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PDB: 296 results

1PTJ
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BU of 1ptj by Molmil
Crystal structure analysis of the DI and DIII complex of transhydrogenase with a thio-nicotinamide nucleotide analogue
Descriptor: GLYCEROL, NAD(P) transhydrogenase subunit alpha part 1, NAD(P) transhydrogenase subunit beta, ...
Authors:Singh, A, Venning, J.D, Quirk, P.G, van Boxel, G.I, Rodrigues, D.J, White, S.A, Jackson, J.B.
Deposit date:2003-06-23
Release date:2003-10-07
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Interactions between transhydrogenase and thio-nicotinamide analogues of NAD(H) and NADP(H) underline the importance of nucleotide conformational changes in coupling to proton translocation
J.Biol.Chem., 278, 2003
8BK0
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BU of 8bk0 by Molmil
Crystal structure of human Ephrin type-A receptor 2 (EPHA2) Kinase domain in complex with LDN-211904
Descriptor: 1,2-ETHANEDIOL, Ephrin type-A receptor 2, ~{N}-(2-chlorophenyl)-6-piperidin-4-yl-imidazo[1,2-a]pyridine-3-carboxamide
Authors:Zhubi, R, Gerninghaus, J, Knapp, S, Kraemer, A, Structural Genomics Consortium (SGC)
Deposit date:2022-11-08
Release date:2022-11-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of human Ephrin type-A receptor 2 (EPHA2) Kinase domain in complex with LDN-211904
To Be Published
3J42
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BU of 3j42 by Molmil
Obstruction of Dengue Virus Maturation by Fab Fragments of the 2H2 Antibody
Descriptor: Envelope protein E, Ig heavy chain V region MOPC 21, Igh protein chimera, ...
Authors:Wang, Z, Pennington, J.G, Jiang, W, Rossmann, M.G.
Deposit date:2013-06-13
Release date:2013-07-17
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (21 Å)
Cite:Obstruction of Dengue Virus Maturation by Fab Fragments of the 2H2 Antibody.
J.Virol., 87, 2013
5U6U
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BU of 5u6u by Molmil
The crystal structure of 4-ethylthiobenzoate-bound CYP199A4
Descriptor: 4-(ethylsulfanyl)benzoic acid, CHLORIDE ION, Cytochrome P450, ...
Authors:Coleman, T, Bruning, J.B, Bell, S.G.
Deposit date:2016-12-08
Release date:2018-06-13
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.786 Å)
Cite:Cytochrome P450 CYP199A4 from Rhodopseudomonas palustris Catalyzes Heteroatom Dealkylations, Sulfoxidation, and Amide and Cyclic Hemiacetal Formation
Acs Catalysis, 8, 2018
5U6T
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BU of 5u6t by Molmil
The crystal structure of 4-ethoxybenzoate-bound CYP199A4
Descriptor: 4-ethoxybenzoic acid, CHLORIDE ION, Cytochrome P450, ...
Authors:Coleman, T, Bruning, J.B, Bell, S.G.
Deposit date:2016-12-08
Release date:2018-06-13
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.935 Å)
Cite:Cytochrome P450 CYP199A4 from Rhodopseudomonas palustris Catalyzes Heteroatom Dealkylations, Sulfoxidation, and Amide and Cyclic Hemiacetal Formation
Acs Catalysis, 8, 2018
7LDV
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BU of 7ldv by Molmil
Zoogloea ramigera biosynthetic thiolase Q183Y/Y218E/delH221/S227K mutant
Descriptor: AMMONIUM ION, Acetyl-CoA acetyltransferase, CHLORIDE ION, ...
Authors:Marshall, A.C, Bruning, J.B.
Deposit date:2021-01-14
Release date:2021-09-01
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Engineering potassium activation into biosynthetic thiolase.
Biochem.J., 478, 2021
7LDU
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BU of 7ldu by Molmil
Zoogloea ramigera biosynthetic thiolase Q183Y/Y218E/delH221 mutant
Descriptor: Acetyl-CoA acetyltransferase, CHLORIDE ION, COENZYME A, ...
Authors:Marshall, A.C, Bruning, J.B.
Deposit date:2021-01-14
Release date:2021-09-01
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Engineering potassium activation into biosynthetic thiolase.
Biochem.J., 478, 2021
7LDW
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BU of 7ldw by Molmil
Zoogloea ramigera biosynthetic thiolase Q183Y/Y218E/delH221/S227K/G248T mutant
Descriptor: AMMONIUM ION, Acetyl-CoA acetyltransferase, COENZYME A, ...
Authors:Marshall, A.C, Bruning, J.B.
Deposit date:2021-01-14
Release date:2021-09-01
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Engineering potassium activation into biosynthetic thiolase.
Biochem.J., 478, 2021
7LDC
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BU of 7ldc by Molmil
Zoogloea ramigera biosynthetic thiolase Q183Y/Y218E mutant
Descriptor: Acetyl-CoA acetyltransferase, COENZYME A, SULFATE ION
Authors:Marshall, A.C, Bruning, J.B.
Deposit date:2021-01-13
Release date:2021-09-01
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Engineering potassium activation into biosynthetic thiolase.
Biochem.J., 478, 2021
7LCA
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BU of 7lca by Molmil
Zoogloea ramigera biosynthetic thiolase Y218E/delH221 mutant
Descriptor: Acetyl-CoA acetyltransferase, CHLORIDE ION, COENZYME A, ...
Authors:Marshall, A.C, Bruning, J.B.
Deposit date:2021-01-10
Release date:2021-09-01
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2 Å)
Cite:Engineering potassium activation into biosynthetic thiolase.
Biochem.J., 478, 2021
7LD2
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BU of 7ld2 by Molmil
Zoogloea ramigera biosynthetic thiolase Q183Y mutant, RbCl soak
Descriptor: Acetyl-CoA acetyltransferase, CHLORIDE ION, COENZYME A, ...
Authors:Marshall, A.C, Bruning, J.B.
Deposit date:2021-01-12
Release date:2021-09-01
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Engineering potassium activation into biosynthetic thiolase.
Biochem.J., 478, 2021
7LCL
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BU of 7lcl by Molmil
Zoogloea ramigera biosynthetic thiolase Q183Y mutant
Descriptor: AMMONIUM ION, Acetyl-CoA acetyltransferase, COENZYME A, ...
Authors:Marshall, A.C, Bruning, J.B.
Deposit date:2021-01-11
Release date:2021-09-01
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.295 Å)
Cite:Engineering potassium activation into biosynthetic thiolase.
Biochem.J., 478, 2021
7LBZ
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BU of 7lbz by Molmil
Zoogloea ramigera biosynthetic thiolase Y218E mutant
Descriptor: Acetyl-CoA acetyltransferase, COENZYME A, SULFATE ION
Authors:Marshall, A.C, Bruning, J.B.
Deposit date:2021-01-09
Release date:2021-09-01
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Engineering potassium activation into biosynthetic thiolase.
Biochem.J., 478, 2021
7LDT
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BU of 7ldt by Molmil
Zoogloea ramigera biosynthetic thiolase Q183Y/Y218E mutant, RbCl soak
Descriptor: Acetyl-CoA acetyltransferase, COENZYME A, RUBIDIUM ION, ...
Authors:Marshall, A.C, Bruning, J.B.
Deposit date:2021-01-14
Release date:2021-09-01
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Engineering potassium activation into biosynthetic thiolase.
Biochem.J., 478, 2021
3I54
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BU of 3i54 by Molmil
Crystal structure of MtbCRP in complex with cAMP
Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Transcriptional regulator, Crp/Fnr family
Authors:Reddy, M.C, Palaninathan, S.K, Bruning, J.B, Thurman, C, Smith, D, Sacchettini, J.C, TB Structural Genomics Consortium (TBSGC)
Deposit date:2009-07-03
Release date:2009-09-08
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Insights into the Mechanism of the Allosteric Transitions of Mycobacterium tuberculosis cAMP Receptor Protein.
J.Biol.Chem., 284, 2009
6DI8
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BU of 6di8 by Molmil
Crystal structure of bovine alpha-chymotrypsin in space group P65
Descriptor: Chymotrypsin A chain A, Chymotrypsin A chain B, Chymotrypsin A chain C, ...
Authors:Marshall, A.C, Keiller, B.G, Bruning, J.B.
Deposit date:2018-05-23
Release date:2019-01-23
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.859 Å)
Cite:Crystal Structure of Bovine Alpha-Chymotrypsin in Space Group P65
Crystals, 8, 2018
1PT9
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BU of 1pt9 by Molmil
Crystal Structure Analysis of the DIII Component of Transhydrogenase with a Thio-Nicotinamide Nucleotide Analogue
Descriptor: 7-THIONICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, GLYCEROL, NAD(P) transhydrogenase, ...
Authors:Singh, A, Venning, J.D, Quirk, P.G, van Boxel, G.I, Rodrigues, D.J, White, S.A, Jackson, J.B.
Deposit date:2003-06-23
Release date:2003-10-07
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.42 Å)
Cite:Interactions between transhydrogenase and thio-nicotinamide analogues of NAD(H) and NADP(H) underline the importance of nucleotide conformational changes in coupling to proton translocation
J.Biol.Chem., 278, 2003
6OOX
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BU of 6oox by Molmil
The crystal structure of 4-isopropylbenzoate bound to T252A mutant of CYP199A4
Descriptor: 4-propan-2-ylbenzoic acid, CHLORIDE ION, Cytochrome P450, ...
Authors:Coleman, T, Bruning, J.B, Bell, S.G.
Deposit date:2019-04-23
Release date:2020-04-29
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.774 Å)
Cite:Structural investigation of the interplay between the substrate and the acid-alcohol pair of residues in cytochrome P450 enzymes
To Be Published
7JVT
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BU of 7jvt by Molmil
Crystal structure of a lambda-186 hybrid repressor
Descriptor: OL1 bottom, OL1 top, Repressor protein CI
Authors:Truong, J.Q, Bruning, J.B, Shearwin, K.E.
Deposit date:2020-08-23
Release date:2021-09-08
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.16 Å)
Cite:Crystal structure of a hybrid lambda-186 repressor
To Be Published
4IBG
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BU of 4ibg by Molmil
Ebola virus VP35 bound to small molecule
Descriptor: GLYCEROL, PHOSPHATE ION, Polymerase cofactor VP35, ...
Authors:Brown, C.S, Leung, D.W, Xu, W, Borek, D.M, Otwinowski, Z, Ramanan, P, Stubbs, A.J, Peterson, D.S, Binning, J.M, Amarasinghe, G.K.
Deposit date:2012-12-08
Release date:2014-03-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.413 Å)
Cite:In Silico Derived Small Molecules Bind the Filovirus VP35 Protein and Inhibit Its Polymerase Cofactor Activity.
J.Mol.Biol., 426, 2014
4IBB
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BU of 4ibb by Molmil
Ebola virus VP35 bound to small molecule
Descriptor: Polymerase cofactor VP35, {4-[(5R)-3-hydroxy-2-oxo-4-(thiophen-2-ylcarbonyl)-5-(2,4,5-trimethylphenyl)-2,5-dihydro-1H-pyrrol-1-yl]phenyl}acetic acid
Authors:Brown, C.S, Leung, D.W, Xu, W, Borek, D.M, Otwinowski, Z, Ramanan, P, Stubbs, A.J, Peterson, D.S, Binning, J.M, Amarasinghe, G.K, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2012-12-08
Release date:2014-02-26
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.752 Å)
Cite:In Silico Derived Small Molecules Bind the Filovirus VP35 Protein and Inhibit Its Polymerase Cofactor Activity.
J.Mol.Biol., 426, 2014
4IBD
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BU of 4ibd by Molmil
Ebola virus VP35 bound to small molecule
Descriptor: 5-[(2R)-3-benzoyl-2-(4-bromothiophen-2-yl)-4-hydroxy-5-oxo-2,5-dihydro-1H-pyrrol-1-yl]-2-methylbenzoic acid, GLYCEROL, MAGNESIUM ION, ...
Authors:Brown, C.S, Leung, D.W, Xu, W, Borek, D.M, Otwinowski, Z, Ramanan, P, Stubbs, A.J, Peterson, D.S, Binning, J.M, Amarasinghe, G.K.
Deposit date:2012-12-08
Release date:2014-03-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:In Silico Derived Small Molecules Bind the Filovirus VP35 Protein and Inhibit Its Polymerase Cofactor Activity.
J.Mol.Biol., 426, 2014
4IBJ
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BU of 4ibj by Molmil
Ebola virus VP35 bound to small molecule
Descriptor: 3-{(5S)-3-hydroxy-2-oxo-4-[3-(trifluoromethyl)benzoyl]-5-[3-(trifluoromethyl)phenyl]-2,5-dihydro-1H-pyrrol-1-yl}benzoic acid, Polymerase cofactor VP35
Authors:Brown, C.S, Leung, D.W, Xu, W, Borek, D.M, Otwinowski, Z, Ramanan, P, Stubbs, A.J, Peterson, D.S, Binning, J.M, Amarasinghe, G.K.
Deposit date:2012-12-08
Release date:2014-03-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:In Silico Derived Small Molecules Bind the Filovirus VP35 Protein and Inhibit Its Polymerase Cofactor Activity.
J.Mol.Biol., 426, 2014
4IBI
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BU of 4ibi by Molmil
Ebola virus VP35 bound to small molecule
Descriptor: 3-{(2S)-2-(7-chloro-1,3-benzodioxol-5-yl)-4-hydroxy-5-oxo-3-[3-(trifluoromethyl)benzoyl]-2,5-dihydro-1H-pyrrol-1-yl}benzoic acid, Polymerase cofactor VP35
Authors:Brown, C.S, Leung, D.W, Xu, W, Borek, D.M, Otwinowski, Z, Ramanan, P, Stubbs, A.J, Peterson, D.S, Binning, J.M, Amarasinghe, G.K.
Deposit date:2012-12-08
Release date:2014-03-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.473 Å)
Cite:In Silico Derived Small Molecules Bind the Filovirus VP35 Protein and Inhibit Its Polymerase Cofactor Activity.
J.Mol.Biol., 426, 2014
4IBC
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BU of 4ibc by Molmil
Ebola virus VP35 bound to small molecule
Descriptor: DIMETHYL SULFOXIDE, Polymerase cofactor VP35, {4-[(2R)-3-(2-chlorobenzoyl)-2-(2-chlorophenyl)-4-hydroxy-5-oxo-2,5-dihydro-1H-pyrrol-1-yl]phenyl}acetic acid
Authors:Brown, C.S, Leung, D.W, Xu, W, Borek, D.M, Otwinowski, Z, Ramanan, P, Stubbs, A.J, Peterson, D.S, Binning, J.M, Amarasinghe, G.K.
Deposit date:2012-12-08
Release date:2014-03-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.745 Å)
Cite:In Silico Derived Small Molecules Bind the Filovirus VP35 Protein and Inhibit Its Polymerase Cofactor Activity.
J.Mol.Biol., 426, 2014

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