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PDB: 465 件
5B83
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BU of 5b83 by Molmil
Crystal structure of Optineurin UBAN in complex with linear ubiquitin
分子名称: Optineurin, tetra ubiquitin
著者Ishii, R, Nureki, O.
登録日2016-06-12
公開日2016-09-07
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.694 Å)
主引用文献Linear ubiquitination is involved in the pathogenesis of optineurin-associated amyotrophic lateral sclerosis
Nat Commun, 7, 2016
5AYO
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BU of 5ayo by Molmil
Crystal structure of a bacterial homologue of iron transporter ferroportin in inward-facing state
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, POTASSIUM ION, Solute carrier family 39 (Iron-regulated transporter), ...
著者Taniguchi, R, Kato, H.E, Font, J, Deshpande, C.N, Ishitani, R, Jormakka, M, Nureki, O.
登録日2015-08-25
公開日2015-11-04
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Outward- and inward-facing structures of a putative bacterial transition-metal transporter with homology to ferroportin
Nat Commun, 6, 2015
3AQO
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BU of 3aqo by Molmil
Structure and function of a membrane component SecDF that enhances protein export
分子名称: Probable SecDF protein-export membrane protein
著者Echizen, Y, Tsukazaki, T, Ishitani, R, Nureki, O.
登録日2010-11-16
公開日2011-05-18
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure and function of a membrane component SecDF that enhances protein export.
Nature, 474, 2011
3VVP
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BU of 3vvp by Molmil
Crystal structure of MATE in complex with Br-NRF
分子名称: 6-bromo-1-ethyl-4-oxo-7-(piperazin-1-yl)-1,4-dihydroquinoline-3-carboxylic acid, Putative uncharacterized protein
著者Tanaka, Y, Ishitani, R, Nureki, O.
登録日2012-07-27
公開日2013-04-03
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.91 Å)
主引用文献Structural basis for the drug extrusion mechanism by a MATE multidrug transporter.
Nature, 496, 2013
3VUW
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BU of 3vuw by Molmil
Crystal structure of A20 ZF7 in complex with linear ubiquitin, form I
分子名称: POTASSIUM ION, Polyubiquitin-C, Tumor necrosis factor alpha-induced protein 3, ...
著者Nishimasu, H, Ishitani, R, Nureki, O.
登録日2012-07-09
公開日2013-02-13
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Specific recognition of linear polyubiquitin by A20 zinc finger 7 is involved in NF-kappaB regulation
Embo J., 31, 2012
3VVR
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BU of 3vvr by Molmil
Crystal structure of MATE in complex with MaD5
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Putative uncharacterized protein, macrocyclic peptide
著者Tanaka, Y, Ishitani, R, Nureki, O.
登録日2012-07-27
公開日2013-04-03
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural basis for the drug extrusion mechanism by a MATE multidrug transporter.
Nature, 496, 2013
3W1W
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BU of 3w1w by Molmil
Protein-drug complex
分子名称: 1,2-ETHANEDIOL, 2-HYDROXYBENZOIC ACID, CHOLIC ACID, ...
著者Ishii, R, Gupta, V, Yamaguchi, Y, Handa, H, Nureki, O.
登録日2012-11-21
公開日2013-10-09
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.006 Å)
主引用文献Salicylic Acid induces mitochondrial injury by inhibiting ferrochelatase heme biosynthesis activity
Mol.Pharmacol., 84, 2013
3VMF
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BU of 3vmf by Molmil
Archaeal protein
分子名称: Elongation factor 1-alpha, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Kobayashi, K, Saito, K, Ishitani, R, Ito, K, Nureki, O.
登録日2011-12-12
公開日2012-07-25
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural basis for translation termination by archaeal RF1 and GTP-bound EF1alpha complex
Nucleic Acids Res., 40, 2012
3VWA
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BU of 3vwa by Molmil
Crystal structure of Cex1p
分子名称: Cytoplasmic export protein 1
著者Nozawa, K, Ishitani, R, Nureki, O.
登録日2012-08-13
公開日2013-06-05
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of Cex1p reveals the mechanism of tRNA trafficking between nucleus and cytoplasm
Nucleic Acids Res., 41, 2013
3VVO
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BU of 3vvo by Molmil
Crystal structure of MATE in the bent conformation
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Putative uncharacterized protein
著者Tanaka, Y, Ishitani, R, Nureki, O.
登録日2012-07-27
公開日2013-04-03
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.504 Å)
主引用文献Structural basis for the drug extrusion mechanism by a MATE multidrug transporter.
Nature, 496, 2013
3VUX
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BU of 3vux by Molmil
Crystal structure of A20 ZF7 in complex with linear ubiquitin, form II
分子名称: 1,2-ETHANEDIOL, POTASSIUM ION, Polyubiquitin-C, ...
著者Nishimasu, H, Ishitani, R, Nureki, O.
登録日2012-07-09
公開日2013-02-13
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.699 Å)
主引用文献Specific recognition of linear polyubiquitin by A20 zinc finger 7 is involved in NF-kappaB regulation
Embo J., 31, 2012
3VVN
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BU of 3vvn by Molmil
Crystal structure of MATE in the straight conformation
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Putative uncharacterized protein
著者Tanaka, Y, Ishitani, R, Nureki, O.
登録日2012-07-27
公開日2013-04-03
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.398 Å)
主引用文献Structural basis for the drug extrusion mechanism by a MATE multidrug transporter.
Nature, 496, 2013
3VVS
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BU of 3vvs by Molmil
Crystal structure of MATE in complex with MaD3S
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Putative uncharacterized protein, macrocyclic peptide
著者Tanaka, Y, Ishitani, R, Nureki, O.
登録日2012-07-27
公開日2013-04-03
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural basis for the drug extrusion mechanism by a MATE multidrug transporter.
Nature, 496, 2013
3WO7
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BU of 3wo7 by Molmil
Crystal structure of YidC from Bacillus halodurans (form II)
分子名称: COPPER (II) ION, Membrane protein insertase YidC 2
著者Kumazaki, K, Tsukazaki, T, Ishitani, R, Nureki, O.
登録日2013-12-20
公開日2014-04-23
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3.201 Å)
主引用文献Structural basis of Sec-independent membrane protein insertion by YidC.
Nature, 509, 2014
3WUH
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BU of 3wuh by Molmil
Qri7 and AMP complex
分子名称: ADENOSINE MONOPHOSPHATE, ZINC ION, tRNA N6-adenosine threonylcarbamoyltransferase, ...
著者Tominaga, T, Kobayashi, K, Ishii, R, Ishitani, R, Nureki, O.
登録日2014-04-24
公開日2014-09-17
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.937 Å)
主引用文献Structure of Saccharomyces cerevisiae mitochondrial Qri7 in complex with AMP
ACTA CRYSTALLOGR.,SECT.F, 70, 2014
3WAW
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BU of 3waw by Molmil
Crystal Structure of Autotaxin in Complex with 2BoA
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Nishimasu, H, Ishitani, R, Nureki, O.
登録日2013-05-09
公開日2013-07-31
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (1.954 Å)
主引用文献Screening and X-ray Crystal Structure-based Optimization of Autotaxin (ENPP2) Inhibitors, Using a Newly Developed Fluorescence Probe
Acs Chem.Biol., 8, 2013
3WVF
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BU of 3wvf by Molmil
Crystal structure of YidC from Escherichia coli
分子名称: Membrane protein insertase YidC
著者Kumazaki, K, Tsukazaki, T, Kishimoto, T, Ishitani, R, Nureki, O.
登録日2014-05-20
公開日2014-12-17
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Crystal structure of Escherichia coli YidC, a membrane protein chaperone and insertase
Sci Rep, 4, 2014
3WBN
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BU of 3wbn by Molmil
Crystal structure of MATE in complex with MaL6
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, MaL6, Putative uncharacterized protein
著者Tanaka, Y, Ishitani, R, Nureki, O.
登録日2013-05-20
公開日2013-06-12
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Structural basis for the drug extrusion mechanism by a MATE multidrug transporter.
Nature, 496, 2013
3WXM
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BU of 3wxm by Molmil
Crystal structure of archaeal Pelota and GTP-bound EF1 alpha complex
分子名称: Elongation factor 1-alpha, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Kobayashi, K, Ishitani, R, Nureki, O.
登録日2014-08-04
公開日2014-09-03
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural basis for mRNA surveillance by archaeal Pelota and GTP-bound EF1 alpha complex
Proc.Natl.Acad.Sci.USA, 107, 2010
3W4T
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BU of 3w4t by Molmil
Crystal structure of MATE P26A mutant
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Putative uncharacterized protein
著者Tanaka, Y, Ishitani, R, Nureki, O.
登録日2013-01-16
公開日2013-04-03
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.096 Å)
主引用文献Structural basis for the drug extrusion mechanism by a MATE multidrug transporter.
Nature, 496, 2013
3WAV
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BU of 3wav by Molmil
Crystal Structure of Autotaxin in Complex with Compound 10
分子名称: (5Z)-5-(3,4-dichlorobenzylidene)-2-(4-methylpiperazin-1-yl)-1,3-thiazol-4(5H)-one, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Nishimasu, H, Ishitani, R, Nureki, O.
登録日2013-05-09
公開日2013-07-31
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (1.797 Å)
主引用文献Screening and X-ray Crystal Structure-based Optimization of Autotaxin (ENPP2) Inhibitors, Using a Newly Developed Fluorescence Probe
Acs Chem.Biol., 8, 2013
3X3B
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BU of 3x3b by Molmil
Crystal structure of the light-driven sodium pump KR2 in acidic state
分子名称: DI(HYDROXYETHYL)ETHER, OLEIC ACID, RETINAL, ...
著者Kato, H.E, Inoue, K, Abe-Yoshizumi, R, Kato, Y, Ono, H, Konno, M, Ishizuka, T, Hoque, M.R, Hososhima, S, Kunitomo, H, Ito, J, Yoshizawa, S, Yamashita, K, Takemoto, M, Nishizawa, T, Taniguchi, R, Kogure, K, Maturana, A.D, Iino, Y, Yawo, H, Ishitani, R, Kandori, H, Nureki, O.
登録日2015-01-18
公開日2015-04-08
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural basis for Na(+) transport mechanism by a light-driven Na(+) pump
Nature, 521, 2015
3X3C
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BU of 3x3c by Molmil
Crystal structure of the light-driven sodium pump KR2 in neutral state
分子名称: OLEIC ACID, RETINAL, Sodium pumping rhodopsin
著者Kato, H.E, Inoue, K, Abe-Yoshizumi, R, Kato, Y, Ono, H, Konno, M, Ishizuka, T, Hoque, M.R, Hososhima, S, Kunitomo, H, Ito, J, Yoshizawa, S, Yamashita, K, Takemoto, M, Nishizawa, T, Taniguchi, R, Kogure, K, Maturana, A.D, Iino, Y, Yawo, H, Ishitani, R, Kandori, H, Nureki, O.
登録日2015-01-18
公開日2015-04-08
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural basis for Na(+) transport mechanism by a light-driven Na(+) pump
Nature, 521, 2015
3WO6
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BU of 3wo6 by Molmil
Crystal structure of YidC from Bacillus halodurans (form I)
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, CADMIUM ION, Membrane protein insertase YidC 2
著者Kumazaki, K, Tsukazaki, T, Ishitani, R, Nureki, O.
登録日2013-12-20
公開日2014-04-23
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.403 Å)
主引用文献Structural basis of Sec-independent membrane protein insertion by YidC.
Nature, 509, 2014
3WAX
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BU of 3wax by Molmil
Crystal Structure of Autotaxin in Complex with 3BoA
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Nishimasu, H, Ishitani, R, Nureki, O.
登録日2013-05-09
公開日2013-07-31
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.899 Å)
主引用文献Screening and X-ray Crystal Structure-based Optimization of Autotaxin (ENPP2) Inhibitors, Using a Newly Developed Fluorescence Probe
Acs Chem.Biol., 8, 2013

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