Loading
PDBj
English日本語简体中文繁體中文한국어
✖
ﾒﾆｭｰPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 45 件
6KS1
DownloadVisualize
BU of 6ks1 by Molmil
Crystal structure of the human adiponectin receptor 2
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (2S)-3-{[(R)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-2-hydroxypropyl hexadecanoate, ...
著者Tanabe, H, Fujii, Y, Nakamura, Y, Hosaka, T, Okada-Iwabu, M, Iwabu, M, Kimura-Someya, T, Shirouzu, M, Yamauchi, T, Kadowaki, T, Yokoyama, S.
登録日2019-08-22
公開日2020-08-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Human adiponectin receptor AdipoR1 assumes closed and open structures.
Commun Biol, 3, 2020
1IYN
DownloadVisualize
BU of 1iyn by Molmil
Crystal structure of chloroplastic ascorbate peroxidase from tobacco plants and structural insights for its instability
分子名称: Chloroplastic ascorbate peroxidase, PROTOPORPHYRIN IX CONTAINING FE, SODIUM ION
著者Wada, K, Tada, T, Nakamura, Y.
登録日2002-09-03
公開日2003-09-03
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structure of chloroplastic ascorbate peroxidase from tobacco plants and structural insights into its instability
J.BIOCHEM.(TOKYO), 134, 2003
3AGV
DownloadVisualize
BU of 3agv by Molmil
Crystal structure of a human IgG-aptamer complex
分子名称: 5'-R(*GP*GP*AP*GP*GP*(UFT)P*GP*(CFZ)P*(UFT)P*(CFZ)P*(CFZ)P*GP*AP*AP*A*GP*GP*AP*AP*(CFZ)P*(UFT)P*(CFZ)P*(CFZ)P*A)-3', CALCIUM ION, Ig gamma-1 chain C region, ...
著者Nomura, Y, Sugiyama, S, Sakamoto, T, Miyakawa, S, Adachi, H, Takano, K, Murakami, S, Inoue, T, Mori, Y, Nakamura, Y, Matsumura, H.
登録日2010-04-08
公開日2010-11-10
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Conformational plasticity of RNA for target recognition as revealed by the 2.15 A crystal structure of a human IgG-aptamer complex
Nucleic Acids Res., 38, 2010
2YYV
DownloadVisualize
BU of 2yyv by Molmil
Crystal structure of uncharacterized conserved protein from Thermotoga maritima
分子名称: Probable 2-phosphosulfolactate phosphatase
著者Nakagawa, N, Nakamura, Y, Bessho, Y, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-05-02
公開日2007-11-06
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Crystal structure of uncharacterized conserved protein from Thermotoga maritima
To be Published
2YYU
DownloadVisualize
BU of 2yyu by Molmil
Crystal structure of uncharacterized conserved protein from Geobacillus kaustophilus
分子名称: CYTIDINE-5'-MONOPHOSPHATE, Orotidine 5'-phosphate decarboxylase
著者Kanagawa, M, Baba, S, Nakamura, Y, Bessho, Y, Kuramitsu, S, Yokoyama, S, Kawai, G, Sampei, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-05-02
公開日2007-11-06
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of uncharacterized conserved protein from Geobacillus kaustophilus
To be Published
2YYT
DownloadVisualize
BU of 2yyt by Molmil
Crystal structure of uncharacterized conserved protein from Geobacillus kaustophilus
分子名称: Orotidine 5'-phosphate decarboxylase
著者Kanagawa, M, Baba, S, Nakamura, Y, Bessho, Y, Kuramitsu, S, Yokoyama, S, Kawai, G, Sampei, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-05-02
公開日2007-11-06
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of uncharacterized conserved protein from Geobacillus kaustophilus
To be Published
2YZO
DownloadVisualize
BU of 2yzo by Molmil
Crystal structure of uncharacterized conserved protein from Thermotoga maritima
分子名称: D-MALATE, Probable 2-phosphosulfolactate phosphatase
著者Nakagawa, N, Nakamura, Y, Bessho, Y, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-05-06
公開日2007-11-06
最終更新日2012-02-15
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystal structure of uncharacterized conserved protein from Thermotoga maritima
To be Published
2YRN
DownloadVisualize
BU of 2yrn by Molmil
Solution structure of the CH domain from Human Neuron navigator 2
分子名称: Neuron navigator 2 isoform 4
著者Tomizawa, T, Tochio, N, Koshiba, S, Inoue, M, Nakamura, Y, Furukawa, Y, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-02
公開日2008-02-12
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the CH domain from Human Neuron navigator 2
To be Published
1EH1
DownloadVisualize
BU of 1eh1 by Molmil
RIBOSOME RECYCLING FACTOR FROM THERMUS THERMOPHILUS
分子名称: RIBOSOME RECYCLING FACTOR
著者Toyoda, T, Tin, O.F, Ito, K, Fujiwara, T, Kumasaka, T, Yamamoto, M, Garber, M.B, Nakamura, Y.
登録日2000-02-18
公開日2000-11-15
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure combined with genetic analysis of the Thermus thermophilus ribosome recycling factor shows that a flexible hinge may act as a functional switch.
RNA, 6, 2000
3AQA
DownloadVisualize
BU of 3aqa by Molmil
Crystal structure of the human BRD2 BD1 bromodomain in complex with a BRD2-interactive compound, BIC1
分子名称: 1-[2-(1H-benzimidazol-2-ylsulfanyl)ethyl]-3-methyl-1,3-dihydro-2H-benzimidazole-2-thione, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Bromodomain-containing protein 2
著者Umehara, T, Nakamura, Y, Terada, T, Shirouzu, M, Padmanabhan, B, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2010-10-27
公開日2011-05-18
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Real-Time Imaging of Histone H4K12-Specific Acetylation Determines the Modes of Action of Histone Deacetylase and Bromodomain Inhibitors
Chem.Biol., 18, 2011
1X2J
DownloadVisualize
BU of 1x2j by Molmil
Structural basis for the defects of human lung cancer somatic mutations in the repression activity of Keap1 on Nrf2
分子名称: Kelch-like ECH-associated protein 1, SULFATE ION
著者Padmanabhan, B, Tong, K.I, Nakamura, Y, Ohta, T, Scharlock, M, Kobayashi, A, Ohtsuji, M, Kang, M.-I, Yamamoto, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-04-25
公開日2006-03-07
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural basis for defects of keap1 activity provoked by its point mutations in lung cancer
Mol.Cell, 21, 2006
1X2R
DownloadVisualize
BU of 1x2r by Molmil
Structural basis for the defects of human lung cancer somatic mutations in the repression activity of Keap1 on Nrf2
分子名称: Kelch-like ECH-associated protein 1, Nuclear factor erythroid 2 related factor 2, SULFATE ION
著者Padmanabhan, B, Tong, K.I, Nakamura, Y, Ohta, T, Scharlock, M, Kobayashi, A, Ohtsuji, M, Kang, M.-I, Yamamoto, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-04-26
公開日2006-03-07
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural basis for defects of keap1 activity provoked by its point mutations in lung cancer
Mol.Cell, 21, 2006
2ZKE
DownloadVisualize
BU of 2zke by Molmil
Crystal structure of the SRA domain of mouse Np95 in complex with hemi-methylated CpG DNA
分子名称: DNA (5'-D(*DCP*DTP*DAP*DCP*DCP*DGP*DGP*DAP*DTP*DTP*DGP*DC)-3'), DNA (5'-D(*DGP*DCP*DAP*DAP*DTP*DCP*(5CM)P*DGP*DGP*DTP*DAP*DG)-3'), E3 ubiquitin-protein ligase UHRF1
著者Arita, K, Ariyoshi, M, Tochio, H, Nakamura, Y, Shirakawa, M.
登録日2008-03-19
公開日2008-09-09
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Recognition of hemi-methylated DNA by the SRA protein UHRF1 by a base-flipping mechanism
Nature, 455, 2008
2ZKD
DownloadVisualize
BU of 2zkd by Molmil
Crystal structure of the SRA domain of mouse Np95 in complex with hemi-methylated CpG DNA
分子名称: 1,2-ETHANEDIOL, ACETATE ION, DNA (5'-D(*DCP*DTP*DAP*DCP*DCP*DGP*DGP*DAP*DTP*DTP*DGP*DC)-3'), ...
著者Arita, K, Ariyoshi, M, Tochio, H, Nakamura, Y, Shirakawa, M.
登録日2008-03-19
公開日2008-09-09
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Recognition of hemi-methylated DNA by the SRA protein UHRF1 by a base-flipping mechanism
Nature, 455, 2008
1XWP
DownloadVisualize
BU of 1xwp by Molmil
Solution structure of AUCGCA loop
分子名称: 5'-R(*GP*GP*AP*GP*AP*UP*CP*GP*CP*AP*CP*UP*CP*CP*A)-3'
著者Sakamoto, T, Oguro, A, Kawai, G, Ohtsu, T, Nakamura, Y.
登録日2004-11-02
公開日2005-02-15
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献NMR structures of double loops of an RNA aptamer against mammalian initiation factor 4A
Nucleic Acids Res., 33, 2005
2ZKF
DownloadVisualize
BU of 2zkf by Molmil
Crystal structure of the SRA domain of mouse Np95 in complex with hemi-methylated CpG DNA
分子名称: DNA (5'-D(*DCP*DTP*DAP*DTP*DCP*(5CM)P*DGP*DGP*DTP*DGP*DA)-3'), DNA (5'-D(P*DCP*DAP*DCP*DCP*DGP*DGP*DAP*DTP*DAP*DGP*DA)-3'), E3 ubiquitin-protein ligase UHRF1
著者Arita, K, Ariyoshi, M, Tochio, H, Nakamura, Y, Shirakawa, M.
登録日2008-03-19
公開日2008-09-09
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Recognition of hemi-methylated DNA by the SRA protein UHRF1 by a base-flipping mechanism
Nature, 455, 2008
1XWU
DownloadVisualize
BU of 1xwu by Molmil
Solution structure of ACAUAGA loop
分子名称: 5'-R(*CP*GP*AP*AP*AP*CP*AP*UP*AP*GP*AP*UP*UP*CP*GP*A)-3'
著者Sakamoto, T, Oguro, A, Kawai, G, Ohtsu, T, Nakamura, Y.
登録日2004-11-02
公開日2005-02-15
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献NMR structures of double loops of an RNA aptamer against mammalian initiation factor 4A
Nucleic Acids Res., 33, 2005
2D2I
DownloadVisualize
BU of 2d2i by Molmil
Crystal Structure of NADP-Dependent Glyceraldehyde-3-Phosphate Dehydrogenase from Synechococcus Sp. complexed with Nadp+
分子名称: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, SULFATE ION, glyceraldehyde 3-phosphate dehydrogenase
著者Kitatani, T, Nakamura, Y, Wada, K, Kinoshita, T, Tamoi, M, Shigeoka, S, Tada, T.
登録日2005-09-09
公開日2006-07-11
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure of NADP-dependent glyceraldehyde-3-phosphate dehydrogenase from Synechococcus PCC7942 complexed with NADP
Acta Crystallogr.,Sect.F, 62, 2006
2ZKG
DownloadVisualize
BU of 2zkg by Molmil
Crystal structure of unliganded SRA domain of mouse Np95
分子名称: 1,2-ETHANEDIOL, E3 ubiquitin-protein ligase UHRF1
著者Arita, K, Ariyoshi, M, Tochio, H, Nakamura, Y, Shirakawa, M.
登録日2008-03-19
公開日2008-09-09
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Recognition of hemi-methylated DNA by the SRA protein UHRF1 by a base-flipping mechanism
Nature, 455, 2008
2DUU
DownloadVisualize
BU of 2duu by Molmil
Crystal Structure of apo-form of NADP-Dependent Glyceraldehyde-3-Phosphate Dehydrogenase from Synechococcus Sp.
分子名称: Glyceraldehyde 3-phosphate dehydrogenase, SULFATE ION
著者Kitatani, T, Nakamura, Y, Wada, K, Kinoshita, T, Tamoi, M, Shigeoka, S, Tada, T.
登録日2006-07-27
公開日2006-09-05
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structure of apo-glyceraldehyde-3-phosphate dehydrogenase from Synechococcus PCC7942
Acta Crystallogr.,Sect.F, 62, 2006
<12

 

224572

件を2024-09-04に公開中

PDB statisticsPDBj update infoContact PDBjnumon