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PDB: 10 件

5H7S
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BU of 5h7s by Molmil
Structural basis of the flanking zinc-finger motifs crucial for the E3 ligase activity of the LNX1 RING domain
分子名称: E3 ubiquitin-protein ligase LNX, Ubiquitin-conjugating enzyme E2 N, Ubiquitin-like 1, ...
著者Nayak, D, Sivaraman, J.
登録日2016-11-21
公開日2017-11-29
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.49 Å)
主引用文献Structure of LNX1:Ubc13~Ubiquitin Complex Reveals the Role of Additional Motifs for the E3 Ligase Activity of LNX1.
J. Mol. Biol., 430, 2018
5H7R
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BU of 5h7r by Molmil
Structural basis of the flanking zinc-finger motifs crucial for the E3 ligase activity of the LNX1 RING domain
分子名称: E3 ubiquitin-protein ligase LNX, ZINC ION
著者Nayak, D, Sivaraman, J.
登録日2016-11-21
公開日2017-11-29
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure of LNX1:Ubc13~Ubiquitin Complex Reveals the Role of Additional Motifs for the E3 Ligase Activity of LNX1.
J. Mol. Biol., 430, 2018
8FY2
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BU of 8fy2 by Molmil
E3:PROTAC:target ternary complex structure (VCB/WH244/BCL-2)
分子名称: Apoptosis regulator Bcl-2, Elongin-B, Elongin-C, ...
著者Nayak, D, Lv, D, Yuan, Y, Zhang, P, Hu, W, Ruben, E, Lv, Z, Sung, P, Hromas, R, Zheng, G, Zhou, D, Olsen, S.K.
登録日2023-01-25
公開日2024-04-10
実験手法X-RAY DIFFRACTION (2.98 Å)
主引用文献Development and crystal structures of a potent second-generation dual degrader of BCL-2 and BCL-xL.
Nat Commun, 15, 2024
8FY1
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E3:PROTAC:target ternary complex structure (VCB/753b/BCL-2)
分子名称: Apoptosis regulator Bcl-2, Elongin-B, Elongin-C, ...
著者Nayak, D, Lv, D, Yuan, Y, Zhang, P, Hu, W, Lv, Z, Sung, P, Hromas, R, Zheng, G, Zhou, D, Olsen, S.K.
登録日2023-01-25
公開日2024-04-10
実験手法X-RAY DIFFRACTION (2.56 Å)
主引用文献Development and crystal structures of a potent second-generation dual degrader of BCL-2 and BCL-xL.
Nat Commun, 15, 2024
6JX5
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BU of 6jx5 by Molmil
Hect domain of AREL1
分子名称: Apoptosis-resistant E3 ubiquitin protein ligase 1
著者Sivaraman, J, Singh, S, Ng, J, Nayak, D.
登録日2019-04-22
公開日2019-12-04
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.402 Å)
主引用文献Structural insights into a HECT-type E3 ligase AREL1 and its ubiquitination activitiesin vitro.
J.Biol.Chem., 294, 2019
5DIN
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BU of 5din by Molmil
Structural Basis for the Indispensable Role of a Unique Zinc Finger Motif in LNX2 Ubiquitination
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Ligand of Numb protein X 2, ZINC ION
著者Sivaraman, J, Nayak, D.
登録日2015-09-01
公開日2015-10-14
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.864 Å)
主引用文献Structural basis for the indispensable role of a unique zinc finger motif in LNX2 ubiquitination.
Oncotarget, 6, 2015
8FY0
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BU of 8fy0 by Molmil
E3:PROTAC:target ternary complex structure (VCB/753b/BCL-xL)
分子名称: Bcl-2-like protein 1, CACODYLIC ACID, Elongin-B, ...
著者Olsen, S.K, Nayak, D, Lv, D, Yuan, Y, Zhang, P, Hu, W, Lv, Z, Sung, P, Hromas, R, Zheng, G, Zhou, D.
登録日2023-01-25
公開日2024-04-10
実験手法X-RAY DIFFRACTION (2.94 Å)
主引用文献Development and crystal structures of a potent second-generation dual degrader of BCL-2 and BCL-xL.
Nat Commun, 15, 2024
6JX6
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BU of 6jx6 by Molmil
Tetrameric form of Smac
分子名称: Diablo homolog, mitochondrial
著者Sivaraman, J, Singh, S, Ng, J, Nayak, D.
登録日2019-04-22
公開日2019-12-04
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.805 Å)
主引用文献Structural insights into a HECT-type E3 ligase AREL1 and its ubiquitination activitiesin vitro.
J.Biol.Chem., 294, 2019
8GF5
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BU of 8gf5 by Molmil
McrD binds asymmetrically to methyl-coenzyme M reductase improving active site accessibility during assembly
分子名称: 1-THIOETHANESULFONIC ACID, Coenzyme B, FACTOR 430, ...
著者Joiner, A.M.N, Chadwick, G.L, Nayak, D.D.
登録日2023-03-07
公開日2023-06-28
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献McrD binds asymmetrically to methyl-coenzyme M reductase improving active-site accessibility during assembly.
Proc.Natl.Acad.Sci.USA, 120, 2023
8GF6
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BU of 8gf6 by Molmil
Apo-apo MCR assembly intermediate
分子名称: Methyl coenzyme M reductase, subunit D, Methyl-coenzyme M reductase subunit alpha, ...
著者Joiner, A.M.N, Chadwick, G.L, Nayak, D.D.
登録日2023-03-07
公開日2023-06-28
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献McrD binds asymmetrically to methyl-coenzyme M reductase improving active-site accessibility during assembly.
Proc.Natl.Acad.Sci.USA, 120, 2023

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件を2024-05-15に公開中

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