Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 282 results

8SAO
DownloadVisualize
BU of 8sao by Molmil
Crystal structure of class III lanthipeptide synthetase ThurKC in complex with ThurA1 leader peptide
Descriptor: Class III lanthionine synthetase LanKC, Class III lanthipeptide
Authors:Hernandez Garcia, A, Nair, S.K.
Deposit date:2023-04-01
Release date:2023-11-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.502 Å)
Cite:Structure and Function of a Class III Metal-Independent Lanthipeptide Synthetase.
Acs Cent.Sci., 9, 2023
8T19
DownloadVisualize
BU of 8t19 by Molmil
RiPP precursor peptide recognition element (RRE) domain of Ocin-ThiF-like partner protein, PbtF, bound to an 8 residue fragment of its precursor peptide, PbtA
Descriptor: MAGNESIUM ION, PbtA, PbtF
Authors:Cogan, D.P, Nair, S.K, Mitchell, D.A.
Deposit date:2023-06-02
Release date:2024-06-12
Method:X-RAY DIFFRACTION (1.23 Å)
Cite:Discovery and validation of RRE domains
To Be Published
1OKM
DownloadVisualize
BU of 1okm by Molmil
CARBONIC ANHYDRASE II COMPLEX WITH THE 1OKM INHIBITOR 4-SULFONAMIDE-[1-(4-AMINOBUTANE)]BENZAMIDE
Descriptor: 4-SULFONAMIDE-[1-(4-AMINOBUTANE)]BENZAMIDE, CARBONIC ANHYDRASE II, MERCURY (II) ION, ...
Authors:Elbaum, D, Nair, S.K, Patchan, M.W, Thompson, R.B, Christianson, D.W.
Deposit date:1996-06-25
Release date:1997-01-11
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure-based design of a sulfonamide probe for fluorescence anisotropy detection of zinc with a carbonic anhydrase-based biosensor.
J.Am.Chem.Soc., 118, 1996
6WPA
DownloadVisualize
BU of 6wpa by Molmil
Structure of AvaR1 bound to DNA half-site
Descriptor: AvaR1, PAL2-1-5'-GC
Authors:Kapoor, I, Olivares, P.J, Nair, S.K.
Deposit date:2020-04-26
Release date:2020-07-22
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.09 Å)
Cite:Biochemical basis for the regulation of biosynthesis of antiparasitics by bacterial hormones.
Elife, 9, 2020
1OKN
DownloadVisualize
BU of 1okn by Molmil
CARBONIC ANHYDRASE II COMPLEX WITH THE 1OKN INHIBITOR 4-SULFONAMIDE-[1-(4-N-(5-FLUORESCEIN THIOUREA)BUTANE)]
Descriptor: 4-SULFONAMIDE-[4-(THIOMETHYLAMINOBUTANE)]BENZAMIDE, CARBONIC ANHYDRASE II, MERCURY (II) ION, ...
Authors:Elbaum, D, Nair, S.K, Patchan, M.W, Thompson, R.B, Christianson, D.W.
Deposit date:1996-06-25
Release date:1997-01-11
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure-based design of a sulfonamide probe for fluorescence anisotropy detection of zinc with a carbonic anhydrase-based biosensor.
J.Am.Chem.Soc., 118, 1996
8CWX
DownloadVisualize
BU of 8cwx by Molmil
NMR structure of a Stapled Lanthipeptide Natural Product
Descriptor: Lanthipeptide Natural Product mSmoAc
Authors:Pei, Z, Zhu, L, Nair, S.K.
Deposit date:2022-05-19
Release date:2022-10-12
Method:SOLUTION NMR
Cite:Class V Lanthipeptide Cyclase Directs the Biosynthesis of a Stapled Peptide Natural Product.
J.Am.Chem.Soc., 144, 2022
7QOS
DownloadVisualize
BU of 7qos by Molmil
Cyclopropane fatty acid synthase from Aquifex aeolicous with bound ligands
Descriptor: 2-azanylethyl-[(2~{S})-2,3-di(hexadecanoyloxy)propoxy]phosphinic acid, CARBONATE ION, Cyclopropane-fatty-acyl-phospholipid synthase, ...
Authors:Lukk, T, Cronan, J.E, Nair, S.K.
Deposit date:2021-12-28
Release date:2022-02-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure of cyclopropane fatty acid synthase from Aquifex aeolicus
To Be Published
6WP7
DownloadVisualize
BU of 6wp7 by Molmil
Avenolide Binding Autoregulator AvaR1
Descriptor: AvaR1
Authors:Kapoor, I, Olivares, P.J, Nair, S.K.
Deposit date:2020-04-26
Release date:2020-06-24
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Biochemical basis for the regulation of biosynthesis of antiparasitics by bacterial hormones.
Elife, 9, 2020
5F2O
DownloadVisualize
BU of 5f2o by Molmil
Crystal structure of mycobacterial fatty acid O-methyltransferase Q154A mutant in complex with SAH and 3-hydroxy-decanoate.
Descriptor: (3~{S})-3-oxidanyldecanoic acid, S-ADENOSYL-L-HOMOCYSTEINE, fatty acid O-methyltransferase
Authors:Petronikolou, N, Nair, S.K.
Deposit date:2015-12-02
Release date:2015-12-30
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Biochemical Studies of Mycobacterial Fatty Acid Methyltransferase: A Catalyst for the Enzymatic Production of Biodiesel.
Chem.Biol., 22, 2015
5F2N
DownloadVisualize
BU of 5f2n by Molmil
Crystal structure of mycobacterial fatty acid O-methyltransferase in complex with SAH and 3-hydroxy-decanoate.
Descriptor: (3~{S})-3-oxidanyldecanoic acid, S-ADENOSYL-L-HOMOCYSTEINE, fatty acid O-methyltransferase
Authors:Petronikolou, N, Nair, S.K.
Deposit date:2015-12-02
Release date:2015-12-30
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Biochemical Studies of Mycobacterial Fatty Acid Methyltransferase: A Catalyst for the Enzymatic Production of Biodiesel.
Chem.Biol., 22, 2015
7MSK
DownloadVisualize
BU of 7msk by Molmil
ThuS glycosin S-glycosyltransferase
Descriptor: Glyco_trans_2-like domain-containing protein, MAGNESIUM ION, URIDINE-5'-DIPHOSPHATE-2-DEOXY-2-FLUORO-ALPHA-D-GLUCOSE
Authors:Garg, N, Nair, S.K.
Deposit date:2021-05-11
Release date:2022-04-13
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Structural and mechanistic investigations of protein S-glycosyltransferases.
Cell Chem Biol, 28, 2021
7MSN
DownloadVisualize
BU of 7msn by Molmil
SunS glycosin S-glycosyltransferase
Descriptor: SPbeta prophage-derived glycosyltransferase SunS, URIDINE-5'-DIPHOSPHATE-GLUCOSE
Authors:Garg, N, Nair, S.K.
Deposit date:2021-05-11
Release date:2022-04-13
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural and mechanistic investigations of protein S-glycosyltransferases.
Cell Chem Biol, 28, 2021
7MSP
DownloadVisualize
BU of 7msp by Molmil
SunS glycosin S-glycosyltransferase
Descriptor: MAGNESIUM ION, SPbeta prophage-derived glycosyltransferase SunS, URIDINE-5'-DIPHOSPHATE-GLUCOSE
Authors:Garg, N, Nair, S.K.
Deposit date:2021-05-11
Release date:2022-04-13
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural and mechanistic investigations of protein S-glycosyltransferases.
Cell Chem Biol, 28, 2021
8F72
DownloadVisualize
BU of 8f72 by Molmil
Phage P32 gp64- RNA polymerase
Descriptor: MAGNESIUM ION, TPR_REGION domain-containing protein
Authors:Bae, B, Nair, S.K.
Deposit date:2022-11-17
Release date:2023-12-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Thermophage RNA polymerase
To Be Published
5DLY
DownloadVisualize
BU of 5dly by Molmil
Crystal structure of the plantazolicin methyltransferase BamL in complex with monoazolic desmethylPZN analog and SAH
Descriptor: S-ADENOSYL-L-HOMOCYSTEINE, plantazolicin methyltransferase BamL, prop-2-en-1-yl 2-[(1S)-1-amino-4-carbamimidamidobutyl]-1,3-thiazole-4-carboxylate
Authors:Hao, Y, Nair, S.K.
Deposit date:2015-09-07
Release date:2015-09-30
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Insights into methyltransferase specificity and bioactivity of derivatives of the antibiotic plantazolicin.
ACS Chem. Biol., 10, 2015
5DM1
DownloadVisualize
BU of 5dm1 by Molmil
Crystal structure of the plantazolicin methyltransferase BpumL in complex with monoazolic desmethylPZN analog and SAH
Descriptor: GLYCEROL, Methyltransferase domain family, S-ADENOSYL-L-HOMOCYSTEINE, ...
Authors:Hao, Y, Nair, S.K.
Deposit date:2015-09-07
Release date:2015-09-23
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Insights into methyltransferase specificity and bioactivity of derivatives of the antibiotic plantazolicin.
Acs Chem.Biol., 10, 2015
5DM0
DownloadVisualize
BU of 5dm0 by Molmil
Crystal structure of the plantazolicin methyltransferase BamL in complex with triazolic desmethylPZN analog and SAH
Descriptor: S-ADENOSYL-L-HOMOCYSTEINE, SULFATE ION, ethyl 2-(2-{2-[(1S)-1-amino-4-carbamimidamidobutyl]-1,3-thiazol-4-yl}-5-methyl-1,3-oxazol-4-yl)-1,3-thiazole-4-carboxylate, ...
Authors:Hao, Y, Nair, S.K.
Deposit date:2015-09-07
Release date:2015-09-23
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Insights into methyltransferase specificity and bioactivity of derivatives of the antibiotic plantazolicin.
Acs Chem.Biol., 10, 2015
5DM4
DownloadVisualize
BU of 5dm4 by Molmil
Crystal structure of the plantazolicin methyltransferase BpumL in complex with pentazolic desmethylPZN analog and SAH
Descriptor: 1-[(4S)-4-(4-{4-[4-(5,5'-dimethyl-2,4'-bi-1,3-oxazol-2'-yl)-1,3-thiazol-2-yl]-5-methyl-1,3-oxazol-2-yl}-1,3-thiazol-2-yl)-4-(methylamino)butyl]guanidine, GLYCEROL, Methyltransferase domain family, ...
Authors:Hao, Y, Nair, S.K.
Deposit date:2015-09-07
Release date:2015-09-23
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Insights into methyltransferase specificity and bioactivity of derivatives of the antibiotic plantazolicin.
Acs Chem.Biol., 10, 2015
5DM2
DownloadVisualize
BU of 5dm2 by Molmil
Crystal structure of the plantazolicin methyltransferase BpumL in complex with triazolic desmethylPZN analog and SAH
Descriptor: GLYCEROL, Methyltransferase domain family, S-ADENOSYL-L-HOMOCYSTEINE, ...
Authors:Hao, Y, Nair, S.K.
Deposit date:2015-09-07
Release date:2015-09-23
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Insights into methyltransferase specificity and bioactivity of derivatives of the antibiotic plantazolicin.
Acs Chem.Biol., 10, 2015
5DZT
DownloadVisualize
BU of 5dzt by Molmil
Crystal structure of class II lanthipeptide synthetase CylM in complex with AMP
Descriptor: ADENOSINE MONOPHOSPHATE, CylM, ZINC ION
Authors:Dong, S.H, Lukk, T, Nair, S.K.
Deposit date:2015-09-26
Release date:2015-10-14
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The enterococcal cytolysin synthetase has an unanticipated lipid kinase fold.
Elife, 4, 2015
7UD6
DownloadVisualize
BU of 7ud6 by Molmil
Designed Enzyme SH3-588 (Catechol O-methyltransferase catalytic domain and Src homology 3 binding domain fusion)
Descriptor: POTASSIUM ION, S-ADENOSYL-L-HOMOCYSTEINE, Tyrosine-protein kinase Fyn,Catechol O-methyltransferase
Authors:Ongpipattanakul, C, Nair, S.K.
Deposit date:2022-03-18
Release date:2023-01-11
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Designer installation of a substrate recruitment domain to tailor enzyme specificity.
Nat.Chem.Biol., 19, 2023
7RC3
DownloadVisualize
BU of 7rc3 by Molmil
Aeronamide N-methyltransferase, AerE (Y137F)
Descriptor: ASPARTIC ACID, CALCIUM ION, HEXAETHYLENE GLYCOL, ...
Authors:Cogan, D.P, Reyes, R, Nair, S.K.
Deposit date:2021-07-07
Release date:2022-03-30
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Structure and mechanism for iterative amide N -methylation in the biosynthesis of channel-forming peptide cytotoxins.
Proc.Natl.Acad.Sci.USA, 119, 2022
7RC4
DownloadVisualize
BU of 7rc4 by Molmil
Aeronamide N-methyltransferase, AerE (D141A)
Descriptor: CALCIUM ION, HEXAETHYLENE GLYCOL, Methyltransferase family protein, ...
Authors:Cogan, D.P, Reyes, R, Nair, S.K.
Deposit date:2021-07-07
Release date:2022-03-30
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Structure and mechanism for iterative amide N -methylation in the biosynthesis of channel-forming peptide cytotoxins.
Proc.Natl.Acad.Sci.USA, 119, 2022
7RC6
DownloadVisualize
BU of 7rc6 by Molmil
Aeronamide N-methyltransferase, AerE, bound to modified peptide substrate, AerA-DL,34
Descriptor: Aeronamide A peptide, Methyltransferase family protein, S-ADENOSYL-L-HOMOCYSTEINE, ...
Authors:Cogan, D.P, Reyes, R, Nair, S.K.
Deposit date:2021-07-07
Release date:2022-03-30
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Structure and mechanism for iterative amide N -methylation in the biosynthesis of channel-forming peptide cytotoxins.
Proc.Natl.Acad.Sci.USA, 119, 2022
7RC5
DownloadVisualize
BU of 7rc5 by Molmil
Aeronamide N-methyltransferase, AerE (N231A)
Descriptor: CALCIUM ION, Methyltransferase family protein, S-ADENOSYL-L-HOMOCYSTEINE, ...
Authors:Cogan, D.P, Reyes, R, Nair, S.K.
Deposit date:2021-07-07
Release date:2022-03-30
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Structure and mechanism for iterative amide N -methylation in the biosynthesis of channel-forming peptide cytotoxins.
Proc.Natl.Acad.Sci.USA, 119, 2022

221371

PDB entries from 2024-06-19

PDB statisticsPDBj update infoContact PDBjnumon