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PDB: 7397 results

6TB4
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BU of 6tb4 by Molmil
Structure of SAGA bound to TBP
Descriptor: SAGA-associated factor 73 (Sgf73), Spt20, Subunit (17 kDa) of TFIID and SAGA complexes, ...
Authors:Papai, G, Frechard, A, Kolesnikova, O, Crucifix, C, Schultz, P, Ben-Shem, A.
Deposit date:2019-10-31
Release date:2020-01-29
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structure of SAGA and mechanism of TBP deposition on gene promoters.
Nature, 577, 2020
6TGV
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BU of 6tgv by Molmil
Crystal structure of Mycobacterium smegmatis CoaBC in complex with CTP and FMN
Descriptor: 1,2-ETHANEDIOL, CYTIDINE-5'-TRIPHOSPHATE, Coenzyme A biosynthesis bifunctional protein CoaBC, ...
Authors:Mendes, V, Blaszczyk, M, Bryant, O, Cory-Wright, J, Blundell, T.L.
Deposit date:2019-11-18
Release date:2020-11-25
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Inhibiting Mycobacterium tuberculosis CoaBC by targeting an allosteric site.
Nat Commun, 12, 2021
6UWF
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BU of 6uwf by Molmil
GltPh in complex with L-aspartate and sodium ions in outward-facing state
Descriptor: ASPARTIC ACID, Glutamate transporter homolog, [(2~{R})-1-[2-azanylethoxy(oxidanyl)phosphoryl]oxy-3-hexadecanoyloxy-propan-2-yl] (~{Z})-octadec-9-enoate
Authors:Wang, X, Boudker, O.
Deposit date:2019-11-05
Release date:2020-06-03
Last modified:2020-11-18
Method:ELECTRON MICROSCOPY (3.08 Å)
Cite:Use of paramagnetic 19 F NMR to monitor domain movement in a glutamate transporter homolog.
Nat.Chem.Biol., 16, 2020
1YUO
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BU of 1yuo by Molmil
Optimisation of the surface electrostatics as a strategy for cold adaptation of uracil-DNA N-glycosylase (UNG)from atlantic cod (Gadus morhua)
Descriptor: Uracil-DNA glycosylase
Authors:Moe, E, Leiros, I, Riise, E.K, Olufsen, M, Lanes, O, Smalas, A.O, Willassen, N.P.
Deposit date:2005-02-14
Release date:2005-03-01
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Optimisation of the surface electrostatics as a strategy for cold adaptation of uracil-DNA N-glycosylase (UNG) from Atlantic cod (Gadus morhua)
J.Mol.Biol., 343, 2004
1YNJ
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BU of 1ynj by Molmil
Taq RNA polymerase-Sorangicin complex
Descriptor: DNA-directed RNA polymerase alpha chain, DNA-directed RNA polymerase beta chain, DNA-directed RNA polymerase beta' chain, ...
Authors:Campbell, E.A, Pavlova, O, Zenkin, N, Leon, F, Irschik, H, Jansen, R, Severinov, K, Darst, S.A.
Deposit date:2005-01-24
Release date:2005-03-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural, functional, and genetic analysis of sorangicin inhibition of bacterial RNA polymerase
Embo J., 24, 2005
2IT8
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BU of 2it8 by Molmil
Solution structure of a linear analog of the cyclic squash trypsin inhibitor MCoTI-II
Descriptor: Trypsin inhibitor 2
Authors:Avrutina, O, Chiche, L, Diederichsen, U, Heitz, A, Kolmar, H.
Deposit date:2006-10-19
Release date:2007-10-02
Last modified:2014-04-02
Method:SOLUTION NMR
Cite:Knottin cyclization: Structure and stability of cyclic and linear squash inhibitors do not differ significantly
To be Published
6VBB
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BU of 6vbb by Molmil
2.60 Angstrom Resolution Crystal Structure of Peptidase S41 from Acinetobacter baumannii
Descriptor: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, Peptidase S41, ...
Authors:Minasov, G, Wawrzak, Z, Shuvalova, L, Kiryukhina, O, Dubrovska, I, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2019-12-18
Release date:2019-12-25
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:2.60 Angstrom Resolution Crystal Structure of Peptidase S41 from Acinetobacter baumannii
To Be Published
6UWL
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BU of 6uwl by Molmil
GltPh in complex with L-aspartate and sodium ions in intermediate outward-facing state
Descriptor: ASPARTIC ACID, Glutamate transporter homolog, [(2~{R})-1-[2-azanylethoxy(oxidanyl)phosphoryl]oxy-3-hexadecanoyloxy-propan-2-yl] (~{Z})-octadec-9-enoate
Authors:Wang, X, Boudker, O.
Deposit date:2019-11-05
Release date:2020-04-22
Last modified:2020-11-18
Method:ELECTRON MICROSCOPY (3.62 Å)
Cite:Use of paramagnetic 19 F NMR to monitor domain movement in a glutamate transporter homolog.
Nat.Chem.Biol., 16, 2020
1X6J
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BU of 1x6j by Molmil
Crystal structure of ygfY from Escherichia coli
Descriptor: Hypothetical protein ygfY
Authors:Lim, K, Doseeva, V, Sarikaya Demirkan, E, Pullalarevu, S, Krajewski, W, Galkin, A, Howard, A, Herzberg, O, Structure 2 Function Project (S2F)
Deposit date:2004-08-11
Release date:2005-02-08
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the YgfY from Escherichia coli, a protein that may be involved in transcriptional regulation
Proteins, 58, 2005
1XG3
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BU of 1xg3 by Molmil
Crystal structure of the C123S 2-methylisocitrate lyase mutant from Escherichia coli in complex with the reaction product, Mg(II)-pyruvate and succinate
Descriptor: MAGNESIUM ION, PYRUVIC ACID, Probable methylisocitrate lyase, ...
Authors:Liu, S, Lu, Z, Han, Y, Melamud, E, Dunaway-Mariano, D, Herzberg, O.
Deposit date:2004-09-16
Release date:2005-03-01
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structures of 2-Methylisocitrate Lyase in Complex with Product and with Isocitrate Inhibitor Provide Insight into Lyase Substrate Specificity, Catalysis and Evolution
Biochemistry, 44, 2005
1XFH
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BU of 1xfh by Molmil
Structure of glutamate transporter homolog from Pyrococcus horikoshii
Descriptor: proton glutamate symport protein
Authors:Yernool, D, Boudker, O, Jin, Y, Gouaux, E.
Deposit date:2004-09-14
Release date:2004-10-26
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structure of a glutamate transporter homologue from Pyrococcus horikoshii
Nature, 431, 2004
1XG4
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BU of 1xg4 by Molmil
Crystal Structure of the C123S 2-Methylisocitrate Lyase Mutant from Escherichia coli in complex with the inhibitor isocitrate
Descriptor: ISOCITRIC ACID, MAGNESIUM ION, Probable methylisocitrate lyase
Authors:Liu, S, Lu, Z, Han, Y, Melamud, E, Dunaway-Mariano, D, Herzberg, O.
Deposit date:2004-09-16
Release date:2005-03-01
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal Structures of 2-Methylisocitrate Lyase in Complex with Product and with Isocitrate Inhibitor Provide Insight into Lyase Substrate Specificity, Catalysis and Evolution
Biochemistry, 44, 2005
1XR0
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BU of 1xr0 by Molmil
Structural Basis of SNT PTB Domain Interactions with Distinct Neurotrophic Receptors
Descriptor: Basic fibroblast growth factor receptor 1, FGFR signalling adaptor SNT-1
Authors:Dhalluin, C, Yan, K.S, Plotnikova, O, Lee, K.W, Zeng, L, Kuti, M, Mujtaba, S, Goldfarb, M.P, Zhou, M.-M.
Deposit date:2004-10-13
Release date:2004-11-02
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structural Basis of SNT PTB Domain Interactions with Distinct Neurotrophic Receptors
Mol.Cell, 6, 2000
1XR9
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BU of 1xr9 by Molmil
Crystal Structures of HLA-B*1501 in Complex with Peptides from Human UbcH6 and Epstein-Barr Virus EBNA-3
Descriptor: Beta-2-microglobulin, GLYCEROL, HLA class I histocompatibility antigen, ...
Authors:Roder, G, Blicher, T, Johannessen, B.R, Kristensen, O, Buus, S, Gajhede, M.
Deposit date:2004-10-14
Release date:2005-04-14
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.788 Å)
Cite:Crystal structures of two peptide-HLA-B*1501 complexes; structural characterization of the HLA-B62 supertype
Acta Crystallogr.,Sect.D, 62, 2006
1XTI
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BU of 1xti by Molmil
Structure of Wildtype human UAP56
Descriptor: ISOPROPYL ALCOHOL, Probable ATP-dependent RNA helicase p47
Authors:Shi, H, Cordin, O, Minder, C.M, Linder, P, Xu, R.M.
Deposit date:2004-10-21
Release date:2004-12-14
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of the human ATP-dependent splicing and export factor UAP56
Proc.Natl.Acad.Sci.Usa, 101, 2004
6SPT
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BU of 6spt by Molmil
High resolution crystal structure of N-terminal domain of PEX14 from Trypanosoma brucei in complex with the fist compound with sub-micromolar trypanocidal activity
Descriptor: 5-[(4-methoxynaphthalen-1-yl)methyl]-1-[2-[(2-methyl-1-oxidanyl-propan-2-yl)amino]ethyl]-~{N}-(naphthalen-1-ylmethyl)-6,7-dihydro-4~{H}-pyrazolo[4,3-c]pyridine-3-carboxamide, BETA-MERCAPTOETHANOL, CHLORIDE ION, ...
Authors:Napolitano, V, Dawidowski, M, Kalel, V.C, Fino, R, Emmanouilidis, L, Lenhart, D, Ostertag, M, Kaiser, M, Kolonko, M, Schilebs, W, Maser, P, Tetko, I, Hadian, K, Plettenburg, O, Erdmann, R, Sattler, M, Popowicz, G.M, Dubin, G.
Deposit date:2019-09-02
Release date:2020-01-01
Last modified:2020-02-05
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structure-Activity Relationship in Pyrazolo[4,3-c]pyridines, First Inhibitors of PEX14-PEX5 Protein-Protein Interaction with Trypanocidal Activity.
J.Med.Chem., 63, 2020
6SUP
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BU of 6sup by Molmil
Crystal Structure of TcdB2-TccC3-Cdc42
Descriptor: MAGNESIUM ION, TcdB2,TccC3,Cell division control protein 42 homolog
Authors:Roderer, D, Schubert, E, Sitsel, O, Raunser, S.
Deposit date:2019-09-16
Release date:2019-12-04
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Towards the application of Tc toxins as a universal protein translocation system.
Nat Commun, 10, 2019
1XNI
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BU of 1xni by Molmil
Tandem Tudor Domain of 53BP1
Descriptor: Tumor suppressor p53-binding protein 1
Authors:Huyen, Y, Zgheib, O, DiTullio Jr, R.A, Gorgoulis, V.G, Zacharatos, P, Petty, T.J, Sheston, E.A, Mellert, H.S, Stavridi, E.S, Halazonetis, T.D.
Deposit date:2004-10-05
Release date:2004-11-30
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Methylated lysine 79 of histone H3 targets 53BP1 to DNA double-strand breaks
Nature, 432, 2004
6SUQ
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BU of 6suq by Molmil
Crystal Structure of TcdB2-TccC3-TEV
Descriptor: TcdB2,TccC3,Genome polyprotein
Authors:Roderer, D, Schubert, E, Sitsel, O, Raunser, S.
Deposit date:2019-09-16
Release date:2019-12-04
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:Towards the application of Tc toxins as a universal protein translocation system.
Nat Commun, 10, 2019
1Y8F
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BU of 1y8f by Molmil
Solution structure of the munc13-1 C1-domain
Descriptor: Unc-13 homolog A, ZINC ION
Authors:Shen, N, Guryev, O, Rizo, J.
Deposit date:2004-12-12
Release date:2005-04-12
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Intramolecular occlusion of the diacylglycerol-binding site in the C1 domain of munc13-1.
Biochemistry, 44, 2005
6V8G
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BU of 6v8g by Molmil
GltPh mutant - Y204L A345V V366A
Descriptor: ASPARTIC ACID, Glutamate transporter homolog, SODIUM ION
Authors:Boudker, O, Huysmans, G.H.M.
Deposit date:2019-12-11
Release date:2020-11-18
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.38 Å)
Cite:The high-energy transition state of the glutamate transporter homologue GltPh.
Embo J., 40, 2021
2W5Q
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BU of 2w5q by Molmil
Structure-based mechanism of lipoteichoic acid synthesis by Staphylococcus aureus LtaS.
Descriptor: 1,2-ETHANEDIOL, MANGANESE (II) ION, PROCESSED GLYCEROL PHOSPHATE LIPOTEICHOIC ACID SYNTHASE
Authors:Lu, D, Wormann, M.E, Zhang, X, Scheewind, O, Grundling, A, Freemont, P.S.
Deposit date:2008-12-11
Release date:2009-02-03
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structure-Based Mechanism of Lipoteichoic Acid Synthesis by Staphylococcus Aureus Ltas.
Proc.Natl.Acad.Sci.USA, 106, 2009
1Y53
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BU of 1y53 by Molmil
Crystal structure of bacterial expressed avidin related protein 4 (AVR4) C122S
Descriptor: Avidin-related protein 4/5, FORMIC ACID
Authors:Eisenberg-Domovich, Y, Hytonen, V.P, Wilchek, M, Bayer, E.A, Kulomaa, M.S, Livnah, O.
Deposit date:2004-12-02
Release date:2005-05-24
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:High-resolution crystal structure of an avidin-related protein: insight into high-affinity biotin binding and protein stability.
Acta Crystallogr.,Sect.D, 61, 2005
1YI3
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BU of 1yi3 by Molmil
Crystal Structure of Pim-1 bound to LY294002
Descriptor: 2-MORPHOLIN-4-YL-7-PHENYL-4H-CHROMEN-4-ONE, Proto-oncogene serine/threonine-protein kinase Pim-1
Authors:Jacobs, M.D, Black, J, Futer, O, Swenson, L, Hare, B, Fleming, M, Saxena, K.
Deposit date:2005-01-11
Release date:2005-01-25
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Pim-1 ligand-bound structures reveal the mechanism of serine/threonine kinase inhibition by LY294002.
J.Biol.Chem., 280, 2005
6VBF
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BU of 6vbf by Molmil
1.85 Angstrom Resolution Crystal Structure of N-terminal Domain of Two-component System Response Regulator from Acinetobacter baumannii
Descriptor: CALCIUM ION, CHLORIDE ION, Two-component regulatory system response regulator
Authors:Minasov, G, Shuvalova, L, Kiryukhina, O, Wiersum, G, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2019-12-18
Release date:2019-12-25
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:1.85 Angstrom Resolution Crystal Structure of N-terminal Domain of Two-component System Response Regulator from Acinetobacter baumannii
To Be Published

223532

數據於2024-08-07公開中

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