2XDP

Crystal structure of the tudor domain of human JMJD2C

Summary for 2XDP

DescriptorLYSINE-SPECIFIC DEMETHYLASE 4C, SULFATE ION (3 entities in total)
Functional Keywordsoxidoreductase, histone modification
Biological sourceHOMO SAPIENS (HUMAN)
Cellular locationNucleus  Q9H3R0
Total number of polymer chains1
Total molecular weight14249.11
Authors
Primary citation
Yue, W.W.,Gileadi, C.,Krojer, T.,Weisbach, H.,Ugochukwu, E.,Daniel, M.,Phillips, C.,Chaikuad, A.,von Delft, F.,Allerston, C.,Arrowsmith, C.,Weigelt, J.,Edwards, A.,Bountra, C.,Oppermann, U.
Crystal Structure of the Tudor Domain of Human Jmjd2C
To be Published,
Experimental method
X-RAY DIFFRACTION (1.56 Å)
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Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers0.207701.0%4.2%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

Molmil generated image of 2xdp
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Molmil generated image of 2xdp
rotated about x axis by 90°
Molmil generated image of 2xdp
rotated about y axis by 90°

More Biological unit images

Molmil generated image of 2xdp
no rotation
Molmil generated image of 2xdp
rotated about x axis by 90°
Molmil generated image of 2xdp
rotated about y axis by 90°
(*)In the case of coarse surface representation, the asymmetric unit is shown as red ribbon representation.
Coordinate files for Biological unit (2xdp.pdb1.gz [87.86 KB])