3VMF
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![BU of 3vmf by Molmil](/molmil-images/mine/3vmf) | Archaeal protein | 分子名称: | Elongation factor 1-alpha, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ... | 著者 | Kobayashi, K, Saito, K, Ishitani, R, Ito, K, Nureki, O. | 登録日 | 2011-12-12 | 公開日 | 2012-07-25 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | 主引用文献 | Structural basis for translation termination by archaeal RF1 and GTP-bound EF1alpha complex Nucleic Acids Res., 40, 2012
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3VWA
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![BU of 3vwa by Molmil](/molmil-images/mine/3vwa) | Crystal structure of Cex1p | 分子名称: | Cytoplasmic export protein 1 | 著者 | Nozawa, K, Ishitani, R, Nureki, O. | 登録日 | 2012-08-13 | 公開日 | 2013-06-05 | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | 主引用文献 | Crystal structure of Cex1p reveals the mechanism of tRNA trafficking between nucleus and cytoplasm Nucleic Acids Res., 41, 2013
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2DR8
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![BU of 2dr8 by Molmil](/molmil-images/mine/2dr8) | Complex structure of CCA-adding enzyme with tRNAminiDC and CTP | 分子名称: | CCA-adding enzyme, CYTIDINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ... | 著者 | Tomita, K, Ishitani, R, Fukai, S, Nureki, O. | 登録日 | 2006-06-08 | 公開日 | 2006-11-14 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (2.5 Å) | 主引用文献 | Complete crystallographic analysis of the dynamics of CCA sequence addition Nature, 443, 2006
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3VVO
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3VVN
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5Y5M
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![BU of 5y5m by Molmil](/molmil-images/mine/5y5m) | SFX structure of cytochrome P450nor: a complete dark data without pump laser (resting state) | 分子名称: | NADP nitrous oxide-forming nitric oxide reductase, PROTOPORPHYRIN IX CONTAINING FE | 著者 | Tosha, T, Nomura, T, Nishida, T, Saeki, N, Okubayashi, K, Yamagiwa, R, Sugahara, M, Nakane, T, Yamashita, K, Hirata, K, Ueno, G, Kimura, T, Hisano, T, Muramoto, K, Sawai, H, Takeda, H, Mizohata, E, Yamashita, A, Kanematsu, Y, Takano, Y, Nango, E, Tanaka, R, Nureki, O, Ikemoto, Y, Murakami, H, Owada, S, Tono, K, Yabashi, M, Yamamoto, M, Ago, H, Iwata, S, Sugimoto, H, Shiro, Y, Kubo, M. | 登録日 | 2017-08-09 | 公開日 | 2018-08-08 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (2.1 Å) | 主引用文献 | Capturing an initial intermediate during the P450nor enzymatic reaction using time-resolved XFEL crystallography and caged-substrate. Nat Commun, 8, 2017
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5Y5L
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![BU of 5y5l by Molmil](/molmil-images/mine/5y5l) | Time-resolved SFX structure of cytochrome P450nor: dark-2 data in the absence of NADH (resting state) | 分子名称: | NADP nitrous oxide-forming nitric oxide reductase, PROTOPORPHYRIN IX CONTAINING FE | 著者 | Tosha, T, Nomura, T, Nishida, T, Saeki, N, Okubayashi, K, Yamagiwa, R, Sugahara, M, Nakane, T, Yamashita, K, Hirata, K, Ueno, G, Kimura, T, Hisano, T, Muramoto, K, Sawai, H, Takeda, H, Mizohata, E, Yamashita, A, Kanematsu, Y, Takano, Y, Nango, E, Tanaka, R, Nureki, O, Ikemoto, Y, Murakami, H, Owada, S, Tono, K, Yabashi, M, Yamamoto, M, Ago, H, Iwata, S, Sugimoto, H, Shiro, Y, Kubo, M. | 登録日 | 2017-08-09 | 公開日 | 2017-12-06 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (2.1 Å) | 主引用文献 | Capturing an initial intermediate during the P450nor enzymatic reaction using time-resolved XFEL crystallography and caged-substrate. Nat Commun, 8, 2017
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2DRA
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![BU of 2dra by Molmil](/molmil-images/mine/2dra) | Complex structure of CCA-adding enzyme with tRNAminiDCC and ATP | 分子名称: | ADENOSINE-5'-TRIPHOSPHATE, CCA-adding enzyme, MAGNESIUM ION, ... | 著者 | Tomita, K, Ishitani, R, Fukai, S, Nureki, O. | 登録日 | 2006-06-08 | 公開日 | 2006-11-14 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (2.5 Å) | 主引用文献 | Complete crystallographic analysis of the dynamics of CCA sequence addition Nature, 443, 2006
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5Y5I
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![BU of 5y5i by Molmil](/molmil-images/mine/5y5i) | Time-resolved SFX structure of cytochrome P450nor: 20 ms after photo-irradiation of caged NO in the presence of NADH (NO-bound state), light data | 分子名称: | GLYCEROL, NADP nitrous oxide-forming nitric oxide reductase, NITRIC OXIDE, ... | 著者 | Tosha, T, Nomura, T, Nishida, T, Saeki, N, Okubayashi, K, Yamagiwa, R, Sugahara, M, Nakane, T, Yamashita, K, Hirata, K, Ueno, G, Kimura, T, Hisano, T, Muramoto, K, Sawai, H, Takeda, H, Mizohata, E, Yamashita, A, Kanematsu, Y, Takano, Y, Nango, E, Tanaka, R, Nureki, O, Ikemoto, Y, Murakami, H, Owada, S, Tono, K, Yabashi, M, Yamamoto, M, Ago, H, Iwata, S, Sugimoto, H, Shiro, Y, Kubo, M. | 登録日 | 2017-08-09 | 公開日 | 2017-12-06 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (2.1 Å) | 主引用文献 | Capturing an initial intermediate during the P450nor enzymatic reaction using time-resolved XFEL crystallography and caged-substrate. Nat Commun, 8, 2017
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3WUH
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![BU of 3wuh by Molmil](/molmil-images/mine/3wuh) | Qri7 and AMP complex | 分子名称: | ADENOSINE MONOPHOSPHATE, ZINC ION, tRNA N6-adenosine threonylcarbamoyltransferase, ... | 著者 | Tominaga, T, Kobayashi, K, Ishii, R, Ishitani, R, Nureki, O. | 登録日 | 2014-04-24 | 公開日 | 2014-09-17 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2.937 Å) | 主引用文献 | Structure of Saccharomyces cerevisiae mitochondrial Qri7 in complex with AMP ACTA CRYSTALLOGR.,SECT.F, 70, 2014
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5Y5J
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![BU of 5y5j by Molmil](/molmil-images/mine/5y5j) | Time-resolved SFX structure of cytochrome P450nor: dark-2 data in the presence of NADH (resting state) | 分子名称: | GLYCEROL, NADP nitrous oxide-forming nitric oxide reductase, PROTOPORPHYRIN IX CONTAINING FE | 著者 | Tosha, T, Nomura, T, Nishida, T, Saeki, N, Okubayashi, K, Yamagiwa, R, Sugahara, M, Nakane, T, Yamashita, K, Hirata, K, Ueno, G, Kimura, T, Hisano, T, Muramoto, K, Sawai, H, Takeda, H, Mizohata, E, Yamashita, A, Kanematsu, Y, Takano, Y, Nango, E, Tanaka, R, Nureki, O, Ikemoto, Y, Murakami, H, Owada, S, Tono, K, Yabashi, M, Yamamoto, M, Ago, H, Iwata, S, Sugimoto, H, Shiro, Y, Kubo, M. | 登録日 | 2017-08-09 | 公開日 | 2017-12-06 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Capturing an initial intermediate during the P450nor enzymatic reaction using time-resolved XFEL crystallography and caged-substrate. Nat Commun, 8, 2017
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3WBN
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![BU of 3wbn by Molmil](/molmil-images/mine/3wbn) | Crystal structure of MATE in complex with MaL6 | 分子名称: | (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, MaL6, Putative uncharacterized protein | 著者 | Tanaka, Y, Ishitani, R, Nureki, O. | 登録日 | 2013-05-20 | 公開日 | 2013-06-12 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2.45 Å) | 主引用文献 | Structural basis for the drug extrusion mechanism by a MATE multidrug transporter. Nature, 496, 2013
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3WO6
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![BU of 3wo6 by Molmil](/molmil-images/mine/3wo6) | Crystal structure of YidC from Bacillus halodurans (form I) | 分子名称: | (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, CADMIUM ION, Membrane protein insertase YidC 2 | 著者 | Kumazaki, K, Tsukazaki, T, Ishitani, R, Nureki, O. | 登録日 | 2013-12-20 | 公開日 | 2014-04-23 | 最終更新日 | 2024-04-03 | 実験手法 | X-RAY DIFFRACTION (2.403 Å) | 主引用文献 | Structural basis of Sec-independent membrane protein insertion by YidC. Nature, 509, 2014
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3W4T
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![BU of 3w4t by Molmil](/molmil-images/mine/3w4t) | Crystal structure of MATE P26A mutant | 分子名称: | (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Putative uncharacterized protein | 著者 | Tanaka, Y, Ishitani, R, Nureki, O. | 登録日 | 2013-01-16 | 公開日 | 2013-04-03 | 最終更新日 | 2024-03-20 | 実験手法 | X-RAY DIFFRACTION (2.096 Å) | 主引用文献 | Structural basis for the drug extrusion mechanism by a MATE multidrug transporter. Nature, 496, 2013
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5Y5K
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![BU of 5y5k by Molmil](/molmil-images/mine/5y5k) | Time-resolved SFX structure of cytochrome P450nor : 20 ms after photo-irradiation of caged NO in the absence of NADH (NO-bound state), light data | 分子名称: | NADP nitrous oxide-forming nitric oxide reductase, NITRIC OXIDE, PROTOPORPHYRIN IX CONTAINING FE | 著者 | Tosha, T, Nomura, T, Nishida, T, Saeki, N, Okubayashi, K, Yamagiwa, R, Sugahara, M, Nakane, T, Yamashita, K, Hirata, K, Ueno, G, Kimura, T, Hisano, T, Muramoto, K, Sawai, H, Takeda, H, Mizohata, E, Yamashita, A, Kanematsu, Y, Takano, Y, Nango, E, Tanaka, R, Nureki, O, Ikemoto, Y, Murakami, H, Owada, S, Tono, K, Yabashi, M, Yamamoto, M, Ago, H, Iwata, S, Sugimoto, H, Shiro, Y, Kubo, M. | 登録日 | 2017-08-09 | 公開日 | 2017-12-06 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (2.1 Å) | 主引用文献 | Capturing an initial intermediate during the P450nor enzymatic reaction using time-resolved XFEL crystallography and caged-substrate. Nat Commun, 8, 2017
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5H36
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![BU of 5h36 by Molmil](/molmil-images/mine/5h36) | Crystal structures of the TRIC trimeric intracellular cation channel orthologue from Rhodobacter sphaeroides | 分子名称: | 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Uncharacterized protein TRIC | 著者 | Kasuya, G, Hiraizumi, M, Hattori, M, Nureki, O. | 登録日 | 2016-10-20 | 公開日 | 2017-01-11 | 最終更新日 | 2024-03-20 | 実験手法 | X-RAY DIFFRACTION (3.409 Å) | 主引用文献 | Crystal structures of the TRIC trimeric intracellular cation channel orthologues Cell Res., 26, 2016
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5AYN
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![BU of 5ayn by Molmil](/molmil-images/mine/5ayn) | Crystal structure of a bacterial homologue of iron transporter ferroportin in outward-facing state | 分子名称: | (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, POTASSIUM ION, Solute carrier family 39 (Iron-regulated transporter) | 著者 | Taniguchi, R, Kato, H.E, Font, J, Deshpande, C.N, Ishitani, R, Jormakka, M, Nureki, O. | 登録日 | 2015-08-25 | 公開日 | 2015-11-04 | 最終更新日 | 2024-03-20 | 実験手法 | X-RAY DIFFRACTION (2.202 Å) | 主引用文献 | Outward- and inward-facing structures of a putative bacterial transition-metal transporter with homology to ferroportin Nat Commun, 6, 2015
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5B83
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2EF1
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![BU of 2ef1 by Molmil](/molmil-images/mine/2ef1) | Crystal structure of the extracellular domain of human CD38 | 分子名称: | 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ADP-ribosyl cyclase 1 | 著者 | Kukimoto-Niino, M, Nureki, O, Murayama, K, Shirouzu, M, Katada, T, Hara-Yokoyama, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2007-02-20 | 公開日 | 2007-02-27 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | 主引用文献 | Crystal structure of the extracellular domain of human CD38 To be Published
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2EQB
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![BU of 2eqb by Molmil](/molmil-images/mine/2eqb) | Crystal structure of the Rab GTPase Sec4p, the Sec2p GEF domain, and phosphate complex | 分子名称: | PHOSPHATE ION, Rab guanine nucleotide exchange factor SEC2, Ras-related protein SEC4 | 著者 | Sato, Y, Fukai, S, Ishitani, R, Nureki, O. | 登録日 | 2007-03-30 | 公開日 | 2007-05-22 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (2.7 Å) | 主引用文献 | Crystal structure of the Sec4p{middle dot}Sec2p complex in the nucleotide exchanging intermediate state Proc.Natl.Acad.Sci.Usa, 104, 2007
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5AYO
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![BU of 5ayo by Molmil](/molmil-images/mine/5ayo) | Crystal structure of a bacterial homologue of iron transporter ferroportin in inward-facing state | 分子名称: | (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, POTASSIUM ION, Solute carrier family 39 (Iron-regulated transporter), ... | 著者 | Taniguchi, R, Kato, H.E, Font, J, Deshpande, C.N, Ishitani, R, Jormakka, M, Nureki, O. | 登録日 | 2015-08-25 | 公開日 | 2015-11-04 | 最終更新日 | 2024-03-20 | 実験手法 | X-RAY DIFFRACTION (3.3 Å) | 主引用文献 | Outward- and inward-facing structures of a putative bacterial transition-metal transporter with homology to ferroportin Nat Commun, 6, 2015
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5B43
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![BU of 5b43 by Molmil](/molmil-images/mine/5b43) | Crystal structure of Acidaminococcus sp. Cpf1 in complex with crRNA and target DNA | 分子名称: | 1,2-ETHANEDIOL, CRISPR-associated endonuclease Cpf1, DNA (34-MER), ... | 著者 | Yamano, T, Nishimasu, H, Hirano, H, Nakane, T, Ishitani, R, Nureki, O. | 登録日 | 2016-03-30 | 公開日 | 2016-05-04 | 最終更新日 | 2024-03-20 | 実験手法 | X-RAY DIFFRACTION (2.8 Å) | 主引用文献 | Crystal Structure of Cpf1 in Complex with Guide RNA and Target DNA Cell, 165, 2016
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2DR5
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![BU of 2dr5 by Molmil](/molmil-images/mine/2dr5) | Complex structure of CCA adding enzyme with mini-helix lacking CCA | 分子名称: | CCA-adding enzyme, SULFATE ION, tRNA (32-MER) | 著者 | Tomita, K, Ishitani, R, Fukai, S, Nureki, O. | 登録日 | 2006-06-08 | 公開日 | 2006-10-31 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (2.8 Å) | 主引用文献 | Complete crystallographic analysis of the dynamics of CCA sequence addition Nature, 443, 2006
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2DR7
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![BU of 2dr7 by Molmil](/molmil-images/mine/2dr7) | Complex structure of CCA-adding enzyme with tRNAminiDC | 分子名称: | CCA-adding enzyme, SULFATE ION, tRNA (33-MER) | 著者 | Tomita, K, Ishitani, R, Fukai, S, Nureki, O. | 登録日 | 2006-06-08 | 公開日 | 2006-11-14 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (2.8 Å) | 主引用文献 | Complete crystallographic analysis of the dynamics of CCA sequence addition Nature, 443, 2006
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2DRB
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![BU of 2drb by Molmil](/molmil-images/mine/2drb) | Complex structure of CCA-adding enzyme with tRNAminiCCA | 分子名称: | CCA-adding enzyme, SULFATE ION, tRNA (35-MER) | 著者 | Tomita, K, Ishitani, R, Fukai, S, Nureki, O. | 登録日 | 2006-06-08 | 公開日 | 2006-11-14 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (2.8 Å) | 主引用文献 | Complete crystallographic analysis of the dynamics of CCA sequence addition Nature, 443, 2006
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