5AYU
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![BU of 5ayu by Molmil](/molmil-images/mine/5ayu) | Crystal structure of HyHEL-10 Fv | 分子名称: | GLYCEROL, Ig VH,anti-lysozyme, lysozyme binding Ig kappa chain V23-J2 region | 著者 | Nakanishi, T, Tsumoto, K, Yokota, A, Kondo, H, Kumagai, I. | 登録日 | 2015-09-04 | 公開日 | 2016-09-07 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | Crystal structure of HyHEL-10 Fv To Be Published
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1VBH
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![BU of 1vbh by Molmil](/molmil-images/mine/1vbh) | Pyruvate Phosphate Dikinase with bound Mg-PEP from Maize | 分子名称: | MAGNESIUM ION, PHOSPHOENOLPYRUVATE, SULFATE ION, ... | 著者 | Nakanishi, T, Nakatsu, T, Matsuoka, M, Sakata, K, Kato, H, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2004-02-26 | 公開日 | 2005-03-08 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | 主引用文献 | Crystal structures of pyruvate phosphate dikinase from maize revealed an alternative conformation in the swiveling-domain motion Biochemistry, 44, 2005
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1VBG
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![BU of 1vbg by Molmil](/molmil-images/mine/1vbg) | Pyruvate Phosphate Dikinase from Maize | 分子名称: | MAGNESIUM ION, SULFATE ION, pyruvate,orthophosphate dikinase | 著者 | Nakanishi, T, Nakatsu, T, Matsuoka, M, Sakata, K, Kato, H, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2004-02-26 | 公開日 | 2005-03-08 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | 主引用文献 | Crystal structures of pyruvate phosphate dikinase from maize revealed an alternative conformation in the swiveling-domain motion Biochemistry, 44, 2005
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1WFZ
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![BU of 1wfz by Molmil](/molmil-images/mine/1wfz) | Solution structure of Iron-sulfur cluster protein U (IscU) | 分子名称: | ZINC ION, nitrogen fixation cluster-like | 著者 | Nakanishi, T, Tomizawa, T, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2004-05-27 | 公開日 | 2004-11-27 | 最終更新日 | 2024-05-29 | 実験手法 | SOLUTION NMR | 主引用文献 | Solution structure of Iron-sulfur cluster protein U (IscU) To be Published
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1V61
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![BU of 1v61 by Molmil](/molmil-images/mine/1v61) | Solution Structure of the Pleckstrin Homology Domain of alpha-Pix | 分子名称: | Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6 | 著者 | Nakanishi, T, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2003-11-26 | 公開日 | 2004-05-26 | 最終更新日 | 2023-12-27 | 実験手法 | SOLUTION NMR | 主引用文献 | Solution Structure of the Pleckstrin Homology Domain of alpha-Pix To be Published
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1WGE
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![BU of 1wge by Molmil](/molmil-images/mine/1wge) | Solution structure of the mouse DESR1 | 分子名称: | Hypothetical protein 2610018L09Rik, ZINC ION | 著者 | Nakanishi, T, Tochio, N, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2004-05-28 | 公開日 | 2005-08-23 | 最終更新日 | 2024-05-29 | 実験手法 | SOLUTION NMR | 主引用文献 | Solution structure of the mouse DESR1 To be Published
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1WFY
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![BU of 1wfy by Molmil](/molmil-images/mine/1wfy) | Solution structure of the Ras-binding domain of mouse RGS14 | 分子名称: | regulator of G-protein signaling 14; rap1/rap2 interacting protein | 著者 | Nakanishi, T, Tochio, N, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2004-05-27 | 公開日 | 2004-11-27 | 最終更新日 | 2024-05-29 | 実験手法 | SOLUTION NMR | 主引用文献 | Solution structure of the Ras-binding domain of mouse RGS14 To be Published
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1WGD
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![BU of 1wgd by Molmil](/molmil-images/mine/1wgd) | Solution structure of the Ubl-domain of Herp | 分子名称: | Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein | 著者 | Nakanishi, T, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2004-05-28 | 公開日 | 2004-11-28 | 最終更新日 | 2024-05-29 | 実験手法 | SOLUTION NMR | 主引用文献 | Solution structure of the Ubl-domain of Herp To be Published
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1WH0
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![BU of 1wh0 by Molmil](/molmil-images/mine/1wh0) | Solution structure of the CS domain of human USP19 | 分子名称: | Ubiquitin carboxyl-terminal hydrolase 19 | 著者 | Nakanishi, T, Tochio, N, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2004-05-28 | 公開日 | 2004-11-28 | 最終更新日 | 2024-05-29 | 実験手法 | SOLUTION NMR | 主引用文献 | Solution structure of the CS domain of human USP19 To be Published
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1WHD
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![BU of 1whd by Molmil](/molmil-images/mine/1whd) | Solution structure of the PDZ domain of RGS3 | 分子名称: | regulator of G-protein signaling 3 | 著者 | Nakanishi, T, Nemoto, N, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2004-05-28 | 公開日 | 2004-11-28 | 最終更新日 | 2024-05-29 | 実験手法 | SOLUTION NMR | 主引用文献 | Solution structure of the PDZ domain of RGS3 To be Published
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2EKS
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![BU of 2eks by Molmil](/molmil-images/mine/2eks) | Crystal structure of humanized HyHEL-10 FV-HEN lysozyme complex | 分子名称: | ANTI-LYSOZYME ANTIBODY FV REGION, Lysozyme C | 著者 | Nakanishi, T, Tsumoto, K, Yokota, A, Kondo, H, Kumagai, I. | 登録日 | 2007-03-24 | 公開日 | 2008-03-25 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Critical contribution of VH-VL interaction to reshaping of an antibody: the case of humanization of anti-lysozyme antibody, HyHEL-10 Protein Sci., 17, 2008
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2EIZ
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![BU of 2eiz by Molmil](/molmil-images/mine/2eiz) | Crystal structure of humanized HYHEL-10 fv mutant(HW47Y)-hen lysozyme complex | 分子名称: | ANTI-LYSOZYME ANTIBODY FV REGION, Lysozyme C | 著者 | Nakanishi, T, Tsumoto, K, Yokota, A, Kondo, H, Kumagai, I. | 登録日 | 2007-03-14 | 公開日 | 2008-03-18 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | 主引用文献 | Critical contribution of VH-VL interaction to reshaping of an antibody: the case of humanization of anti-lysozyme antibody, HyHEL-10 Protein Sci., 17, 2008
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3A6R
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![BU of 3a6r by Molmil](/molmil-images/mine/3a6r) | E13Q mutant of FMN-binding protein from Desulfovibrio vulgaris (Miyazaki F) | 分子名称: | CHLORIDE ION, FLAVIN MONONUCLEOTIDE, FMN-binding protein | 著者 | Nakanishi, T, Haruyama, Y, Inoue, H, Kitamura, M. | 登録日 | 2009-09-08 | 公開日 | 2010-09-01 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.2 Å) | 主引用文献 | Effects of the disappearance of one charge on ultrafast fluorescence dynamics of the FMN binding protein. J.Phys.Chem.B, 114, 2010
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3A6Q
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![BU of 3a6q by Molmil](/molmil-images/mine/3a6q) | E13T mutant of FMN-binding protein from Desulfovibrio vulgaris (Miyazaki F) | 分子名称: | CHLORIDE ION, FLAVIN MONONUCLEOTIDE, FMN-binding protein | 著者 | Nakanishi, T, Haruyama, Y, Inoue, H, Kitamura, M. | 登録日 | 2009-09-08 | 公開日 | 2010-09-01 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.4 Å) | 主引用文献 | Effects of the disappearance of one charge on ultrafast fluorescence dynamics of the FMN binding protein. J.Phys.Chem.B, 114, 2010
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2YSS
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![BU of 2yss by Molmil](/molmil-images/mine/2yss) | Crystal structure of Humanized HYHEL-10 FV mutant(HQ39KW47Y)-HEN lysozyme complex | 分子名称: | ANTI-LYSOZYME ANTIBODY FV REGION, Lysozyme C | 著者 | Nakanishi, T, Tsumoto, K, Yokota, A, Kondo, H, Kumagai, I. | 登録日 | 2007-04-03 | 公開日 | 2008-04-08 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | 主引用文献 | Critical contribution of VH-VL interaction to reshaping of an antibody: the case of humanization of anti-lysozyme antibody, HyHEL-10 Protein Sci., 17, 2008
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2Z4Q
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![BU of 2z4q by Molmil](/molmil-images/mine/2z4q) | Crystal structure of a murine antibody FAB 528 | 分子名称: | CADMIUM ION, CHLORIDE ION, anti egfr antibody fab, ... | 著者 | Nakanishi, T, Tsumoto, K, Asano, R, Kondo, H, Kumagai, I. | 登録日 | 2007-06-22 | 公開日 | 2007-10-30 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | 主引用文献 | Thermodynamic consequences of mutations in vernier zone residues of a humanized anti-human epidermal growth factor receptor murine antibody, 528 J.Biol.Chem., 283, 2008
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2RQH
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![BU of 2rqh by Molmil](/molmil-images/mine/2rqh) | Structure of GSPT1/ERF3A-PABC | 分子名称: | G1 to S phase transition 1, Polyadenylate-binding protein 1 | 著者 | Osawa, M, Nakanishi, T, Hosoda, N, Uchida, S, Hoshino, T, Katada, I, Shimada, I. | 登録日 | 2009-05-08 | 公開日 | 2010-05-26 | 最終更新日 | 2024-05-01 | 実験手法 | SOLUTION NMR | 主引用文献 | Eukaryotic Translation Termination Factor Gspt/Erf3 Recognizes Pabp with Chemical Exchange Using Two Overlapping Motifs To be Published
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2RQG
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![BU of 2rqg by Molmil](/molmil-images/mine/2rqg) | Structure of GSPT1/ERF3A-PABC | 分子名称: | G1 to S phase transition 1, Polyadenylate-binding protein 1 | 著者 | Osawa, M, Nakanishi, T, Hosoda, N, Uchida, S, Hoshino, T, Katada, I, Shimada, I. | 登録日 | 2009-05-08 | 公開日 | 2010-05-26 | 最終更新日 | 2024-05-15 | 実験手法 | SOLUTION NMR | 主引用文献 | Eukaryotic Translation Termination Factor Gspt/Erf3 Recognizes Pabp with Chemical Exchange Using Two Overlapping Motifs To be Published
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5B3L
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![BU of 5b3l by Molmil](/molmil-images/mine/5b3l) | |
5B3K
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![BU of 5b3k by Molmil](/molmil-images/mine/5b3k) | |
5XED
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![BU of 5xed by Molmil](/molmil-images/mine/5xed) | Heterodimer constructed from M61A PA cyt c551-HT cyt c552 and HT cyt c552-PA cyt c551 chimeric proteins | 分子名称: | Cytochrome c-551,Cytochrome c-552, Cytochrome c-552,Cytochrome c-551, HEME C | 著者 | Zhang, M, Nakanishi, T, Yamanaka, M, Nagao, S, Yanagisawa, S, Shomura, Y, Shibata, N, Ogura, T, Higuchi, Y, Hirota, S. | 登録日 | 2017-04-04 | 公開日 | 2017-08-09 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (1.55 Å) | 主引用文献 | Rational Design of Domain-Swapping-Based c-Type Cytochrome Heterodimers by Using Chimeric Proteins. Chembiochem, 18, 2017
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7EG5
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![BU of 7eg5 by Molmil](/molmil-images/mine/7eg5) | |
5XEC
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![BU of 5xec by Molmil](/molmil-images/mine/5xec) | Heterodimer constructed from PA cyt c551-HT cyt c552 and HT cyt c552-PA cyt c551 chimeric proteins | 分子名称: | Cytochrome c-551,Cytochrome c-552, Cytochrome c-552,Cytochrome c-551, HEME C | 著者 | Zhang, M, Nakanishi, T, Yamanaka, M, Nagao, S, Yanagisawa, S, Shomura, Y, Shibata, N, Ogura, T, Higuchi, Y, Hirota, S. | 登録日 | 2017-04-04 | 公開日 | 2017-08-09 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (1.1 Å) | 主引用文献 | Rational Design of Domain-Swapping-Based c-Type Cytochrome Heterodimers by Using Chimeric Proteins. Chembiochem, 18, 2017
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1WJI
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![BU of 1wji by Molmil](/molmil-images/mine/1wji) | Solution Structure of the UBA Domain of Human Tudor Domain Containing Protein 3 | 分子名称: | Tudor domain containing protein 3 | 著者 | Kamatari, Y.O, Tochio, N, Nakanishi, T, Miyamoto, K, Li, H, Kobayashi, N, Tomizawa, T, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2004-05-29 | 公開日 | 2004-11-29 | 最終更新日 | 2024-05-29 | 実験手法 | SOLUTION NMR | 主引用文献 | Solution Structure of the UBA Domain of Human Tudor Domain Containing Protein 3 To be Published
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3WJ4
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![BU of 3wj4 by Molmil](/molmil-images/mine/3wj4) | Crystal structure of PPARgamma ligand binding domain in complex with tributyltin | 分子名称: | Peroxisome proliferator-activated receptor gamma, tributylstannanyl | 著者 | Harada, S, Hiromori, Y, Fukakusa, S, Kawahara, K, Nakamura, S, Noda, M, Uchiyama, S, Fukui, K, Nishikawa, J, Nagase, H, Kobayashi, Y, Ohkubo, T, Yoshida, T, Nakanishi, T. | 登録日 | 2013-10-04 | 公開日 | 2014-10-15 | 最終更新日 | 2024-03-20 | 実験手法 | X-RAY DIFFRACTION (1.95 Å) | 主引用文献 | Structural basis for PPARgamma transactivation by endocrine disrupting organotin compounds To be Published
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