Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 196 results

3PYH
DownloadVisualize
BU of 3pyh by Molmil
Bovine trypsin variant X(tripleGlu217Ile227) in complex with small molecule inhibitor
Descriptor: 3-(3-carbamimidoylphenyl)-N-(2'-sulfamoylbiphenyl-4-yl)-1,2-oxazole-4-carboxamide, CALCIUM ION, CHLORIDE ION, ...
Authors:Tziridis, A, Neumann, P, Kolenko, P, Stubbs, M.T.
Deposit date:2010-12-13
Release date:2011-12-21
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Correlating structure and ligand affinity in drug discovery: a cautionary tale involving second shell residues.
Biol.Chem., 395, 2014
3PMJ
DownloadVisualize
BU of 3pmj by Molmil
Bovine trypsin variant X(tripleIle227) in complex with small molecule inhibitor
Descriptor: CALCIUM ION, CHLORIDE ION, Cationic trypsin, ...
Authors:Tziridis, A, Neumann, P, Kolenko, P, Stubbs, M.T.
Deposit date:2010-11-17
Release date:2011-11-23
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Correlating structure and ligand affinity in drug discovery: a cautionary tale involving second shell residues.
Biol.Chem., 395, 2014
3Q00
DownloadVisualize
BU of 3q00 by Molmil
Bovine trypsin variant X(tripleGlu217Ile227) in complex with small molecule inhibitor
Descriptor: 2,5,8,11,14,17,20,23,26,29,32,35,38,41,44,47,50,53,56,59,62,65,68,71,74,77,80-HEPTACOSAOXADOOCTACONTAN-82-OL, CALCIUM ION, Cationic trypsin, ...
Authors:Tziridis, A, Neumann, P, Kolenko, P, Stubbs, M.T.
Deposit date:2010-12-15
Release date:2011-12-21
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Correlating structure and ligand affinity in drug discovery: a cautionary tale involving second shell residues.
Biol.Chem., 395, 2014
3PM3
DownloadVisualize
BU of 3pm3 by Molmil
Bovine trypsin variant X(tripleIle227) in complex with small molecule inhibitor
Descriptor: CALCIUM ION, Cationic trypsin, GLYCEROL, ...
Authors:Tziridis, A, Neumann, P, Kolenko, P, Stubbs, M.T.
Deposit date:2010-11-16
Release date:2011-12-07
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Correlating structure and ligand affinity in drug discovery: a cautionary tale involving second shell residues.
Biol.Chem., 395, 2014
3PLB
DownloadVisualize
BU of 3plb by Molmil
Bovine trypsin variant X(tripleIle227) in complex with small molecule inhibitor
Descriptor: BENZAMIDINE, CALCIUM ION, Cationic trypsin, ...
Authors:Tziridis, A, Neumann, P, Kolenko, P, Stubbs, M.T.
Deposit date:2010-11-15
Release date:2011-12-07
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.18 Å)
Cite:Correlating structure and ligand affinity in drug discovery: a cautionary tale involving second shell residues.
Biol.Chem., 395, 2014
3PLP
DownloadVisualize
BU of 3plp by Molmil
Bovine trypsin variant X(tripleIle227) in complex with small molecule inhibitor
Descriptor: 2,7-BIS-(4-AMIDINOBENZYLIDENE)-CYCLOHEPTAN-1-ONE, CALCIUM ION, Cationic trypsin, ...
Authors:Tziridis, A, Neumann, P, Braeuer, U, Kolenko, P, Stubbs, M.T.
Deposit date:2010-11-15
Release date:2011-12-07
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Correlating structure and ligand affinity in drug discovery: a cautionary tale involving second shell residues.
Biol.Chem., 395, 2014
3PLK
DownloadVisualize
BU of 3plk by Molmil
Bovine trypsin variant X(tripleIle227) in complex with small molecule inhibitor
Descriptor: CALCIUM ION, Cationic trypsin, GLYCEROL, ...
Authors:Tziridis, A, Neumann, P, Braeuer, U, Kolenko, P, Stubbs, M.T.
Deposit date:2010-11-15
Release date:2011-12-07
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Correlating structure and ligand affinity in drug discovery: a cautionary tale involving second shell residues.
Biol.Chem., 395, 2014
3PWC
DownloadVisualize
BU of 3pwc by Molmil
Bovine trypsin variant X(tripleGlu217Ile227) in complex with small molecule inhibitor
Descriptor: CALCIUM ION, Cationic trypsin, GLYCEROL, ...
Authors:Tziridis, A, Neumann, P, Kolenko, P, Stubbs, M.T.
Deposit date:2010-12-08
Release date:2011-12-21
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Correlating structure and ligand affinity in drug discovery: a cautionary tale involving second shell residues.
Biol.Chem., 395, 2014
4HZK
DownloadVisualize
BU of 4hzk by Molmil
Crystal structure of free CRM1 (crystal form 2)
Descriptor: CRM1 Nuclear transport receptor
Authors:Monecke, T, Neumann, P, Dickmanns, A, Ficner, R.
Deposit date:2012-11-15
Release date:2013-01-23
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural basis for cooperativity of CRM1 export complex formation.
Proc.Natl.Acad.Sci.USA, 110, 2013
4IA5
DownloadVisualize
BU of 4ia5 by Molmil
Hydratase from Lactobacillus acidophilus - SeMet derivative (apo LAH)
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, ...
Authors:Khoshnevis, S, Neumann, P, Ficner, R.
Deposit date:2012-12-06
Release date:2013-03-27
Last modified:2013-08-07
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Crystal structure analysis of a fatty acid double-bond hydratase from Lactobacillus acidophilus
Acta Crystallogr.,Sect.D, 69, 2013
6RM9
DownloadVisualize
BU of 6rm9 by Molmil
Crystal structure of the DEAH-box ATPase Prp2 in complex with Spp2 and ADP
Descriptor: ACETATE ION, ADENOSINE-5'-DIPHOSPHATE, DI(HYDROXYETHYL)ETHER, ...
Authors:Hamann, F, Neumann, P, Ficner, R.
Deposit date:2019-05-06
Release date:2020-02-05
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural analysis of the intrinsically disordered splicing factor Spp2 and its binding to the DEAH-box ATPase Prp2.
Proc.Natl.Acad.Sci.USA, 117, 2020
4JQ9
DownloadVisualize
BU of 4jq9 by Molmil
Dihydrolipoyl dehydrogenase of Escherichia coli pyruvate dehydrogenase complex
Descriptor: CHLORIDE ION, Dihydrolipoyl dehydrogenase, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Tietzel, M, Neumann, P, Meyer, D, Ficner, R, Tittmann, K.
Deposit date:2013-03-20
Release date:2014-04-02
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Dihydrolipoyl dehydrogenase of Escherichia coli pyruvate dehydrogenase complex
TO BE PUBLISHED
4IA6
DownloadVisualize
BU of 4ia6 by Molmil
Hydratase from lactobacillus acidophilus in a ligand bound form (LA LAH)
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ...
Authors:Khoshnevis, S, Neumann, P, Ficner, R.
Deposit date:2012-12-06
Release date:2013-03-27
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure analysis of a fatty acid double-bond hydratase from Lactobacillus acidophilus
Acta Crystallogr.,Sect.D, 69, 2013
6RMB
DownloadVisualize
BU of 6rmb by Molmil
Crystal structure of the DEAH-box ATPase Prp2 in complex with Spp2 and ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Putative mRNA splicing factor, ...
Authors:Hamann, F, Neumann, P, Ficner, R.
Deposit date:2019-05-06
Release date:2020-02-05
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural analysis of the intrinsically disordered splicing factor Spp2 and its binding to the DEAH-box ATPase Prp2.
Proc.Natl.Acad.Sci.USA, 117, 2020
6RGO
DownloadVisualize
BU of 6rgo by Molmil
Complex of KlAtg21 with coiled-coil of AgAtg16
Descriptor: Autophagy protein 16, Autophagy-related protein 21
Authors:Thumm, M, Neumann, P.
Deposit date:2019-04-17
Release date:2020-05-13
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.701 Å)
Cite:Atg21 organizes Atg8 lipidation at the contact of the vacuole with the phagophore.
Autophagy, 2020
6RM8
DownloadVisualize
BU of 6rm8 by Molmil
Crystal structure of the DEAH-box ATPase Prp2 in complex with Spp2 and ADP
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, ...
Authors:Hamann, F, Neumann, P, Ficner, R.
Deposit date:2019-05-06
Release date:2020-02-05
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural analysis of the intrinsically disordered splicing factor Spp2 and its binding to the DEAH-box ATPase Prp2.
Proc.Natl.Acad.Sci.USA, 117, 2020
6RMC
DownloadVisualize
BU of 6rmc by Molmil
Crystal structure of the DEAH-box ATPase Prp2 in complex with Spp2 and ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Putative mRNA splicing factor, ...
Authors:Hamann, F, Neumann, P, Schmitt, A, Ficner, R.
Deposit date:2019-05-06
Release date:2020-02-05
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural analysis of the intrinsically disordered splicing factor Spp2 and its binding to the DEAH-box ATPase Prp2.
Proc.Natl.Acad.Sci.USA, 117, 2020
6RMA
DownloadVisualize
BU of 6rma by Molmil
Crystal structure of the DEAH-box ATPase Prp2 in complex with Spp2 and ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, GLYCEROL, ...
Authors:Hamann, F, Neumann, P, Ficner, R.
Deposit date:2019-05-06
Release date:2020-02-05
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural analysis of the intrinsically disordered splicing factor Spp2 and its binding to the DEAH-box ATPase Prp2.
Proc.Natl.Acad.Sci.USA, 117, 2020
4FGV
DownloadVisualize
BU of 4fgv by Molmil
Crystal structure of free CRM1 (crystal form 1)
Descriptor: Chromosome region maintenance 1 (CRM1) or Exportin 1 (Xpo1)
Authors:Monecke, T, Neumann, P, Dickmanns, A, Ficner, R.
Deposit date:2012-06-05
Release date:2013-01-23
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.941 Å)
Cite:Structural basis for cooperativity of CRM1 export complex formation.
Proc.Natl.Acad.Sci.USA, 110, 2013
4FEE
DownloadVisualize
BU of 4fee by Molmil
High-resolution structure of pyruvate oxidase in complex with reaction intermediate 2-hydroxyethyl-thiamin diphosphate carbanion-enamine, crystal B
Descriptor: 2-[(2E)-3-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-2-(1-HYDROXYETHYLIDENE)-4-METHYL-2,3-DIHYDRO-1,3-THIAZOL-5-YL]ETHYL TRIHYDROGEN DIPHOSPHATE, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, ...
Authors:Meyer, D, Neumann, P, Koers, E, Sjuts, H, Luedtke, S, Sheldrick, G.M, Ficner, R, Tittmann, K.
Deposit date:2012-05-30
Release date:2012-06-20
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.13 Å)
Cite:Unexpected tautomeric equilibria of the carbanion-enamine intermediate in pyruvate oxidase highlight unrecognized chemical versatility of thiamin.
Proc.Natl.Acad.Sci.USA, 109, 2012
4FEG
DownloadVisualize
BU of 4feg by Molmil
High-resolution structure of pyruvate oxidase in complex with reaction intermediate 2-hydroxyethyl-thiamin diphosphate carbanion-enamine, crystal A
Descriptor: 2-[(2E)-3-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-2-(1-HYDROXYETHYLIDENE)-4-METHYL-2,3-DIHYDRO-1,3-THIAZOL-5-YL]ETHYL TRIHYDROGEN DIPHOSPHATE, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, ...
Authors:Meyer, D, Neumann, P, Koers, E, Sjuts, H, Luedtke, S, Sheldrick, G.M, Ficner, R, Tittmann, K.
Deposit date:2012-05-30
Release date:2012-06-20
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.09 Å)
Cite:Unexpected tautomeric equilibria of the carbanion-enamine intermediate in pyruvate oxidase highlight unrecognized chemical versatility of thiamin.
Proc.Natl.Acad.Sci.USA, 109, 2012
3NS6
DownloadVisualize
BU of 3ns6 by Molmil
Crystal structure of hte RNA recognition motif of yeast eIF3b residues 76-170
Descriptor: Eukaryotic translation initiation factor 3 subunit B, SULFATE ION
Authors:Khoshnevis, S, Neumann, P, Ficner, R.
Deposit date:2010-07-01
Release date:2010-10-06
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Crystal structure of the RNA recognition motif of yeast translation initiation factor eIF3b reveals differences to human eIF3b.
Plos One, 5, 2010
3NS5
DownloadVisualize
BU of 3ns5 by Molmil
Crystal structure of the RNA recognition motif of yeast eIF3b residues 76-161
Descriptor: Eukaryotic translation initiation factor 3 subunit B
Authors:Khoshnevis, S, Neumann, P, Ficner, R.
Deposit date:2010-07-01
Release date:2010-10-06
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.598 Å)
Cite:Crystal structure of the RNA recognition motif of yeast translation initiation factor eIF3b reveals differences to human eIF3b.
Plos One, 5, 2010
4XRI
DownloadVisualize
BU of 4xri by Molmil
Crystal Structure of Importin Beta in an Ammonium Sulfate Condition
Descriptor: GLYCEROL, Putative uncharacterized protein, SULFATE ION
Authors:Tauchert, M.J, Neumann, P, Ficner, R, Dickmanns, A.
Deposit date:2015-01-21
Release date:2016-01-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Impact of the crystallization condition on importin-beta conformation.
Acta Crystallogr D Struct Biol, 72, 2016
4XRK
DownloadVisualize
BU of 4xrk by Molmil
Crystal Structure of Importin Beta in a Polyethylene Glycol Condition
Descriptor: Importin Beta
Authors:Tauchert, M.J, Neumann, P, Ficner, R, Dickmanns, A.
Deposit date:2015-01-21
Release date:2016-01-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:Impact of the crystallization condition on importin-beta conformation.
Acta Crystallogr D Struct Biol, 72, 2016

221716

PDB entries from 2024-06-26

PDB statisticsPDBj update infoContact PDBjnumon