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PDB: 17048 results

1OCS
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BU of 1ocs by Molmil
Crystal structure of the yeast PX-doamin protein Grd19p (sorting nexin3) complexed to phosphatidylinosytol-3-phosphate.
Descriptor: GLYCEROL, SORTING NEXIN GRD19
Authors:Zhou, C.Z, Li De La Sierra-Gallay, I, Cheruel, S, Collinet, B, Minard, P, Blondeau, K, Henkes, G, Aufrere, R, Leulliot, N, Graille, M, Sorel, I, Savarin, P, De La Torre, F, Poupon, A, Janin, J, Van Tilbeurgh, H.
Deposit date:2003-02-10
Release date:2003-12-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Crystal Structure of the Yeast Phox Homology (Px) Protein Grd19P (Sorting Nexin 3) Complexed to Phosphatidylinositol-3-Phosphate
J.Biol.Chem., 278, 2003
4XI0
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MamA 41-end from Desulfovibrio magneticus RS-1
Descriptor: Magnetosome protein MamA
Authors:Zarivach, R, Zeytuni, N, Cronin, S, Davidov, G, Baran, D, Stein, T.
Deposit date:2015-01-06
Release date:2015-08-19
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.88 Å)
Cite:MamA as a Model Protein for Structure-Based Insight into the Evolutionary Origins of Magnetotactic Bacteria.
Plos One, 10, 2015
1NMY
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BU of 1nmy by Molmil
Crystal structure of human thymidylate kinase with FLTMP and AppNHp
Descriptor: 3'-FLUORO-3'-DEOXYTHYMIDINE MONOPHOSPHATE, ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Ostermann, N, Segura-Pena, D, Meier, C, Veit, T, Monnerjahn, M, Konrad, M, Lavie, A.
Deposit date:2003-01-12
Release date:2003-03-18
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structures of human thymidylate kinase in complex with prodrugs: implications for the structure-based design of novel compounds
Biochemistry, 42, 2003
4XKE
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BU of 4xke by Molmil
Crystal structure of hemagglutinin from Taiwan (2013) H6N1 influenza virus in complex with 3'-SLN
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin HA1 chain, Hemagglutinin HA2 chain, ...
Authors:Tzarum, N, Zhu, X, Wilson, I.A.
Deposit date:2015-01-11
Release date:2015-04-01
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.356 Å)
Cite:Structure and Receptor Binding of the Hemagglutinin from a Human H6N1 Influenza Virus.
Cell Host Microbe, 17, 2015
1FPN
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BU of 1fpn by Molmil
HUMAN RHINOVIRUS SEROTYPE 2 (HRV2)
Descriptor: COAT PROTEIN VP1, COAT PROTEIN VP2, COAT PROTEIN VP3, ...
Authors:Verdaguer, N, Blaas, D, Fita, I.
Deposit date:2000-08-31
Release date:2000-09-20
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of human rhinovirus serotype 2 (HRV2).
J.Mol.Biol., 300, 2000
6NPE
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BU of 6npe by Molmil
C-abl Kinase domain with the activator(cmpd6), 2-cyano-N-(4-(3,4-dichlorophenyl)thiazol-2-yl)acetamide
Descriptor: 2-cyano-~{N}-[4-(3,4-dichlorophenyl)-1,3-thiazol-2-yl]ethanamide, 4-(4-METHYL-PIPERAZIN-1-YLMETHYL)-N-[4-METHYL-3-(4-PYRIDIN-3-YL-PYRIMIDIN-2-YLAMINO)-PHENYL]-BENZAMIDE, NONAETHYLENE GLYCOL, ...
Authors:campobasso, N.
Deposit date:2019-01-17
Release date:2019-03-13
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Identification and Optimization of Novel Small c-Abl Kinase Activators Using Fragment and HTS Methodologies.
J. Med. Chem., 62, 2019
4XU4
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BU of 4xu4 by Molmil
Crystal structure of a mycobacterial Insig homolog MvINS from Mycobacterium vanbaalenii at 1.9A resolution
Descriptor: DECYLAMINE-N,N-DIMETHYL-N-OXIDE, Uncharacterized protein, nonyl beta-D-glucopyranoside
Authors:Ren, R.B, Wu, J.P, Yan, C.Y, He, Y, Yan, N.
Deposit date:2015-01-25
Release date:2015-10-14
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.901 Å)
Cite:PROTEIN STRUCTURE. Crystal structure of a mycobacterial Insig homolog provides insight into how these sensors monitor sterol levels
Science, 349, 2015
1OCU
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BU of 1ocu by Molmil
Crystal structure of the yeast PX-domain protein Grd19p (sorting nexin 3) complexed to phosphatidylinosytol-3-phosphate.
Descriptor: 2-(BUTANOYLOXY)-1-{[(HYDROXY{[2,3,4,6-TETRAHYDROXY-5-(PHOSPHONOOXY)CYCLOHEXYL]OXY}PHOSPHORYL)OXY]METHYL}ETHYL BUTANOATE, SORTING NEXIN
Authors:Zhou, C.Z, Li de La Sierra-Gallay, I, Cheruel, S, Collinet, B, Minard, P, Blondeau, K, Henkes, G, Aufrere, R, Leulliot, N, Graille, M, Sorel, I, Savarin, P, de la Torre, F, Poupon, A, Janin, J, van Tilbeurgh, H.
Deposit date:2003-02-10
Release date:2003-12-12
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of the yeast Phox homology (PX) domain protein Grd19p complexed to phosphatidylinositol-3-phosphate.
J. Biol. Chem., 278, 2003
4Y0L
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BU of 4y0l by Molmil
Mycobacterial membrane protein MmpL11D2
Descriptor: IODIDE ION, Putative membrane protein mmpL11, SULFATE ION
Authors:Torres, R, Chim, N, Goulding, C.W.
Deposit date:2015-02-06
Release date:2015-08-12
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The Structure and Interactions of Periplasmic Domains of Crucial MmpL Membrane Proteins from Mycobacterium tuberculosis.
Chem.Biol., 22, 2015
6YCB
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BU of 6ycb by Molmil
Structure the ananain protease from Ananas comosus covalently bound to with the E64 inhibitor
Descriptor: Ananain, GLYCEROL, L(+)-TARTARIC ACID, ...
Authors:Azarkan, M, Charlier, P, Herman, R, Delbrassine, F, Sauvage, E, M Rabet, N, Calvo Esposito, R, Kerff, F.
Deposit date:2020-03-18
Release date:2020-11-25
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.257 Å)
Cite:Structures of the free and inhibitors-bound forms of bromelain and ananain from Ananas comosus stem and in vitro study of their cytotoxicity.
Sci Rep, 10, 2020
1OBB
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BU of 1obb by Molmil
alpha-glucosidase A, AglA, from Thermotoga maritima in complex with maltose and NAD+
Descriptor: ALPHA-GLUCOSIDASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Lodge, J.A, Maier, T, Liebl, W, Hoffmann, V, Strater, N.
Deposit date:2003-01-29
Release date:2003-05-21
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of Thermotoga Maritima Alpha-Glucosidase Agla Defines a New Clan of Nad+-Dependent Glycosidases
J.Biol.Chem., 278, 2003
6N7V
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BU of 6n7v by Molmil
Structure of bacteriophage T7 gp4 (helicase-primase, E343Q mutant) in complex with ssDNA, dTTP, AC dinucleotide, and CTP (from multiple lead complexes)
Descriptor: DNA (93-MER), DNA primase/helicase, MAGNESIUM ION, ...
Authors:Gao, Y, Fox, T, Val, N, Yang, W.
Deposit date:2018-11-28
Release date:2019-03-06
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structures and operating principles of the replisome.
Science, 363, 2019
4XTC
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BU of 4xtc by Molmil
Crystal structure of bacterial alginate ABC transporter in complex with alginate pentasaccharide-bound periplasmic protein
Descriptor: AlgM1, AlgM2, AlgQ2, ...
Authors:Kaneko, A, Maruyama, Y, Mizuno, N, Baba, S, Kumasaka, T, Mikami, B, Murata, K, Hashimoto, W.
Deposit date:2015-01-23
Release date:2016-03-02
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:A solute-binding protein in the closed conformation induces ATP hydrolysis in a bacterial ATP-binding cassette transporter involved in the import of alginate.
J.Biol.Chem., 292, 2017
1O0Q
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BU of 1o0q by Molmil
Crystal structure of a cold adapted alkaline protease from Pseudomonas TAC II 18, co-crystallized with 1 mM EDTA
Descriptor: CALCIUM ION, SULFATE ION, serralysin
Authors:Ravaud, S, Gouet, P, Haser, R, Aghajari, N.
Deposit date:2003-02-24
Release date:2003-07-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Probing the role of divalent metal ions in a bacterial psychrophilic metalloprotease: binding studies of an enzyme in the crystalline state by x-ray crystallography.
J.Bacteriol., 185, 2003
1FFG
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BU of 1ffg by Molmil
CHEY-BINDING DOMAIN OF CHEA IN COMPLEX WITH CHEY AT 2.1 A RESOLUTION
Descriptor: CHEMOTAXIS PROTEIN CHEA, CHEMOTAXIS PROTEIN CHEY, MANGANESE (II) ION
Authors:Gouet, P, Chinardet, N, Welch, M, Guillet, V, Birck, C, Mourey, L, Samama, J.-P.
Deposit date:2000-07-25
Release date:2001-01-17
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Further insights into the mechanism of function of the response regulator CheY from crystallographic studies of the CheY--CheA(124--257) complex.
Acta Crystallogr.,Sect.D, 57, 2001
6YCE
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BU of 6yce by Molmil
Structure the bromelain protease from Ananas comosus with a thiomethylated active cysteine
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, FBSB, ISOPROPYL ALCOHOL, ...
Authors:Azarkan, M, Charlier, P, Herman, R, Delbrassine, F, Sauvage, E, M Rabet, N, Calvo Esposito, R, Kerff, F.
Deposit date:2020-03-18
Release date:2020-11-25
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structures of the free and inhibitors-bound forms of bromelain and ananain from Ananas comosus stem and in vitro study of their cytotoxicity.
Sci Rep, 10, 2020
4XTK
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BU of 4xtk by Molmil
Structure of TM1797, a CAS1 protein from Thermotoga maritima
Descriptor: CRISPR-associated endonuclease Cas1
Authors:Petit, P, Beloglazova, N, Skarina, T, Chang, C, Edwards, A, Joachimiak, A, Savchenko, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2015-01-23
Release date:2015-02-11
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure and nuclease activity of tm1797, a cas1 protein from thermotoga maritima
To Be Published
1NMZ
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BU of 1nmz by Molmil
Crystal structure of human thymidylate kinase with NH2TMP and AppNHp
Descriptor: 3'-DEOXY-3'-AMINOTHYMIDINE MONOPHOSPHATE, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Ostermann, N, Segura-Pena, D, Meier, C, Veit, T, Monnerjahn, M, Konrad, M, Lavie, A.
Deposit date:2003-01-12
Release date:2003-03-18
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structures of human thymidylate kinase in complex with prodrugs: implications for the structure-based design of novel compounds
Biochemistry, 42, 2003
4XZY
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BU of 4xzy by Molmil
Crystal structure of dipeptidyl peptidase 11 (DPP11) from Porphyromonas gingivalis
Descriptor: GLYCEROL, Peptidase S46
Authors:Sakamoto, Y, Suzuki, Y, Iizuka, I, Tateoka, C, Roppongi, S, Fujimoto, M, Nonaka, T, Ogasawara, W, Tanaka, N.
Deposit date:2015-02-05
Release date:2015-07-15
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural and mutational analyses of dipeptidyl peptidase 11 from Porphyromonas gingivalis reveal the molecular basis for strict substrate specificity.
Sci Rep, 5, 2015
1NTY
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BU of 1nty by Molmil
Crystal structure of the first DH/PH domain of Trio to 1.7 A
Descriptor: Triple functional domain protein
Authors:Skowronek, K.R, Zheng, Y, Nassar, N.
Deposit date:2003-01-30
Release date:2004-06-29
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The C-terminal basic tail of RhoG assists the guanine nucleotide exchange factor trio in binding to phospholipids.
J.Biol.Chem., 279, 2004
4XOL
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BU of 4xol by Molmil
Observing the overall rocking motion of a protein in a crystal - Cubic Ubiquitin crystals.
Descriptor: Ubiquitin, ZINC ION
Authors:Coquelle, N, Peixiang, M, Schanda, P, Colletier, J.P.
Deposit date:2015-01-16
Release date:2015-10-14
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.91 Å)
Cite:Observing the overall rocking motion of a protein in a crystal.
Nat Commun, 6, 2015
1NZ3
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BU of 1nz3 by Molmil
K45E-K63E Variant of Horse Heart Myoglobin
Descriptor: Myoglobin, PROTOPORPHYRIN IX CONTAINING FE
Authors:Hunter, C.L, Maurus, R, Mauk, M.R, Lee, H, Raven, E.L, Tong, H, Nguyen, N, Smith, S, Brayer, G.D, Mauk, A.G.
Deposit date:2003-02-15
Release date:2003-04-08
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Introduction and characterization of a functionally linked metal ion binding site at the exposed heme edge of myoglobin
Proc.Natl.Acad.Sci.USA, 100, 2003
4XQU
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BU of 4xqu by Molmil
Crystal structure of hemagglutinin from Jiangxi-Donghu (2013) H10N8 influenza virus in complex with 3'-SLN
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin HA1, ...
Authors:Tzarum, N, Zhang, H, Zhu, X, Wilson, I.A.
Deposit date:2015-01-20
Release date:2015-04-01
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:A Human-Infecting H10N8 Influenza Virus Retains a Strong Preference for Avian-type Receptors.
Cell Host Microbe, 17, 2015
6G9P
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BU of 6g9p by Molmil
Structural basis for the inhibition of E. coli PBP2
Descriptor: Peptidoglycan D,D-transpeptidase MrdA
Authors:Ruff, M, Levy, N.
Deposit date:2018-04-11
Release date:2019-05-22
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.101 Å)
Cite:Structural Basis for E. coli Penicillin Binding Protein (PBP) 2 Inhibition, a Platform for Drug Design.
J.Med.Chem., 62, 2019
4Y01
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BU of 4y01 by Molmil
Crystal structure of dipeptidyl peptidase 11 (DPP11) from Porphyromonas gingivalis
Descriptor: GLYCEROL, Peptidase S46
Authors:Sakamoto, Y, Suzuki, Y, Iizuka, I, Tateoka, C, Roppongi, S, Fujimoto, M, Nonaka, T, Ogasawara, W, Tanaka, N.
Deposit date:2015-02-05
Release date:2015-07-15
Last modified:2020-02-05
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Structural and mutational analyses of dipeptidyl peptidase 11 from Porphyromonas gingivalis reveal the molecular basis for strict substrate specificity.
Sci Rep, 5, 2015

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