1PX8

Crystal structure of beta-D-xylosidase from Thermoanaerobacterium saccharolyticum, a family 39 glycoside hydrolase

Summary for 1PX8

DescriptorBeta-xylosidase, BETA-D-XYLOPYRANOSE (3 entities in total)
Functional Keywordsfamily 39 glycoside hydrolase, xylosidase, xylan, xylose, covalent glycosyl-enzyme intermediate, hydrolase
Biological sourceThermoanaerobacterium saccharolyticum
Total number of polymer chains2
Total molecular weight117778.62
Authors
Yang, J.K.,Yoon, H.J.,Ahn, H.J.,Il Lee, B.,Pedelacq, J.D.,Liong, E.C.,Berendzen, J.,Laivenieks, M.,Vieille, C.,Zeikus, G.J.,Vocadlo, D.J.,Withers, S.G.,Suh, S.W. (deposition date: 2003-07-03, release date: 2003-12-23, Last modification date: 2011-07-13)
Primary citation
Yang, J.K.,Yoon, H.J.,Ahn, H.J.,Lee, B.I.,Pedelacq, J.D.,Liong, E.C.,Berendzen, J.,Laivenieks, M.,Vieille, C.,Zeikus, G.J.,Vocadlo, D.J.,Withers, S.G.,Suh, S.W.
Crystal structure of beta-D-xylosidase from Thermoanaerobacterium saccharolyticum, a family 39 glycoside hydrolase.
J.Mol.Biol., 335:155-165, 2004
PubMed: 14659747 (PDB entries with the same primary citation)
DOI: 10.1016/j.jmb.2003.10.026
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (2.4 Å)
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Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers0.275241.6%5.4%2.6%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

Molmil generated image of 1px8
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Molmil generated image of 1px8
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Molmil generated image of 1px8
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More Biological unit images

Molmil generated image of 1px8
no rotation
Molmil generated image of 1px8
rotated about x axis by 90°
Molmil generated image of 1px8
rotated about y axis by 90°
(*)In the case of coarse surface representation, the asymmetric unit is shown as red ribbon representation.
Coordinate files for Biological unit (1px8.pdb1.gz [345.26 KB])