Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 7397 件

4S13
DownloadVisualize
BU of 4s13 by Molmil
Ferulic Acid Decarboxylase (FDC1)
分子名称: 4-ethenylphenol, Ferulic acid decarboxylase 1
著者Lee, S.G, Bhuiya, M.W, Yu, O, Jez, J.M.
登録日2015-01-07
公開日2015-05-06
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.348 Å)
主引用文献Structure and Mechanism of Ferulic Acid Decarboxylase (FDC1) from Saccharomyces cerevisiae.
Appl.Environ.Microbiol., 81, 2015
1R7A
DownloadVisualize
BU of 1r7a by Molmil
Sucrose Phosphorylase from Bifidobacterium adolescentis
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, sucrose phosphorylase
著者Sprogoe, D, van den Broek, L.A.M, Mirza, O, Kastrup, J.S, Voragen, A.G.J, Gajhede, M, Skov, L.K.
登録日2003-10-21
公開日2004-02-10
最終更新日2014-11-19
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Crystal structure of sucrose phosphorylase from Bifidobacterium adolescentis.
Biochemistry, 43, 2004
4TKU
DownloadVisualize
BU of 4tku by Molmil
Reactivated Nitrogenase MoFe-protein from A. vinelandii
分子名称: 3-HYDROXY-3-CARBOXY-ADIPIC ACID, CHLORIDE ION, FE (II) ION, ...
著者Spatzal, T, Perez, K, Einsle, O, Howard, J.B, Rees, D.C.
登録日2014-05-27
公開日2014-10-01
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.43 Å)
主引用文献Ligand binding to the FeMo-cofactor: structures of CO-bound and reactivated nitrogenase.
Science, 345, 2014
7QA1
DownloadVisualize
BU of 7qa1 by Molmil
The structure of natural crystals of the Lysinibacillus sphaericus Tpp49Aa1 pesticidal protein elucidated using serial femtosecond crystallography at an X-ray free electron laser
分子名称: Toxin-10 pesticidal protein (Tpp) 49Aa1
著者Williamson, L.J, Rizkallah, P.J, Berry, C, Oberthur, D, Galchenkova, M, Yefanov, O, Bean, R, Best, H.L.
登録日2021-11-15
公開日2023-05-17
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure of the Lysinibacillus sphaericus Tpp49Aa1 pesticidal protein elucidated from natural crystals using MHz-SFX.
Proc.Natl.Acad.Sci.USA, 120, 2023
7QS6
DownloadVisualize
BU of 7qs6 by Molmil
Solution structure of thanatin-like derivative 7 in complex with E.coli LptA
分子名称: Lipopolysaccharide export system protein LptA, Thanatin-like derivative
著者Moehle, K, Zerbe, O.
登録日2022-01-12
公開日2023-05-10
最終更新日2023-11-15
実験手法SOLUTION NMR
主引用文献Peptidomimetic antibiotics disrupt the lipopolysaccharide transport bridge of drug-resistant Enterobacteriaceae.
Sci Adv, 9, 2023
7RNT
DownloadVisualize
BU of 7rnt by Molmil
CRYSTAL STRUCTURE OF THE TYR45TRP MUTANT OF RIBONUCLEASE T1 IN A COMPLEX WITH 2'-ADENYLIC ACID
分子名称: ADENOSINE-2'-MONOPHOSPHATE, CALCIUM ION, RIBONUCLEASE T1
著者Koellner, G, Grunert, H.-P, Landt, O, Saenger, W.
登録日1991-08-20
公開日1993-01-15
最終更新日2017-11-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of the Tyr45Trp mutant of ribonuclease T1 in a complex with 2'-adenylic acid.
Eur.J.Biochem., 201, 1991
4TKV
DownloadVisualize
BU of 4tkv by Molmil
CO-bound Nitrogenase MoFe-protein from A. vinelandii
分子名称: 3-HYDROXY-3-CARBOXY-ADIPIC ACID, CARBON MONOXIDE, FE (II) ION, ...
著者Spatzal, T, Perez, K, Einsle, O, Howard, J.B, Rees, D.C.
登録日2014-05-28
公開日2014-10-01
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Ligand binding to the FeMo-cofactor: structures of CO-bound and reactivated nitrogenase.
Science, 345, 2014
1RGL
DownloadVisualize
BU of 1rgl by Molmil
RNASE T1 MUTANT GLU46GLN BINDS THE INHIBITORS 2'GMP AND 2'AMP AT THE 3' SUBSITE
分子名称: CALCIUM ION, GUANOSINE-2'-MONOPHOSPHATE, RIBONUCLEASE T1
著者Granzin, J, Puras-Lutzke, R, Landt, O, Grunert, H.-P, Heinemann, U, Saenger, W, Hahn, U.
登録日1992-02-19
公開日1993-01-15
最終更新日2017-11-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献RNase T1 mutant Glu46Gln binds the inhibitors 2'GMP and 2'AMP at the 3' subsite.
J.Mol.Biol., 225, 1992
7RJJ
DownloadVisualize
BU of 7rjj by Molmil
Crystal Structure of the Peptidoglycan Binding Domain of the Outer Membrane Protein (OmpA) from Klebsiella pneumoniae with bound D-alanine
分子名称: CHLORIDE ION, D-ALANINE, OmpA family protein
著者Minasov, G, Shuvalova, L, Kiryukhina, O, Dubrovska, I, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2021-07-21
公開日2021-07-28
最終更新日2023-06-14
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献A Structural Systems Biology Approach to High-Risk CG23 Klebsiella pneumoniae.
Microbiol Resour Announc, 12, 2023
4RMI
DownloadVisualize
BU of 4rmi by Molmil
Human Sirt2 in complex with SirReal1 and Ac-Lys-OTC peptide
分子名称: Ac-Lys-OTC peptide, N-(5-benzyl-1,3-thiazol-2-yl)-2-[(4,6-dimethylpyrimidin-2-yl)sulfanyl]acetamide, NAD-dependent protein deacetylase sirtuin-2, ...
著者Rumpf, T, Schiedel, M, Karaman, B, Roessler, C, North, B.J, Lehotzky, A, Olah, J, Ladwein, K.I, Schmidtkunz, K, Gajer, M, Pannek, M, Steegborn, C, Sinclair, D.A, Gerhardt, S, Ovadi, J, Schutkowski, M, Sippl, W, Einsle, O, Jung, M.
登録日2014-10-21
公開日2015-02-25
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Selective Sirt2 inhibition by ligand-induced rearrangement of the active site.
Nat Commun, 6, 2015
1RGK
DownloadVisualize
BU of 1rgk by Molmil
RNASE T1 MUTANT GLU46GLN BINDS THE INHIBITORS 2'GMP AND 2'AMP AT THE 3' SUBSITE
分子名称: ADENOSINE-2'-MONOPHOSPHATE, CALCIUM ION, RIBONUCLEASE T1
著者Granzin, J, Puras-Lutzke, R, Landt, O, Grunert, H.-P, Heinemann, U, Saenger, W, Hahn, U.
登録日1992-02-19
公開日1993-01-15
最終更新日2017-11-29
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献RNase T1 mutant Glu46Gln binds the inhibitors 2'GMP and 2'AMP at the 3' subsite.
J.Mol.Biol., 225, 1992
1R4D
DownloadVisualize
BU of 1r4d by Molmil
Solution structure of the chimeric L/D DNA oligonucleotide d(C8metGCGC(L)G(L)CGCG)2
分子名称: 5'-D(*CP*(8MG)P*CP*GP*(0DC)P*(0DG)P*CP*GP*CP*G)-3'
著者Cherrak, I, Mauffret, O, Santamaria, F, Rayner, B, Hocquet, A, Ghomi, M, Fermandjian, S.
登録日2003-10-06
公開日2003-10-21
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献L-nucleotides and 8-methylguanine of d(C1m8G2C3G4C5LG6LC7G8C9G10)2 act cooperatively to promote a left-handed helix under physiological salt conditions.
Nucleic Acids Res., 31, 2003
4RPC
DownloadVisualize
BU of 4rpc by Molmil
Crystal structure of the putative alpha/beta hydrolase family protein from Desulfitobacterium hafniense
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, TETRAETHYLENE GLYCOL, putative alpha/beta hydrolase
著者Filippova, E.V, Wawrzak, Z, Minasov, G, Kiryukhina, O, Endres, M, Joachimiak, A, Anderson, W.F, Midwest Center for Structural Genomics (MCSG)
登録日2014-10-30
公開日2014-11-12
最終更新日2018-01-24
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of the putative alpha/beta hydrolase family protein from Desulfitobacterium hafniense
To be Published
1RU3
DownloadVisualize
BU of 1ru3 by Molmil
Crystal Structure of the monomeric acetyl-CoA synthase from Carboxydothermus hydrogenoformans
分子名称: Acetyl-CoA synthase, GLYCEROL, IRON/SULFUR CLUSTER, ...
著者Svetlitchnyi, V, Dobbek, H, Meyer-Klaucke, W, Meins, T, Thiele, B, Rmer, P, Huber, R, Meyer, O.
登録日2003-12-11
公開日2003-12-23
最終更新日2019-11-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献A functional Ni-Ni-[4Fe-4S] cluster in the monomeric acetyl-CoA synthase from Carboxydothermus hydrogenoformans
Proc.Natl.Acad.Sci.USA, 101, 2004
4S31
DownloadVisualize
BU of 4s31 by Molmil
Crystal structure of mitogen-activated protein kinase 1 wtERK2 at 1.45A
分子名称: Mitogen-activated protein kinase 1
著者Livnah, O, Karamansha, Y.
登録日2015-01-26
公開日2016-01-27
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Multiple mechanisms render Erk proteins MEK-independent
To be Published
1R8G
DownloadVisualize
BU of 1r8g by Molmil
Structure and function of YbdK
分子名称: Hypothetical protein ybdK
著者Lehmann, C, Doseeva, V, Pullalarevu, S, Krajewski, W, Howard, A, Herzberg, O, Structure 2 Function Project (S2F)
登録日2003-10-24
公開日2004-08-17
最終更新日2021-07-28
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献YbdK is a carboxylate-amine ligase with a gamma-glutamyl:Cysteine ligase activity: crystal structure and enzymatic assays
PROTEINS: STRUCT.,FUNCT.,GENET., 56, 2004
1RLW
DownloadVisualize
BU of 1rlw by Molmil
CALCIUM-PHOSPHOLIPID BINDING DOMAIN FROM CYTOSOLIC PHOSPHOLIPASE A2
分子名称: CADMIUM ION, CALCIUM ION, PHOSPHOLIPASE A2
著者Perisic, O, Williams, R.L.
登録日1997-10-28
公開日1998-02-25
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of a calcium-phospholipid binding domain from cytosolic phospholipase A2.
J.Biol.Chem., 273, 1998
1RFR
DownloadVisualize
BU of 1rfr by Molmil
NMR structure of the 30mer stemloop-D of coxsackieviral RNA
分子名称: stemloop-D RNA of the 5'-cloverleaf of coxsackievirus B3
著者Ohlenschlager, O, Wohnert, J, Bucci, E, Seitz, S, Hafner, S, Ramachandran, R, Zell, R, Gorlach, M.
登録日2003-11-10
公開日2004-03-23
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献The structure of the stemloop D subdomain of coxsackievirus B3 cloverleaf RNA and its interaction with the proteinase 3C.
STRUCTURE, 12, 2004
7RB6
DownloadVisualize
BU of 7rb6 by Molmil
Low temperature structure of hAChE in complex with substrate analog 4K-TMA
分子名称: 4,4-DIHYDROXY-N,N,N-TRIMETHYLPENTAN-1-AMINIUM, Acetylcholinesterase, GLYCEROL, ...
著者Kovalevsky, A, Gerlits, O, Radic, Z.
登録日2021-07-05
公開日2021-09-22
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Room temperature crystallography of human acetylcholinesterase bound to a substrate analogue 4K-TMA: Towards a neutron structure
Curr Res Struct Biol, 3, 2021
7RB7
DownloadVisualize
BU of 7rb7 by Molmil
Room temperature structure of hAChE in complex with substrate analog 4K-TMA and MMB4 oxime
分子名称: 1,1'-methylenebis{4-[(E)-(hydroxyimino)methyl]pyridin-1-ium}, 4,4-DIHYDROXY-N,N,N-TRIMETHYLPENTAN-1-AMINIUM, Acetylcholinesterase
著者Kovalevsky, A, Gerlits, O, Radic, Z.
登録日2021-07-05
公開日2021-09-22
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Room temperature crystallography of human acetylcholinesterase bound to a substrate analogue 4K-TMA: Towards a neutron structure
Curr Res Struct Biol, 3, 2021
7RB5
DownloadVisualize
BU of 7rb5 by Molmil
Room temperature structure of hAChE in complex with substrate analog 4K-TMA
分子名称: 4,4-DIHYDROXY-N,N,N-TRIMETHYLPENTAN-1-AMINIUM, Acetylcholinesterase
著者Kovalevsky, A, Gerlits, O, Radic, Z.
登録日2021-07-05
公開日2021-09-22
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Room temperature crystallography of human acetylcholinesterase bound to a substrate analogue 4K-TMA: Towards a neutron structure
Curr Res Struct Biol, 3, 2021
4RMJ
DownloadVisualize
BU of 4rmj by Molmil
Human Sirt2 in complex with ADP ribose and nicotinamide
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, NAD-dependent protein deacetylase sirtuin-2, ...
著者Rumpf, T, Schiedel, M, Karaman, B, Roessler, C, North, B.J, Lehotzky, A, Olah, J, Ladwein, K.I, Schmidtkunz, K, Gajer, M, Pannek, M, Steegborn, C, Sinclair, D.A, Gerhardt, S, Ovadi, J, Schutkowski, M, Sippl, W, Einsle, O, Jung, M.
登録日2014-10-21
公開日2015-02-25
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Selective Sirt2 inhibition by ligand-induced rearrangement of the active site.
Nat Commun, 6, 2015
4RSH
DownloadVisualize
BU of 4rsh by Molmil
Structure of a putative lipolytic protein of G-D-S-L family from Desulfitobacterium hafniense DCB-2
分子名称: CHLORIDE ION, Lipolytic protein G-D-S-L family
著者Filippova, E.V, Wawrzak, Z, Minasov, G, Kiryukhina, O, Endres, M, Joachimiak, A, Anderson, W.F, Midwest Center for Structural Genomics (MCSG)
登録日2014-11-07
公開日2014-11-19
最終更新日2017-11-22
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献Structure of a putative lipolytic protein of G-D-S-L family from Desulfitobacterium hafniense DCB-2
To be Published
4RMH
DownloadVisualize
BU of 4rmh by Molmil
Human Sirt2 in complex with SirReal2 and Ac-Lys-H3 peptide
分子名称: 2-[(4,6-dimethylpyrimidin-2-yl)sulfanyl]-N-[5-(naphthalen-1-ylmethyl)-1,3-thiazol-2-yl]acetamide, Ac-Lys-H3 peptide, NAD-dependent protein deacetylase sirtuin-2, ...
著者Rumpf, T, Schiedel, M, Karaman, B, Roessler, C, North, B.J, Lehotzky, A, Olah, J, Ladwein, K.I, Schmidtkunz, K, Gajer, M, Pannek, M, Steegborn, C, Sinclair, D.A, Gerhardt, S, Ovadi, J, Schutkowski, M, Sippl, W, Einsle, O, Jung, M.
登録日2014-10-21
公開日2015-02-25
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.42 Å)
主引用文献Selective Sirt2 inhibition by ligand-induced rearrangement of the active site.
Nat Commun, 6, 2015
7RDJ
DownloadVisualize
BU of 7rdj by Molmil
Crystal structure of PCDN-16B, an anti-HIV antibody from the PCDN bnAb lineage (non-cysteinylated state)
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, PCDN-16B Fab heavy chain, ...
著者Omorodion, O, Wilson, I.A.
登録日2021-07-09
公開日2021-11-10
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Structural and Biochemical Characterization of Cysteinylation in Broadly Neutralizing Antibodies to HIV-1.
J.Mol.Biol., 433, 2021

223532

件を2024-08-07に公開中

PDB statisticsPDBj update infoContact PDBjnumon