayashi, Y, Matsuda, S, Kodama, T, Iida, T, Yoshida, T, Ohkubo, T, Nakamura, S.
登録日2017-11-04
公開日2018-06-27
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.521 Å)
主引用文献Interplay of a secreted protein with type IVb pilus for efficient enterotoxigenicEscherichia colicolonization.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
1JIE
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BU of 1jie by Molmil
Crystal structure of bleomycin-binding protein from bleomycin-producing Streptomyces verticillus complexed with metal-free bleomycin
分子名称: BLEOMYCIN A2, bleomycin-binding protein
著者Sugiyama, M, Kumagai, T, Hayashida, M, Maruyama, M, Matoba, Y.
登録日2001-07-02
公開日2002-02-06
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The 1.6-A crystal structure of the copper(II)-bound bleomycin complexed with the bleomycin-binding protein from bleomycin-producing Streptomyces verticillus.
J.Biol.Chem., 277, 2002
1JIF
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Crystal structure of bleomycin-binding protein from bleomycin-producing Streptomyces verticillus complexed with copper(II)-bleomycin
分子名称: BLEOMYCIN A2, CHLORIDE ION, COPPER (II) ION, ...
著者Sugiyama, M, Kumagai, T, Hayashida, M, Maruyama, M, Matoba, Y.
登録日2001-07-02
公開日2002-02-06
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献The 1.6-A crystal structure of the copper(II)-bound bleomycin complexed with the bleomycin-binding protein from bleomycin-producing Streptomyces verticillus.
J.Biol.Chem., 277, 2002
3AHA
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Crystal structure of the complex between gp41 fragments N36 and C34 mutant N126K/E137Q
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, Transmembrane protein gp41
著者Izumi, K, Nakamura, S, Nakano, H, Shimura, K, Sakagami, Y, Oishi, S, Uchiyama, S, Ohkubo, T, Kobayashi, Y, Fujii, N, Matsuoka, M, Kodama, E.N.
登録日2010-04-22
公開日2010-05-19
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Characterization of HIV-1 resistance to a fusion inhibitor, N36, derived from the gp41 amino terminal heptad repeat.
Antiviral Res., 2010
1ISE
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Crystal structure of a mutant of ribosome recycling factor from Escherichia coli, Arg132Gly
分子名称: Ribosome Recycling Factor
著者Nakano, H, Yoshida, T, Oka, S, Uchiyama, S, Nishina, K, Ohkubo, T, Kato, H, Yamagata, Y, Kobayashi, Y.
登録日2001-11-30
公開日2003-10-07
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of a mutant of ribosome recycling factor from Escherichia coli, Arg132Gly
To be Published

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件を2024-09-04に公開中

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