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PDB: 7397 results

7TJK
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S. cerevisiae ORC bound to 84 bp ARS1 DNA and Cdc6 (state 2) with docked Orc6 N-terminal domain
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Cell division control protein 6, DNA, ...
Authors:Schmidt, J.M, Yang, R, Kumar, A, Hunker, O, Bleichert, F.
Deposit date:2022-01-16
Release date:2022-10-05
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:A mechanism of origin licensing control through autoinhibition of S. cerevisiae ORC·DNA·Cdc6.
Nat Commun, 13, 2022
7TJJ
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S. cerevisiae ORC bound to 84 bp ARS1 DNA and Cdc6 (state 1) with docked Orc6 N-terminal domain
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Cell division control protein 6, DNA, ...
Authors:Schmidt, J.M, Yang, R, Kumar, A, Hunker, O, Bleichert, F.
Deposit date:2022-01-16
Release date:2022-10-05
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:A mechanism of origin licensing control through autoinhibition of S. cerevisiae ORC·DNA·Cdc6.
Nat Commun, 13, 2022
6WJT
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BU of 6wjt by Molmil
2.0 Angstrom Resolution Crystal Structure of Nsp16-Nsp10 Heterodimer from SARS-CoV-2 in Complex with S-Adenosyl-L-Homocysteine
Descriptor: 2'-O-methyltransferase, FORMIC ACID, Non-structural protein 10, ...
Authors:Minasov, G, Shuvalova, L, Rosas-Lemus, M, Kiryukhina, O, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2020-04-14
Release date:2020-04-22
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2 Å)
Cite:High-resolution structures of the SARS-CoV-2 2'- O -methyltransferase reveal strategies for structure-based inhibitor design.
Sci.Signal., 13, 2020
6XWY
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Highly pH-resistant long stokes-shift, red fluorescent protein mCRISPRed
Descriptor: 1,2-ETHANEDIOL, MALONIC ACID, Red fluorescent protein eqFP611
Authors:Erdogan, M, Fabritius, A, Basquin, J, Griesbeck, O.
Deposit date:2020-01-24
Release date:2020-02-05
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Targeted In Situ Protein Diversification and Intra-organelle Validation in Mammalian Cells.
Cell Chem Biol, 27, 2020
7URT
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BU of 7urt by Molmil
T=1 particle HIV-1 CA G60A/G61P/M66A
Descriptor: Gag polyprotein, INOSITOL HEXAKISPHOSPHATE
Authors:Pornillos, O, Ganser-Pornillos, B.K, Schirra, R.T.
Deposit date:2022-04-22
Release date:2023-02-15
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (2.39 Å)
Cite:A molecular switch modulates assembly and host factor binding of the HIV-1 capsid.
Nat.Struct.Mol.Biol., 30, 2023
7URN
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Structure of HIV-1 capsid declination
Descriptor: HIV-1 capsid protein, INOSITOL HEXAKISPHOSPHATE
Authors:Pornillos, O, Ganser-Pornillos, B.K, Schirra, R.T.
Deposit date:2022-04-22
Release date:2023-02-15
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.43 Å)
Cite:A molecular switch modulates assembly and host factor binding of the HIV-1 capsid.
Nat.Struct.Mol.Biol., 30, 2023
6L1B
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BU of 6l1b by Molmil
Crystal Structure of P450BM3 with N-(3-cyclopentylpropanoyl)-L-pipecolyl-L-phenylalanine
Descriptor: (2S)-2-[[(2S)-1-(3-cyclopentylpropanoyl)piperidin-2-yl]carbonylamino]-3-phenyl-propanoic acid, Bifunctional cytochrome P450/NADPH--P450 reductase, DIMETHYL SULFOXIDE, ...
Authors:Shoji, O, Yonemura, K.
Deposit date:2019-09-28
Release date:2020-09-30
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Systematic Evolution of Decoy Molecules for the Highly Efficient Hydroxylation of Benzene and Small Alkanes Catalyzed by Wild-Type Cytochrome P450BM3
Acs Catalysis, 10, 2020
8EET
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BU of 8eet by Molmil
T=1 particle HIV-1 CA M66A
Descriptor: Gag polyprotein, INOSITOL HEXAKISPHOSPHATE
Authors:Pornillos, O, Ganser-Pornillos, B.K, Schirra, R.T.
Deposit date:2022-09-07
Release date:2023-02-15
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:A molecular switch modulates assembly and host factor binding of the HIV-1 capsid.
Nat.Struct.Mol.Biol., 30, 2023
8EEP
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T=1 particle HIV-1 CA G60A/G61P
Descriptor: Gag polyprotein, INOSITOL HEXAKISPHOSPHATE
Authors:Pornillos, O, Ganser-Pornillos, B.K, Schirra, R.T.
Deposit date:2022-09-07
Release date:2023-02-15
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (2.2 Å)
Cite:A molecular switch modulates assembly and host factor binding of the HIV-1 capsid.
Nat.Struct.Mol.Biol., 30, 2023
6L1Q
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Crystal structure of AfCbbQ2, a MoxR AAA+-ATPase and CbbQO-type Rubisco activase from Acidithiobacillus ferrooxidans
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CbbQ protein, PHOSPHATE ION
Authors:Ye, F.Z, Tsai, Y.C.C, Mueller-Cajar, O, Gao, Y.G.
Deposit date:2019-09-30
Release date:2019-12-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Insights into the mechanism and regulation of the CbbQO-type Rubisco activase, a MoxR AAA+ ATPase.
Proc.Natl.Acad.Sci.USA, 117, 2020
6WN5
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1.52 Angstrom Resolution Crystal Structure of Transcriptional Regulator HdfR from Klebsiella pneumoniae
Descriptor: CHLORIDE ION, Transcriptional regulator HdfR
Authors:Minasov, G, Shuvalova, L, Kiryukhina, O, Dubrovska, I, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2020-04-22
Release date:2020-05-06
Last modified:2023-06-14
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:A Structural Systems Biology Approach to High-Risk CG23 Klebsiella pneumoniae.
Microbiol Resour Announc, 12, 2023
6WN8
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2.70 Angstrom Resolution Crystal Structure of Uracil Phosphoribosyl Transferase from Klebsiella pneumoniae
Descriptor: CHLORIDE ION, SULFATE ION, Uracil phosphoribosyltransferase, ...
Authors:Minasov, G, Shuvalova, L, Kiryukhina, O, Dubrovska, I, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2020-04-22
Release date:2020-05-06
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:A Structural Systems Biology Approach to High-Risk CG23 Klebsiella pneumoniae.
Microbiol Resour Announc, 12, 2023
8QYA
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BU of 8qya by Molmil
J22.9-FNY, fully humanized, CDR optimized Fab Fragment based on chimeric J22.9-xi IgG against BCMA; with VH CDR2 glycosylation
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, COPPER (II) ION, Chains: A, ...
Authors:Marino, S.F, Daumke, O.
Deposit date:2023-10-25
Release date:2024-01-17
Method:X-RAY DIFFRACTION (2.72 Å)
Cite:Structure-based humanization of a therapeutic antibody for Multiple Myeloma
To Be Published
7UG0
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BU of 7ug0 by Molmil
TBOA-bound GltPh RSMR mutant in IFS state
Descriptor: (3S)-3-(BENZYLOXY)-L-ASPARTIC ACID, Glutamate transporter homolog, SODIUM ION
Authors:Huang, Y, Boudker, O.
Deposit date:2022-03-23
Release date:2023-03-29
Last modified:2023-05-10
Method:ELECTRON MICROSCOPY (2.55 Å)
Cite:Environmentally Ultrasensitive Fluorine Probe to Resolve Protein Conformational Ensembles by 19F NMR and Cryo-EM
J.Am.Chem.Soc., 145, 2023
7UGX
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BU of 7ugx by Molmil
Asp-bound GltPh RSMR mutant in IFS-B1 state
Descriptor: ASPARTIC ACID, Glutamate transporter homolog, SODIUM ION
Authors:Huang, Y, Boudker, O.
Deposit date:2022-03-25
Release date:2023-03-29
Last modified:2023-05-10
Method:ELECTRON MICROSCOPY (2.96 Å)
Cite:Environmentally Ultrasensitive Fluorine Probe to Resolve Protein Conformational Ensembles by 19 F NMR and Cryo-EM.
J.Am.Chem.Soc., 145, 2023
7UH6
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BU of 7uh6 by Molmil
Asp-bound GltPh RSMR mutant in IFS-B2 state
Descriptor: ASPARTIC ACID, Glutamate transporter homolog, SODIUM ION
Authors:Huang, Y, Boudker, O.
Deposit date:2022-03-25
Release date:2023-03-29
Last modified:2023-05-10
Method:ELECTRON MICROSCOPY (3.44 Å)
Cite:Environmentally Ultrasensitive Fluorine Probe to Resolve Protein Conformational Ensembles by 19F NMR and Cryo-EM
J.Am.Chem.Soc., 145, 2023
7UGJ
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BU of 7ugj by Molmil
TBOA-bound GltPh RSMR mutant in OFS state
Descriptor: (3S)-3-(BENZYLOXY)-L-ASPARTIC ACID, Glutamate transporter homolog, SODIUM ION
Authors:Huang, Y, Boudker, O.
Deposit date:2022-03-24
Release date:2023-03-29
Last modified:2023-05-10
Method:ELECTRON MICROSCOPY (2.81 Å)
Cite:Environmentally Ultrasensitive Fluorine Probe to Resolve Protein Conformational Ensembles by 19F NMR and Cryo-EM
J.Am.Chem.Soc., 145, 2023
7UGV
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BU of 7ugv by Molmil
Asp-bound GltPh RSMR mutant in IFS-A2 state
Descriptor: ASPARTIC ACID, Glutamate transporter homolog, SODIUM ION
Authors:Huang, Y, Boudker, O.
Deposit date:2022-03-25
Release date:2023-03-29
Last modified:2023-05-10
Method:ELECTRON MICROSCOPY (2.94 Å)
Cite:Environmentally Ultrasensitive Fluorine Probe to Resolve Protein Conformational Ensembles by 19 F NMR and Cryo-EM.
J.Am.Chem.Soc., 145, 2023
6LBW
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BU of 6lbw by Molmil
Crystal structure of Ag-mediated base pairs in uncanonical DNA duplex
Descriptor: DNA (5'-D(*CP*GP*(CBR)P*GP*AP*(LCC)P*TP*CP*GP*CP*G)-3'), SILVER ION
Authors:Aoyama, H, Obika, S, Nakagawa, O.
Deposit date:2019-11-15
Release date:2020-11-18
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.501 Å)
Cite:Crystallographic Structure of Novel Types of Ag I -Mediated Base Pairs in Non-canonical DNA Duplex Containing 2'-O,4'-C-Methylene Bridged Nucleic Acids.
Chemistry, 27, 2021
7UH3
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BU of 7uh3 by Molmil
Asp-bound GltPh RSMR mutant in iOFS state
Descriptor: ASPARTIC ACID, Glutamate transporter homolog, SODIUM ION
Authors:Huang, Y, Boudker, O.
Deposit date:2022-03-25
Release date:2023-03-29
Last modified:2023-05-10
Method:ELECTRON MICROSCOPY (2.99 Å)
Cite:Environmentally Ultrasensitive Fluorine Probe to Resolve Protein Conformational Ensembles by 19F NMR and Cryo-EM
J.Am.Chem.Soc., 145, 2023
6XWJ
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BU of 6xwj by Molmil
Constitutive decay element CDE2 from human 3'UTR
Descriptor: RNA (5'-R(*GP*GP*UP*GP*CP*CP*UP*AP*AP*UP*AP*UP*UP*UP*AP*GP*GP*CP*AP*CP*C)-3')
Authors:Schwalbe, H, Binas, O.
Deposit date:2020-01-23
Release date:2020-05-27
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural basis for the recognition of transiently structured AU-rich elements by Roquin.
Nucleic Acids Res., 48, 2020
7UGD
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BU of 7ugd by Molmil
Asp-bound GltPh RSMR mutant in IFS-A1 state
Descriptor: ASPARTIC ACID, Glutamate transporter homolog, SODIUM ION
Authors:Huang, Y, Boudker, O.
Deposit date:2022-03-24
Release date:2023-03-29
Last modified:2023-05-10
Method:ELECTRON MICROSCOPY (2.95 Å)
Cite:Environmentally Ultrasensitive Fluorine Probe to Resolve Protein Conformational Ensembles by 19F NMR and Cryo-EM
J.Am.Chem.Soc., 145, 2023
8DUJ
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BU of 8duj by Molmil
Global map in C1 of RyR1 particles in complex with ImperaCalcin
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CAFFEINE, CALCIUM ION, ...
Authors:Haji-Ghassemi, O, Van Petegm, F.
Deposit date:2022-07-27
Release date:2023-05-31
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Cryo-EM analysis of scorpion toxin binding to Ryanodine Receptors reveals subconductance that is abolished by PKA phosphorylation.
Sci Adv, 9, 2023
8DRP
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BU of 8drp by Molmil
Focus/local refined map in C4 of signal subtracted RyR1 particles
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CAFFEINE, Ryanodine receptor 1, ...
Authors:Haji-Ghassemi, O, Van Petegm, F.
Deposit date:2022-07-21
Release date:2023-05-31
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (2.84 Å)
Cite:Cryo-EM analysis of scorpion toxin binding to Ryanodine Receptors reveals subconductance that is abolished by PKA phosphorylation.
Sci Adv, 9, 2023
6IRW
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Crystal structure of the human cap-specific adenosine methyltransferase bound to SAH
Descriptor: Phosphorylated CTD-interacting factor 1, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Hirano, S, Nishimasu, H, Ishitani, R, Nureki, O.
Deposit date:2018-11-14
Release date:2018-12-05
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Cap-specific terminal N 6 -methylation of RNA by an RNA polymerase II-associated methyltransferase.
Science, 363, 2019

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PDB entries from 2024-08-07

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