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PDB: 17068 results

1G9K
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CRYSTAL STRUCTURE OF A PSYCHROPHILIC ALKALINE PROTEASE FROM PSEUDOMONAS TAC II 18
Descriptor: CALCIUM ION, SERRALYSIN, SULFATE ION, ...
Authors:Aghajari, N, Haser, R.
Deposit date:2000-11-24
Release date:2003-02-14
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Crystal structures of a psychrophilic metalloprotease reveal new insights into catalysis by cold-adapted proteases
Proteins, 50, 2003
1G75
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BU of 1g75 by Molmil
MOLECULAR AND CRYSTAL STRUCTURE OF D(CGCGAATF5UCGCG): 5-FORMYLURIDINE/ ADENOSINE BASE-PAIRS IN B-DNA
Descriptor: 5'-D(*CP*GP*CP*GP*AP*AP*TP*(UFR)P*CP*GP*CP*G)-3', MAGNESIUM ION, POTASSIUM ION
Authors:Tsunoda, M, Karino, N, Ueno, Y, Matsuda, A, Takenaka, A.
Deposit date:2000-11-09
Release date:2001-02-05
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Crystallization and preliminary X-ray analysis of a DNA dodecamer containing 2'-deoxy-5-formyluridine; what is the role of magnesium cation in crystallization of Dickerson-type DNA dodecamers?
Acta Crystallogr.,Sect.D, 57, 2001
5TGZ
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Crystal Structure of the Human Cannabinoid Receptor CB1
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 4-[4-[2-(2,4-dichlorophenyl)-4-methyl-5-(piperidin-1-ylcarbamoyl)pyrazol-3-yl]phenyl]but-3-ynyl nitrate, Cannabinoid receptor 1,Flavodoxin,Cannabinoid receptor 1, ...
Authors:Hua, T, Vemuri, K, Pu, M, Qu, L, Han, G.W, Wu, Y, Zhao, S, Shui, W, Li, S, Korde, A, Laprairie, R.B, Stahl, E.L, Ho, J.H, Zvonok, N, Zhou, H, Kufareva, I, Wu, B, Zhao, Q, Hanson, M.A, Bohn, L.M, Makriyannis, A, Stevens, R.C, Liu, Z.J.
Deposit date:2016-09-28
Release date:2016-11-02
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal Structure of the Human Cannabinoid Receptor CB1.
Cell, 167, 2016
2QOM
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The crystal structure of the E.coli EspP autotransporter Beta-domain.
Descriptor: Serine protease espP
Authors:Barnard, T.J, Dautin, N, Lukacik, P, Bernstein, H.D, Buchanan, S.K.
Deposit date:2007-07-20
Release date:2007-11-13
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.66 Å)
Cite:Autotransporter structure reveals intra-barrel cleavage followed by conformational changes.
Nat.Struct.Mol.Biol., 14, 2007
5T6G
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2.45 A resolution structure of Norovirus 3CL protease in complex with the dipeptidyl inhibitor 7m (hexagonal form)
Descriptor: 3-cyclohexyl-N-{(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-N~2~-(octylsulfonyl)-L-alaninamide, Genome polyprotein
Authors:Lovell, S, Battaile, K.P, Mehzabeen, N, Kankanamalage, A.C.G, Kim, Y, Rathnayake, A.D, Damalanka, V.C, Weerawarna, P.M, Doyle, S.T, Alsoudi, A.F, Dissanayake, D.M.P, Chang, K.-O, Groutas, W.C.
Deposit date:2016-09-01
Release date:2016-11-23
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structure-based exploration and exploitation of the S4 subsite of norovirus 3CL protease in the design of potent and permeable inhibitors.
Eur J Med Chem, 126, 2016
1GCJ
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N-TERMINAL FRAGMENT OF IMPORTIN-BETA
Descriptor: IMPORTIN BETA
Authors:Lee, S.J, Imamoto, N, Sakai, H, Nakagawa, A, Kose, S, Koike, M, Yamamoto, M, Kumasaka, T, Yoneda, Y, Tsukihara, T.
Deposit date:2000-07-31
Release date:2000-10-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The adoption of a twisted structure of importin-beta is essential for the protein-protein interaction required for nuclear transport.
J.Mol.Biol., 302, 2000
2R15
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BU of 2r15 by Molmil
Crystal structure of the myomesin domains 12 and 13
Descriptor: ACETATE ION, GLYCEROL, Myomesin-1
Authors:Pinotsis, N, Wilmanns, M, Lange, S.
Deposit date:2007-08-22
Release date:2008-01-29
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Molecular basis of the C-terminal tail-to-tail assembly of the sarcomeric filament protein myomesin.
Embo J., 27, 2008
1GJG
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Peptide Antagonist of IGFBP1, (i,i+8) Covalently Restrained Analog, Minimized Average Structure
Descriptor: IGFBP-1 antagonist, PENTANE
Authors:Skelton, N.J, Chen, Y.M, Dubree, N, Quan, C, Jackson, D.Y, Cochran, A.G, Zobel, K, Deshayes, K, Baca, M, Pisabarro, M.T, Lowman, H.B.
Deposit date:2001-05-11
Release date:2001-05-30
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Structure-function analysis of a phage display-derived peptide that binds to insulin-like growth factor binding protein 1.
Biochemistry, 40, 2001
1GKL
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S954A mutant of the feruloyl esterase module from clostridium thermocellum complexed with ferulic acid
Descriptor: 3-(4-HYDROXY-3-METHOXYPHENYL)-2-PROPENOIC ACID, ACETATE ION, CADMIUM ION, ...
Authors:Prates, J.A.M, Tarbouriech, N, Charnock, S.J, Fontes, C.M.G.A, Ferreira, L.M.A, Davies, G.J.
Deposit date:2001-08-15
Release date:2001-12-13
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:The structure of the feruloyl esterase module of xylanase 10B from Clostridium thermocellum provides insights into substrate recognition.
Structure, 9, 2001
2VAD
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Monomeric red fluorescent protein, DsRed.M1
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, RED FLUORESCENT PROTEIN, ...
Authors:Strongin, D.E, Bevis, B, Khuong, N, Downing, M.E, Strack, R.L, Sundaram, K, Glick, B.S, Keenan, R.J.
Deposit date:2007-08-30
Release date:2007-11-06
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Structural Rearrangements Near the Chromophore Influence the Maturation Speed and Brightness of Dsred Variants.
Protein Eng.Des.Sel., 20, 2007
2V17
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BU of 2v17 by Molmil
Structure of the complex of antibody MN423 with a fragment of tau protein
Descriptor: MONOCLONAL ANTIBODY FAB FRAGMENT MN423, PEPTIDE FRAGMENT
Authors:Sevcik, J, Skrabana, R, Csokova, N, Dvorsky, R, Novak, M.
Deposit date:2007-05-22
Release date:2007-12-25
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:X-Ray Structure of the Phf Core C-Terminus: Insight Into the Folding of the Intrinsically Disordered Protein Tau in Alzheimer'S Disease.
FEBS Lett., 581, 2007
1G19
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STRUCTURE OF RECA PROTEIN
Descriptor: PHOSPHATE ION, RECA PROTEIN
Authors:Datta, S, Prabu, M.M, Vaze, M.B, Ganesh, N, Chandra, N.R, Muniyappa, K, Vijayan, M, TB Structural Genomics Consortium (TBSGC)
Deposit date:2000-10-11
Release date:2000-12-11
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structures of Mycobacterium tuberculosis RecA and its complex with ADP-AlF(4): implications for decreased ATPase activity and molecular aggregation
Nucleic Acids Res., 28, 2000
1G65
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Crystal structure of epoxomicin:20s proteasome reveals a molecular basis for selectivity of alpha,beta-epoxyketone proteasome inhibitors
Descriptor: EPOXOMICIN (peptide inhibitor), MAGNESIUM ION, Proteasome component C1, ...
Authors:Groll, M, Kim, K.B, Kairies, N, Huber, R, Crews, C.
Deposit date:2000-11-03
Release date:2000-11-27
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal Structure of Epoxomicin:20S Proteasome reveals a molecular basis for selectivity of alpha,beta-Epoxyketone Proteasome Inhibitors
J.Am.Chem.Soc., 122, 2000
2V2S
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BU of 2v2s by Molmil
Mutant R59M recombinant horse spleen apoferritin crystallized in acidic conditions
Descriptor: CADMIUM ION, FERRITIN LIGHT CHAIN, GLYCEROL, ...
Authors:De Val, N, Declercq, J.P.
Deposit date:2007-06-06
Release date:2008-06-24
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Structural Analysis of Haemin Demetallation by L-Chain Apoferritins
J.Inorg.Biochem., 112, 2012
1G2N
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BU of 1g2n by Molmil
CRYSTAL STRUCTURE OF THE LIGAND BINDING DOMAIN OF THE ULTRASPIRACLE PROTEIN USP, THE ORTHOLOG OF RXRS IN INSECTS
Descriptor: L-ALPHA-PHOSPHATIDYL-BETA-OLEOYL-GAMMA-PALMITOYL-PHOSPHATIDYLETHANOLAMINE, ULTRASPIRACLE PROTEIN
Authors:Billas, I.M.L, Moulinier, L, Rochel, N, Moras, D, Structural Proteomics in Europe (SPINE)
Deposit date:2000-10-20
Release date:2001-04-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of the ligand-binding domain of the ultraspiracle protein USP, the ortholog of retinoid X receptors in insects.
J.Biol.Chem., 276, 2001
5VKG
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BU of 5vkg by Molmil
Solution-state NMR structural ensemble of human Tsg101 UEV in complex with tenatoprazole
Descriptor: 4-methoxy-1-(5-methoxy-3H-imidazo[4,5-b]pyridin-2-yl)-3,5-dimethyl-2-(sulfanylmethyl)pyridin-1-ium, Tumor susceptibility gene 101 protein
Authors:Strickland, M, Ehrlich, L.S, Watanabe, S, Khan, M, Strub, M.-P, Luan, C.H, Powell, M.D, Leis, J, Tjandra, N, Carter, C.
Deposit date:2017-04-21
Release date:2017-11-15
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Tsg101 chaperone function revealed by HIV-1 assembly inhibitors.
Nat Commun, 8, 2017
2V2O
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Mutant R59M recombinant horse spleen apoferritin cocrystallized with haemin in basic conditions
Descriptor: CADMIUM ION, FERRITIN LIGHT CHAIN, GLYCEROL, ...
Authors:De Val, N, Declercq, J.P.
Deposit date:2007-06-06
Release date:2008-06-24
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Structural Analysis of Haemin Demetallation by L-Chain Apoferritins
J.Inorg.Biochem., 112, 2012
2V65
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Apo LDH from the psychrophile C. gunnari
Descriptor: L-LACTATE DEHYDROGENASE A CHAIN
Authors:Coquelle, N, Madern, D, Vellieux, F.
Deposit date:2007-07-13
Release date:2007-09-25
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Activity, Stability and Structural Studies of Lactate Dehydrogenases Adapted to Extreme Thermal Environments.
J.Mol.Biol., 374, 2007
1G6H
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BU of 1g6h by Molmil
CRYSTAL STRUCTURE OF THE ADP CONFORMATION OF MJ1267, AN ATP-BINDING CASSETTE OF AN ABC TRANSPORTER
Descriptor: ADENOSINE-5'-DIPHOSPHATE, HIGH-AFFINITY BRANCHED-CHAIN AMINO ACID TRANSPORT ATP-BINDING PROTEIN, MAGNESIUM ION, ...
Authors:Yuan, Y.-R, Martsinkevich, O, Karpowich, N, Millen, L, Thomas, P.J, Hunt, J.F.
Deposit date:2000-11-06
Release date:2001-07-18
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structures of the MJ1267 ATP binding cassette reveal an induced-fit effect at the ATPase active site of an ABC transporter.
Structure, 9, 2001
1GA2
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BU of 1ga2 by Molmil
THE CRYSTAL STRUCTURE OF ENDOGLUCANASE 9G FROM CLOSTRIDIUM CELLULOLYTICUM COMPLEXED WITH CELLOBIOSE
Descriptor: ACETIC ACID, CALCIUM ION, ENDOGLUCANASE 9G, ...
Authors:Mandelman, D, Belaich, A, Belaich, J.P, Aghajari, N, Driguez, H, Haser, R.
Deposit date:2000-11-29
Release date:2003-07-22
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:X-Ray Crystal Structure of the Multidomain Endoglucanase Cel9G from Clostridium cellulolyticum Complexed with Natural and Synthetic Cello-Oligosaccharides
J.BACTERIOL., 185, 2003
2VI9
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Crystal structure of S172AbsSHMT Glycine external aldimine
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, GLYCINE, PHOSPHATE ION, ...
Authors:Rajaram, V, Bhavani, B.S, Prakash, V, Appaji Rao, N, Savithri, H.S, Murthy, M.R.N.
Deposit date:2007-11-28
Release date:2007-12-18
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of S172Absshmt and its Complexes
To be Published
2V6M
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Crystal structure of lactate dehydrogenase from Thermus Thermophilus HB8 (Apo form)
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, L-LACTATE DEHYDROGENASE
Authors:Coquelle, N, Fioravanti, E, Weik, M, Vellieux, F.
Deposit date:2007-07-19
Release date:2007-09-25
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Activity, stability and structural studies of lactate dehydrogenases adapted to extreme thermal environments.
J. Mol. Biol., 374, 2007
5WEJ
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1.95 A resolution structure of Norovirus 3CL protease in complex with a dipeptidyl oxazolidinone-based inhibitor
Descriptor: (2S)-2-{(5S)-5-[(3-chlorophenyl)methyl]-2-oxo-1,3-oxazolidin-3-yl}-4-methyl-N-{(2S)-1-oxo-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}pentanamide, Genome polyprotein
Authors:Lovell, S, Battaile, K.P, Mehzabeen, N, Damalanka, V.C, Kim, Y, Kankanamalage, A.C.G, Rathnayake, A.D, Nguyen, H.N, Chang, K.O, Groutas, W.C.
Deposit date:2017-07-10
Release date:2017-12-13
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structure-guided design, synthesis and evaluation of oxazolidinone-based inhibitors of norovirus 3CL protease.
Eur J Med Chem, 143, 2017
5WCW
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Phosphotriesterase variant S3
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CACODYLATE ION, Phosphotriesterase, ...
Authors:Miton, C.M, Campbell, E.C, Jackson, C.J, Tokuriki, N.
Deposit date:2017-07-02
Release date:2019-01-23
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.457 Å)
Cite:Phosphotriesterase variant S4
To Be Published
2VA7
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X-ray crystal structure of beta secretase complexed with compound 27
Descriptor: (6R)-2-amino-6-[2-(3'-methoxybiphenyl-3-yl)ethyl]-3,6-dimethyl-5,6-dihydropyrimidin-4(3H)-one, BETA-SECRETASE 1 ., IODIDE ION
Authors:Edwards, P.D, Albert, J.S, Sylvester, M, Aharony, D, Andisik, D, Callaghan, O, Campbell, J.B, Carr, R.A, Chessari, G, Congreve, M, Frederickson, M, Folmer, R.H.A, Geschwindner, S, Koether, G, Kolmodin, K, Krumrine, J, Mauger, R.C, Murray, C.W, Olsson, L.L, Patel, S, Spear, N, Tian, G.
Deposit date:2007-08-30
Release date:2007-11-13
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Application of Fragment-Based Lead Generation to the Discovery of Novel, Cyclic Amidine Beta-Secretase Inhibitors with Nanomolar Potency, Cellular Activity, and High Ligand Efficiency.
J.Med.Chem., 50, 2007

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