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PDB: 204 件
6E3D
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BU of 6e3d by Molmil
Atomic structure of Mycobacterium tuberculosis DppA
分子名称: Periplasmic dipeptide-binding lipoprotein DPPA, tetra-peptide picked up from the expression host
著者Ko, Y, Mitra, A, Niederweis, M, Cingolani, G.
登録日2018-07-13
公開日2019-09-11
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.271 Å)
主引用文献Heme and hemoglobin utilization by Mycobacterium tuberculosis.
Nat Commun, 10, 2019
7ZQI
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BU of 7zqi by Molmil
MHC class I from a wild bird in complex with a nonameric peptide P2
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Beta-2-microglobulin, CHLORIDE ION, ...
著者Eltschkner, S, Mellinger, S, Buus, S, Nielsen, M, Paulsson, K.M, Lindkvist-Petersson, K, Westerdahl, H.
登録日2022-04-29
公開日2023-05-10
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献The structure of songbird MHC class I reveals antigen binding that is flexible at the N-terminus and static at the C-terminus.
Front Immunol, 14, 2023
7ZQJ
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MHC class I from a wild bird in complex with a nonameric peptide P3
分子名称: ACETATE ION, Beta-2-microglobulin, MHC class I antigen, ...
著者Eltschkner, S, Mellinger, S, Buus, S, Nielsen, M, Paulsson, K.M, Lindkvist-Petersson, K, Westerdahl, H.
登録日2022-04-29
公開日2023-05-10
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献The structure of songbird MHC class I reveals antigen binding that is flexible at the N-terminus and static at the C-terminus.
Front Immunol, 14, 2023
2ONX
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BU of 2onx by Molmil
NNQQ peptide corresponding to residues 8-11 of yeast prion sup35 (alternate crystal form)
分子名称: peptide corresponding to residues 8-11 of yeast prion sup35
著者Sawaya, M.R, Sambashivan, S, Nelson, R, Ivanova, M, Sievers, S.A, Apostol, M.I, Thompson, M.J, Balbirnie, M, Wiltzius, J.J, McFarlane, H, Madsen, A.O, Riekel, C, Eisenberg, D.
登録日2007-01-24
公開日2007-02-06
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.52 Å)
主引用文献Atomic structures of amyloid cross-beta spines reveal varied steric zippers.
Nature, 447, 2007
1P4O
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BU of 1p4o by Molmil
Structure of Apo unactivated IGF-1R KInase domain at 1.5A resolution.
分子名称: Insulin-like growth factor I receptor protein
著者Munshi, S, Kornienko, M, Hall, D.L, Darke, P.L, Waxman, L, Kuo, L.C.
登録日2003-04-23
公開日2003-04-29
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structure of apo, unactivated insulin-like growth factor-1 receptor kinase at 1.5 A resolution.
Acta Crystallogr.,Sect.D, 59, 2003
4MDT
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BU of 4mdt by Molmil
Structure of LpxC bound to the reaction product UDP-(3-O-(R-3-hydroxymyristoyl))-glucosamine
分子名称: PHOSPHATE ION, UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase, ZINC ION, ...
著者Clayton, G.M, Klein, D.J, Rickert, K.W, Patel, S.B, Kornienko, M, Zugay-Murphy, J, Reid, J.C, Tummala, S, Sharma, S, Singh, S.B, Miesel, L, Lumb, K.J, Soisson, S.M.
登録日2013-08-23
公開日2013-10-16
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.59 Å)
主引用文献Structure of the Bacterial Deacetylase LpxC Bound to the Nucleotide Reaction Product Reveals Mechanisms of Oxyanion Stabilization and Proton Transfer.
J.Biol.Chem., 288, 2013
1PX8
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Crystal structure of beta-D-xylosidase from Thermoanaerobacterium saccharolyticum, a family 39 glycoside hydrolase
分子名称: Beta-xylosidase, beta-D-xylopyranose
著者Yang, J.K, Yoon, H.J, Ahn, H.J, Il Lee, B, Pedelacq, J.D, Liong, E.C, Berendzen, J, Laivenieks, M, Vieille, C, Zeikus, G.J, Vocadlo, D.J, Withers, S.G, Suh, S.W.
登録日2003-07-03
公開日2003-12-23
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of beta-D-xylosidase from Thermoanaerobacterium saccharolyticum, a family 39 glycoside hydrolase.
J.Mol.Biol., 335, 2004
3DY5
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BU of 3dy5 by Molmil
Allene oxide synthase 8R-lipoxygenase from Plexaura homomalla
分子名称: Allene oxide synthase-lipoxygenase protein, FE (II) ION, PROTOPORPHYRIN IX CONTAINING FE
著者Gilbert, N.C, Niebuhr, M, Tsuruta, H, Newcomer, M.E.
登録日2008-07-25
公開日2008-10-07
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (3.51 Å)
主引用文献A covalent linker allows for membrane targeting of an oxylipin biosynthetic complex.
Biochemistry, 47, 2008
1W6V
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Solution structure of the DUSP domain of hUSP15
分子名称: UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 15
著者De Jong, R.D, Ab, E, Diercks, T, Truffault, V, Daniels, M, Kaptein, R, Folkers, G.E.
登録日2004-08-24
公開日2006-01-12
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution Structure of the Human Ubiquitin-Specific Protease 15 Dusp Domain.
J.Biol.Chem., 281, 2006
2QI9
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BU of 2qi9 by Molmil
ABC-transporter BtuCD in complex with its periplasmic binding protein BtuF
分子名称: DI(HYDROXYETHYL)ETHER, PENTAETHYLENE GLYCOL, PHOSPHATE ION, ...
著者Hvorup, R.N, Goetz, B.A, Niederer, M, Hollenstein, K, Perozo, E, Locher, K.P.
登録日2007-07-03
公開日2007-08-14
最終更新日2021-10-20
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Asymmetry in the structure of the ABC transporter-binding protein complex BtuCD-BtuF.
Science, 317, 2007
1WQJ
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BU of 1wqj by Molmil
Structural Basis for the Regulation of Insulin-Like Growth Factors (IGFs) by IGF Binding Proteins (IGFBPs)
分子名称: Insulin-like growth factor IB, Insulin-like growth factor binding protein 4
著者Siwanowicz, I, Popowicz, G.M, Wisniewska, M, Huber, R, Kuenkele, K.P, Lang, K, Engh, R.A, Holak, T.A.
登録日2004-09-29
公開日2005-03-01
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural basis for the regulation of insulin-like growth factors by IGF binding proteins
Structure, 13, 2005
1YJO
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BU of 1yjo by Molmil
Structure of NNQQNY from yeast prion Sup35 with zinc acetate
分子名称: ACETIC ACID, Eukaryotic peptide chain release factor GTP-binding subunit, ZINC ION
著者Nelson, R, Sawaya, M.R, Balbirnie, M, Madsen, A.O, Riekel, C, Grothe, R, Eisenberg, D.
登録日2005-01-15
公開日2005-06-14
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Structure of the cross-beta spine of amyloid-like fibrils.
Nature, 435, 2005
1YJP
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Structure of GNNQQNY from yeast prion Sup35
分子名称: Eukaryotic peptide chain release factor GTP-binding subunit
著者Nelson, R, Sawaya, M.R, Balbirnie, M, Madsen, A.O, Riekel, C, Grothe, R, Eisenberg, D.
登録日2005-01-15
公開日2005-06-14
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure of the cross-beta spine of amyloid-like fibrils.
Nature, 435, 2005
1YGG
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BU of 1ygg by Molmil
Crystal structure of phosphoenolpyruvate carboxykinase from Actinobacillus succinogenes
分子名称: SODIUM ION, SULFATE ION, phosphoenolpyruvate carboxykinase
著者Leduc, Y.A, Prasad, L, Laivenieks, M, Zeikus, J.G, Delbaere, L.T.
登録日2005-01-04
公開日2005-06-28
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structure of PEP carboxykinase from the succinate-producing Actinobacillus succinogenes: a new conserved active-site motif.
Acta Crystallogr.,Sect.D, 61, 2005
1YLH
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BU of 1ylh by Molmil
Crystal Structure of Phosphoenolpyruvate Carboxykinase from Actinobaccilus succinogenes in Complex with Manganese and Pyruvate
分子名称: (2S,3S)-2,3-DIHYDROXY-4-SULFANYLBUTANE-1-SULFONATE, BETA-MERCAPTOETHANOL, FORMIC ACID, ...
著者Leduc, Y.A, Prasad, L, Laivenieks, M, Zeikus, J.G, Delbaere, L.T.
登録日2005-01-19
公開日2005-06-28
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure of PEP carboxykinase from the succinate-producing Actinobacillus succinogenes: a new conserved active-site motif.
Acta Crystallogr.,Sect.D, 61, 2005
1YVY
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Crystal structure of Anaerobiospirillum succiniciproducens phosphoenolpyruvate carboxykinase
分子名称: Phosphoenolpyruvate carboxykinase [ATP]
著者Cotelesage, J.J, Prasad, L, Zeikus, J.G, Laivenieks, M, Delbaere, L.T.
登録日2005-02-16
公開日2005-07-26
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Crystal structure of Anaerobiospirillum succiniciproducens PEP carboxykinase reveals an important active site loop.
Int.J.Biochem.Cell Biol., 37, 2005
2XXZ
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BU of 2xxz by Molmil
Crystal structure of the human JMJD3 jumonji domain
分子名称: 1,2-ETHANEDIOL, 8-hydroxyquinoline-5-carboxylic acid, LYSINE-SPECIFIC DEMETHYLASE 6B, ...
著者Che, K.H, Yue, W.W, Krojer, T, Muniz, J.R.C, Ng, S.S, Tumber, A, Daniel, M, Burgess-Brown, N, Savitsky, P, Ugochukwu, E, Filippakopoulos, P, Arrowsmith, C, Weigelt, J, Edwards, A, Bountra, C, Oppermann, U.
登録日2010-11-12
公開日2010-11-24
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal Structure of the Human Jmjd3 Jumonji Domain
To be Published
2XDP
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Crystal structure of the tudor domain of human JMJD2C
分子名称: LYSINE-SPECIFIC DEMETHYLASE 4C, SULFATE ION
著者Yue, W.W, Gileadi, C, Krojer, T, Weisbach, H, Ugochukwu, E, Daniel, M, Phillips, C, Chaikuad, A, von Delft, F, Allerston, C, Arrowsmith, C, Weigelt, J, Edwards, A, Bountra, C, Oppermann, U.
登録日2010-05-06
公開日2010-06-09
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.56 Å)
主引用文献Crystal Structure of the Tudor Domain of Human Jmjd2C
To be Published
2JOB
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BU of 2job by Molmil
Solution structure of an antilipopolysaccharide factor from shrimp and its possible Lipid A binding site
分子名称: antilipopolysaccharide factor
著者Yang, Y, Boze, H, Chemardin, P, Padilla, A, Moulin, G, Tassanakajon, A, Pugniere, M, Roquet, F, Gueguen, Y, Bachere, E, Aumelas, A.
登録日2007-03-02
公開日2008-03-11
最終更新日2023-12-20
実験手法SOLUTION NMR
主引用文献NMR structure of rALF-Pm3, an anti-lipopolysaccharide factor from shrimp: Model of the possible lipid A-binding site
Biopolymers, 91, 2009
5NM7
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Crystal structure of Burkholderia AP3 phage endolysin
分子名称: GLYCINE, Peptidoglycan-binding domain 1, TRIETHYLENE GLYCOL
著者Zrubek, K, Wisniewska, M, Rembacz, K, Maciejewska, B, Drulis-Kawa, Z, Dubin, G.
登録日2017-04-05
公開日2018-02-14
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Modular endolysin of Burkholderia AP3 phage has the largest lysozyme-like catalytic subunit discovered to date and no catalytic aspartate residue.
Sci Rep, 7, 2017
2KSM
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BU of 2ksm by Molmil
Central B domain of Rv0899 from Mycobacterium tuberculosis
分子名称: MYCOBACTERIUM TUBERCULOSIS RV0899/MT0922/OmpATb
著者Teriete, P, Yao, Y, Kolodzik, A, Yu, J, Song, H, Niederweis, M, Marassi, F.M.
登録日2010-01-07
公開日2010-02-02
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Mycobacterium tuberculosis Rv0899 adopts a mixed alpha/beta-structure and does not form a transmembrane beta-barrel.
Biochemistry, 49, 2010
2C06
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BU of 2c06 by Molmil
NMR-based model of the complex of the toxin Kid and a 5-nucleotide substrate RNA fragment (AUACA)
分子名称: 5'-R(*AP*UP*AP*CP*AP)-3', KID TOXIN PROTEIN
著者Kamphuis, M.B, Bonvin, A.M.J.J, Monti, M.C, Lemonnier, M, Munoz-Gomez, A, Van Den Heuvel, R.H.H, Diaz-Orejas, R, Boelens, R.
登録日2005-08-25
公開日2006-02-08
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Model for RNA Binding and the Catalytic Site of the Rnase Kid of the Bacterial Pard Toxin-Antitoxin System.
J.Mol.Biol., 357, 2006
1UHV
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BU of 1uhv by Molmil
Crystal structure of beta-D-xylosidase from Thermoanaerobacterium saccharolyticum, a family 39 glycoside hydrolase
分子名称: 1,5-anhydro-2-deoxy-2-fluoro-D-xylitol, Beta-xylosidase
著者Yang, J.K, Yoon, H.J, Ahn, H.J, Il Lee, B, Pedelacq, J.D, Liong, E.C, Berendzen, J, Laivenieks, M, Vieille, C, Zeikus, G.J, Vocadlo, D.J, Withers, S.G, Suh, S.W.
登録日2003-07-11
公開日2003-12-23
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of beta-D-xylosidase from Thermoanaerobacterium saccharolyticum, a family 39 glycoside hydrolase.
J.Mol.Biol., 335, 2004
2CKA
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BU of 2cka by Molmil
Solution structures of the BRK domains of the human Chromo Helicase Domain 7 and 8, reveals structural similarity with GYF domain suggesting a role in protein interaction
分子名称: CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 8
著者Ab, E, de Jong, R.N, Diercks, T, Xiaoyun, J, Daniels, M, Kaptein, R, Folkers, G.E.
登録日2006-04-14
公開日2007-05-08
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Solution Structures of the Brk Domains of the Human Chromo Helicase Domain 7 and 8, Reveals Structural Similarity with Gyf Domain Suggesting a Role in Protein Interaction
To be Published
2CKC
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Solution structures of the BRK domains of the human Chromo Helicase Domain 7 and 8, reveals structural similarity with GYF domain suggesting a role in protein interaction
分子名称: CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 7
著者Ab, E, de Jong, R.N, Diercks, T, Xiaoyun, J, Daniels, M, Kaptein, R, Folkers, G.E.
登録日2006-04-14
公開日2007-05-08
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution Structures of the Brk Domains of the Human Chromo Helicase Domain 7 and 8, Reveals Structural Similarity with Gyf Domain Suggesting a Role in Protein Interaction
To be Published

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