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PDB: 1041 results

3LVS
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BU of 3lvs by Molmil
Crystal structure of farnesyl diphosphate synthase from rhodobacter capsulatus sb1003
Descriptor: FARNESYL DIPHOSPHATE SYNTHASE, GLYCEROL, PHOSPHATE ION
Authors:Patskovsky, Y, Toro, R, Rutter, M, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-02-22
Release date:2010-03-09
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Prediction of function for the polyprenyl transferase subgroup in the isoprenoid synthase superfamily.
Proc.Natl.Acad.Sci.USA, 110, 2013
3PWX
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BU of 3pwx by Molmil
Structure of putative flagellar hook-associated protein from Vibrio parahaemolyticus
Descriptor: MAGNESIUM ION, Putative flagellar hook-associated protein
Authors:Ramagopal, U.A, Patskovsky, Y, Toro, R, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-12-09
Release date:2011-01-19
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of putative flagellar hook-associated protein from Vibrio parahaemolyticus
To be published
3SLR
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BU of 3slr by Molmil
Crystal structure of N-terminal part of the protein BF1531 from Bacteroides fragilis containing phosphatase domain complexed with Mg.
Descriptor: MAGNESIUM ION, uncharacterized protein BF1531
Authors:Fedorov, A.A, Fedorov, E.V, Toro, R, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2011-06-24
Release date:2011-07-20
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (1.712 Å)
Cite:Crystal structure of N-terminal part of the protein BF1531 from Bacteroides fragilis containing phosphatase domain complexed with Mg.
TO BE PUBLISHED
3Q1Y
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BU of 3q1y by Molmil
Allosteric regulation by Lysine residue: A novel anion-hole formation in the ribokinase family
Descriptor: GLYCEROL, Lin2199 protein, POTASSIUM ION
Authors:Satyanarayana, L, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-12-18
Release date:2011-01-19
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Allosteric regulation by Lysine residue: A novel anion-hole formation in the ribokinase family
To be Published
2O34
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BU of 2o34 by Molmil
Crystal structure of protein DVU1097 from Desulfovibrio vulgaris Hildenborough, Pfam DUF375
Descriptor: Hypothetical protein, SODIUM ION
Authors:Malashkevich, V.N, Toro, R, Sauder, J.M, Schwinn, K.D, Thompson, D.A, Rutter, M.E, Dickey, M, Groshong, C, Bain, K.T, Adams, J.M, Reyes, C, Rooney, I, Powell, A, Boice, A, Gheyi, T, Ozyurt, S, Atwell, S, Wasserman, S.R, Emtage, S, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2006-11-30
Release date:2006-12-12
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal Structure of the Hypothetical Protein from Desulfovibrio vulgaris Hildenborough
To be Published
3MMZ
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BU of 3mmz by Molmil
CRYSTAL STRUCTURE OF putative HAD family hydrolase from Streptomyces avermitilis MA-4680
Descriptor: CALCIUM ION, CHLORIDE ION, putative HAD family hydrolase
Authors:Malashkevich, V.N, Ramagopal, U.A, Toro, R, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-04-20
Release date:2010-04-28
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Structural basis for the divergence of substrate specificity and biological function within HAD phosphatases in lipopolysaccharide and sialic acid biosynthesis.
Biochemistry, 52, 2013
3K4I
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BU of 3k4i by Molmil
CRYSTAL STRUCTURE OF uncharacterized protein PSPTO_3204 from Pseudomonas syringae pv. tomato str. DC3000
Descriptor: CHLORIDE ION, MAGNESIUM ION, uncharacterized protein
Authors:Malashkevich, V.N, Toro, R, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-10-05
Release date:2009-10-13
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:CRYSTAL STRUCTURE OF uncharacterized protein PSPTO_3204 from Pseudomonas syringae pv. tomato str. DC3000
To be Published
2NQL
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BU of 2nql by Molmil
Crystal structure of a member of the enolase superfamily from Agrobacterium tumefaciens
Descriptor: GLYCEROL, Isomerase/lactonizing enzyme, SODIUM ION, ...
Authors:Patskovsky, Y, Ramagopal, U, Toro, R, Sauder, J.M, Dickey, M, Adams, J.M, Ozyurt, S, Wasserman, S.R, Gerlt, J, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2006-10-31
Release date:2006-11-14
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of Enolase from Agrobacterium Tumefaciens C58
To be Published
3R9K
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BU of 3r9k by Molmil
Crystal structure of pyrophosphatase from bacteroides thetaiotaomicron, glu47asp mutant complexed with sulfate, a closed cap conformation
Descriptor: Putative beta-phosphoglucomutase, SULFATE ION
Authors:Patskovsky, Y, Huang, H, Toro, R, Gerlt, J.A, Burley, S.K, Dunaway-Mariano, D, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC), Enzyme Function Initiative (EFI)
Deposit date:2011-03-25
Release date:2011-04-27
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Divergence of Structure and Function in the Haloacid Dehalogenase Enzyme Superfamily: Bacteroides thetaiotaomicron BT2127 Is an Inorganic Pyrophosphatase.
Biochemistry, 50, 2011
3RAZ
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BU of 3raz by Molmil
The crystal structure of thioredoxin-related protein from Neisseria meningitidis serogroup B
Descriptor: Thioredoxin-related protein
Authors:Zhang, Z, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2011-03-28
Release date:2011-05-11
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (2 Å)
Cite:The crystal structure of thioredoxin-related protein from Neisseria meningitidis serogroup B
To be Published
2PAJ
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BU of 2paj by Molmil
Crystal structure of an amidohydrolase from an environmental sample of Sargasso sea
Descriptor: ZINC ION, putative cytosine/guanine deaminase
Authors:Agarwal, R, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-03-27
Release date:2007-04-03
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Discovery and structure determination of the orphan enzyme isoxanthopterin deaminase.
Biochemistry, 49, 2010
3MWC
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BU of 3mwc by Molmil
Crystal structure of probable o-succinylbenzoic acid synthetase from kosmotoga olearia
Descriptor: MAGNESIUM ION, Mandelate racemase/muconate lactonizing protein, PHOSPHATE ION
Authors:Patskovsky, Y, Toro, R, Dickey, M, Sauder, J.M, Gerlt, J, Almo, S.C, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-05-05
Release date:2010-05-19
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of O-Succinylbenzoic Acid Synthetase from Kosmotoga Olearia
To be Published
3QDK
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BU of 3qdk by Molmil
Structural insight on mechanism and diverse substrate selection strategy of ribulokinase
Descriptor: L-ribulose, Ribulokinase
Authors:Agarwal, R, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2011-01-18
Release date:2011-02-09
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Structural insight into mechanism and diverse substrate selection strategy of L-ribulokinase.
Proteins, 80, 2012
3OYR
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BU of 3oyr by Molmil
Crystal structure of polyprenyl synthase from Caulobacter crescentus CB15 complexed with calcium and isoprenyl diphosphate
Descriptor: CALCIUM ION, DIMETHYLALLYL DIPHOSPHATE, PYROPHOSPHATE 2-, ...
Authors:Patskovsky, Y, Toro, R, Rutter, M, Sauder, J.M, Burley, S.K, Poulter, C.D, Gerlt, J.A, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-09-23
Release date:2010-10-13
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Prediction of function for the polyprenyl transferase subgroup in the isoprenoid synthase superfamily.
Proc.Natl.Acad.Sci.USA, 110, 2013
3P41
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BU of 3p41 by Molmil
Crystal structure of polyprenyl synthetase from pseudomonas fluorescens pf-5 complexed with magnesium and isoprenyl pyrophosphate
Descriptor: CHLORIDE ION, DIMETHYLALLYL DIPHOSPHATE, GLYCEROL, ...
Authors:Patskovsky, Y, Toro, R, Sauder, J.M, Burley, S.K, Poulter, C.D, Gerlt, J.A, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-10-05
Release date:2010-10-20
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Prediction of function for the polyprenyl transferase subgroup in the isoprenoid synthase superfamily.
Proc.Natl.Acad.Sci.USA, 110, 2013
3PDE
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BU of 3pde by Molmil
Crystal structure of geranylgeranyl pyrophosphate synthase from Lactobacillus brevis atcc 367 complexed with isoprenyl diphosphate and magnesium
Descriptor: DIMETHYLALLYL DIPHOSPHATE, Farnesyl-diphosphate synthase, GLYCEROL, ...
Authors:Patskovsky, Y, Toro, R, Rutter, M, Sauder, J.M, Burley, S.K, Poulter, C.D, Gerlt, J.A, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-10-22
Release date:2010-11-17
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Prediction of function for the polyprenyl transferase subgroup in the isoprenoid synthase superfamily.
Proc.Natl.Acad.Sci.USA, 110, 2013
3GG9
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BU of 3gg9 by Molmil
CRYSTAL STRUCTURE OF putative D-3-phosphoglycerate dehydrogenase oxidoreductase from Ralstonia solanacearum
Descriptor: CHLORIDE ION, GLYCEROL, SULFATE ION, ...
Authors:Patskovsky, Y, Ramagopal, U, Toro, R, Morano, C, Freeman, J, Chang, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-02-27
Release date:2009-03-24
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of Putative D-3-Phosphoglycerate Dehydrogenase from Ralstonia Solanacearum
To be Published
3PU6
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BU of 3pu6 by Molmil
The crystal structure of an uncharacterized protein from Wolinella succinogenes
Descriptor: Uncharacterized protein
Authors:Zhang, Z, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-12-03
Release date:2011-01-19
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The crystal structure of an uncharacterized protein from Wolinella succinogenes
TO BE PUBLISHED
3PU5
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BU of 3pu5 by Molmil
The crystal structure of a putative extracellular solute-binding protein from Bordetella parapertussis
Descriptor: GLYCEROL, extracellular solute-binding protein
Authors:Zhang, Z, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-12-03
Release date:2010-12-22
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:The crystal structure of aa putative extracellular solute-binding protein from Bordetella parapertussis
To be Published
3R09
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BU of 3r09 by Molmil
Crystal structure of probable HAD family hydrolase from Pseudomonas fluorescens Pf-5 with bound Mg
Descriptor: Hydrolase, haloacid dehalogenase-like family, MAGNESIUM ION, ...
Authors:Vetting, M.W, Patskovsky, Y, Toro, R, Freeman, J, Miller, S, Sauder, J.M, Burley, S.K, Dunaway-Mariano, D, Allen, K.N, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI), New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2011-03-07
Release date:2011-04-20
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of probable HAD family hydrolase from Pseudomonas fluorescens Pf-5 with bound Mg
To be Published
2O16
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BU of 2o16 by Molmil
Crystal structure of a putative acetoin utilization protein (AcuB) from Vibrio cholerae
Descriptor: Acetoin utilization protein AcuB, putative, PHOSPHATE ION
Authors:Patskovsky, Y, Bonanno, J.B, Rutter, M, Bain, K.T, Powell, A, Slocombe, A, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2006-11-28
Release date:2006-12-12
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of a putative acetoin utilization protein (AcuB) from Vibrio cholerae
To be Published
2NWU
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BU of 2nwu by Molmil
Crystal structure of protein SSO1042 from Sulfolobus solfataricus, Pfam DUF54
Descriptor: UPF0201 protein SSO1042
Authors:Rao, K.N, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2006-11-16
Release date:2006-12-12
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:UPF201 archaeal specific family members reveal structural similarity to RNA-binding proteins but low likelihood for RNA-binding function.
Plos One, 3, 2008
3MN1
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BU of 3mn1 by Molmil
Crystal structure of probable yrbi family phosphatase from pseudomonas syringae pv.phaseolica 1448a
Descriptor: CHLORIDE ION, probable yrbi family phosphatase
Authors:Patskovsky, Y, Ramagopal, U, Toro, R, Freeman, J, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-04-20
Release date:2010-04-28
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for the divergence of substrate specificity and biological function within HAD phosphatases in lipopolysaccharide and sialic acid biosynthesis.
Biochemistry, 52, 2013
2OGF
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BU of 2ogf by Molmil
Crystal structure of protein MJ0408 from Methanococcus jannaschii, Pfam DUF372
Descriptor: 8-OXOGUANINE, GLYCEROL, Hypothetical protein MJ0408, ...
Authors:Ramagopal, U.A, Toro, R, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-01-05
Release date:2007-01-16
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Crystal structure of hypothetical protein MJ0408 from Methanococcus jannaschii
To be Published
2OGK
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BU of 2ogk by Molmil
Crystal structure of protein AF2318 from Archaeglobus fulgidus, Pfam DUF54
Descriptor: Hypothetical protein
Authors:Rao, K.N, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-01-05
Release date:2007-01-30
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (3 Å)
Cite:UPF201 archaeal specific family members reveal structural similarity to RNA-binding proteins but low likelihood for RNA-binding function.
Plos One, 3, 2008

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