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PDB: 92 results

4ARU
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BU of 4aru by Molmil
Hafnia Alvei phytase in complex with tartrate
Descriptor: CHLORIDE ION, HISTIDINE ACID PHOSPHATASE, L(+)-TARTARIC ACID, ...
Authors:Ariza, A, Moroz, O.V, Blagova, E.B, Turkenburg, J.P, Vevodova, J, Roberts, S, Vind, J, Sjoholm, C, Lassen, S.F, De Maria, L, Glitsoe, V, Skov, L.K, Wilson, K.S.
Deposit date:2012-04-26
Release date:2013-05-08
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Degradation of Phytate by the 6-Phytase from Hafnia Alvei: A Combined Structural and Solution Study.
Plos One, 8, 2013
4ARS
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BU of 4ars by Molmil
Hafnia Alvei phytase apo form
Descriptor: ACETATE ION, GLYCEROL, HISTIDINE ACID PHOSPHATASE
Authors:Ariza, A, Moroz, O.V, Blagova, E.B, Turkenburg, J.P, Vevodova, J, Roberts, S, Vind, J, Sjoholm, C, Lassen, S.F, De Maria, L, Glitsoe, V, Skov, L.K, Wilson, K.S.
Deposit date:2012-04-26
Release date:2013-05-08
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Degradation of Phytate by the 6-Phytase from Hafnia Alvei: A Combined Structural and Solution Study.
Plos One, 8, 2013
6HPF
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BU of 6hpf by Molmil
Structure of Inactive E165Q mutant of fungal non-CBM carrying GH26 endo-b-mannanase from Yunnania penicillata in complex with alpha-62-61-di-galactosyl-mannotriose
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETIC ACID, CHLORIDE ION, ...
Authors:von Freiesleben, P, Moroz, O.V, Blagova, E, Wiemann, M, Spodsberg, N, Agger, J.W, Davies, G.J, Wilson, K.S, Stalbrand, H, Meyer, A.S, Krogh, K.B.R.M.
Deposit date:2018-09-20
Release date:2019-03-06
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:Crystal structure and substrate interactions of an unusual fungal non-CBM carrying GH26 endo-beta-mannanase from Yunnania penicillata.
Sci Rep, 9, 2019
8QAK
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BU of 8qak by Molmil
Dispersin from Terribacillus saccharophilus DispTs3
Descriptor: ACETATE ION, Glycoside hydrolase family 20 catalytic domain-containing protein
Authors:Males, A, Moroz, O.V, Blagova, E, Munch, A, Hansen, G.H, Johansen, A.H, Ostergaard, L.H, Segura, D.R, Eddenden, A, Due, A.V, Gudmand, M, Salomon, J, Sorensen, S.R, Cairo, J.L.F, Pache, R.A, Vejborg, R.M, Davies, G.J, Wilson, K.S.
Deposit date:2023-08-22
Release date:2025-03-12
Last modified:2025-03-19
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Expansion of the diversity of dispersin scaffolds.
Acta Crystallogr D Struct Biol, 81, 2025
8QB6
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BU of 8qb6 by Molmil
Dispersin from Terribacillus saccharophilus DispTs2
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 6-ACETAMIDO-6-DEOXY-CASTANOSPERMINE, Dispersin
Authors:Males, A, Moroz, O.V, Blagova, E, Munch, A, Hansen, G.H, Johansen, A.H, Ostergaard, L.H, Segura, D.R, Eddenden, A, Due, A.V, Gudmand, M, Salomon, J, Sorensen, S.R, Cairo, J.L.F, Pache, R.A, Vejborg, R.M, Davies, G.J, Wilson, K.S.
Deposit date:2023-08-24
Release date:2025-03-12
Last modified:2025-03-19
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Expansion of the diversity of dispersin scaffolds.
Acta Crystallogr D Struct Biol, 81, 2025
8QCE
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BU of 8qce by Molmil
Dispersin from Lactiplantibacillus paraplantarum DispLp
Descriptor: 1,2-ETHANEDIOL, 6-ACETAMIDO-6-DEOXY-CASTANOSPERMINE, DI(HYDROXYETHYL)ETHER, ...
Authors:Males, A, Moroz, O.V, Blagova, E, Munch, A, Hansen, G.H, Johansen, A.H, Ostergaard, L.H, Segura, D.R, Eddenden, A, Due, A.V, Gudmand, M, Salomon, J, Sorensen, S.R, Cairo, J.L.F, Pache, R.A, Vejborg, R.M, Davies, G.J, Wilson, K.S.
Deposit date:2023-08-25
Release date:2025-03-12
Last modified:2025-03-19
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Expansion of the diversity of dispersin scaffolds.
Acta Crystallogr D Struct Biol, 81, 2025
5LWQ
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BU of 5lwq by Molmil
CeuE (H227L variant) a periplasmic protein from Campylobacter jejuni
Descriptor: BROMIDE ION, Enterochelin uptake periplasmic binding protein, SODIUM ION
Authors:Wilde, E.J, Blagova, E, Hughes, A, Raines, D.J, Moroz, O.V, Turkenburg, J.P, Duhme-Klair, A.-K, Wilson, K.S.
Deposit date:2016-09-19
Release date:2017-04-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Interactions of the periplasmic binding protein CeuE with Fe(III) n-LICAM(4-) siderophore analogues of varied linker length.
Sci Rep, 7, 2017
5LWH
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BU of 5lwh by Molmil
CeuE (Y288F variant) a periplasmic protein from Campylobacter jejuni.
Descriptor: Enterochelin ABC transporter substrate-binding protein, ZINC ION
Authors:Wilde, E.J, Blagova, E, Hughes, A, Raines, D.J, Moroz, O.V, Turkenburg, J, Duhme-Klair, A.-K, Wilson, K.S.
Deposit date:2016-09-16
Release date:2017-04-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Interactions of the periplasmic binding protein CeuE with Fe(III) n-LICAM(4-) siderophore analogues of varied linker length.
Sci Rep, 7, 2017
8QF2
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BU of 8qf2 by Molmil
Beta-L-Arabinofurano-cyclitol Aziridines are Cysteine-directed Broad-spectrum Inhibitors and Activity-based Probes for Retaining Beta-L-arabinofuranosidases
Descriptor: (1~{S},2~{S},3~{S},4~{R})-4-azanyl-3-(hydroxymethyl)cyclopentane-1,2-diol, Non-reducing end beta-L-arabinofuranosidase, ZINC ION
Authors:Borlandelli, V, Offen, W.A, Moroz, O, Nin-Hill, A, McGregor, N, Binkhorst, L, Armstrong, Z, Ishiwata, A, Artola, M, Rovira, C, Davies, G.J, Overkleeft, H.
Deposit date:2023-09-02
Release date:2023-12-13
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:beta-l- Arabino furano-cyclitol Aziridines Are Covalent Broad-Spectrum Inhibitors and Activity-Based Probes for Retaining beta-l-Arabinofuranosidases.
Acs Chem.Biol., 18, 2023
5MBU
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BU of 5mbu by Molmil
CeuE (H227A, Y288F variant) a periplasmic protein from Campylobacter jejuni
Descriptor: Enterochelin uptake periplasmic binding protein
Authors:Wilde, E.J, Blagova, E.V, Hughes, A, Raines, D.J, Moroz, O.V, Turkenburg, J.P, Duhme-Klair, A.-K, Wilson, K.S.
Deposit date:2016-11-08
Release date:2017-04-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Interactions of the periplasmic binding protein CeuE with Fe(III) n-LICAM(4-) siderophore analogues of varied linker length.
Sci Rep, 7, 2017
5MBQ
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BU of 5mbq by Molmil
CeuE (H227A variant) a periplasmic protein from Campylobacter jejuni
Descriptor: Enterochelin uptake periplasmic binding protein
Authors:Wilde, E.J, Blagova, E.V, Hughes, A, Raines, D.J, Moroz, O.V, Turkenburg, J.P, Duhme-Klair, A.-K, Wilson, K.S.
Deposit date:2016-11-08
Release date:2017-04-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.33 Å)
Cite:Interactions of the periplasmic binding protein CeuE with Fe(III) n-LICAM(4-) siderophore analogues of varied linker length.
Sci Rep, 7, 2017
6Q7I
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BU of 6q7i by Molmil
GH3 exo-beta-xylosidase (XlnD)
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Davies, G.J, Rowland, R.J, Wu, L, Moroz, O, Blagova, E.
Deposit date:2018-12-13
Release date:2019-06-05
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Dynamic and Functional Profiling of Xylan-Degrading Enzymes inAspergillusSecretomes Using Activity-Based Probes.
Acs Cent.Sci., 5, 2019
6Q7J
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BU of 6q7j by Molmil
GH3 exo-beta-xylosidase (XlnD) in complex with xylobiose aziridine activity based probe
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Davies, G.J, Rowland, R.J, Wu, L, Moroz, O, Blagova, E.
Deposit date:2018-12-13
Release date:2019-06-05
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Dynamic and Functional Profiling of Xylan-Degrading Enzymes inAspergillusSecretomes Using Activity-Based Probes.
Acs Cent.Sci., 5, 2019
7NSN
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BU of 7nsn by Molmil
Multi-domain GH92 alpha-1,2-mannosidase from Neobacillus novalis: mannoimidazole complex
Descriptor: (5R,6R,7S,8R)-5-(HYDROXYMETHYL)-5,6,7,8-TETRAHYDROIMIDAZO[1,2-A]PYRIDINE-6,7,8-TRIOL, 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, ...
Authors:Kolaczkowski, B.M, Moroz, O.V, Blagova, E, Davies, G.J, Wilson, K.S, Moeler, M.S, Meyer, A.S, Westh, P, Jensen, K, Krogh, K.B.R.M.
Deposit date:2021-03-08
Release date:2022-09-21
Last modified:2024-04-10
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Structural and functional characterization of a multi-domain GH92 alpha-1,2-mannosidase from Neobacillus novalis.
Acta Crystallogr D Struct Biol, 79, 2023
6FHV
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BU of 6fhv by Molmil
Crystal structure of Penicillium oxalicum Glucoamylase
Descriptor: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Roth, C, Moroz, O.V, Ariza, A, Friis, E.P, Davies, G.J, Wilson, K.S.
Deposit date:2018-01-15
Release date:2018-05-09
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural insight into industrially relevant glucoamylases: flexible positions of starch-binding domains.
Acta Crystallogr D Struct Biol, 74, 2018
9EP6
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BU of 9ep6 by Molmil
Alpha-Galactosaminidase family GH114 from Fusarium solani
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, alpha-galactosidase
Authors:Roth, C, Moroz, O.V, Miranda, S.A.D, Jahn, L, Blagova, E, Lebedev, A.A, Segura, D.R, Stringer, M.A, Friis, E.P, Davies, G.J, Wilson, K.S.
Deposit date:2024-03-17
Release date:2025-04-23
Last modified:2025-05-14
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Structures of alpha-galactosaminidases from the CAZy GH114 family and homologs defining a new GH191 family of glycosidases.
Acta Crystallogr D Struct Biol, 81, 2025
9FZ2
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BU of 9fz2 by Molmil
Crystal structure of Amylase 5 (Amy5) from Ruminococcus bromii covalently bound to alpha-1,6 branched pseudo-trisaccharide activity-based probe
Descriptor: (1~{S},4~{S},5~{R})-6-(hydroxymethyl)cyclohexane-1,2,3,4,5-pentol, 8-azanyloctan-1-ol, Alpha-amylase, ...
Authors:Pickles, I.B, Moroz, O, Davies, G.
Deposit date:2024-07-04
Release date:2024-12-11
Last modified:2025-02-05
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Precision Activity-Based alpha-Amylase Probes for Dissection and Annotation of Linear and Branched-Chain Starch-Degrading Enzymes.
Angew.Chem.Int.Ed.Engl., 64, 2025
9FZ0
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BU of 9fz0 by Molmil
Crystal structure of SusG from Bacteroides thetaiotaomicron covalently bound to alpha-1,6 branched pseudo-trisaccharide activity-based probe
Descriptor: (1~{R},2~{R},3~{S},4~{R},5~{R},6~{S})-5-(hydroxymethyl)-7-oxabicyclo[4.1.0]heptane-2,3,4-triol, (1~{S},4~{S},5~{R})-6-(hydroxymethyl)cyclohexane-1,2,3,4,5-pentol, ACETATE ION, ...
Authors:Pickles, I.B, Moroz, O, Davies, G.
Deposit date:2024-07-04
Release date:2024-12-11
Last modified:2025-02-05
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Precision Activity-Based alpha-Amylase Probes for Dissection and Annotation of Linear and Branched-Chain Starch-Degrading Enzymes.
Angew.Chem.Int.Ed.Engl., 64, 2025
9FZ3
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BU of 9fz3 by Molmil
Crystal structure of K38 amylase from Bacillus sp. strain KSM-K38 covalently bound to alpha-1,6 branched pseudo-trisaccharide activity-based probe
Descriptor: (1~{S},4~{S},5~{R})-6-(hydroxymethyl)cyclohexane-1,2,3,4,5-pentol, ACETATE ION, Amylase, ...
Authors:Pickles, I.B, Moroz, O, Davies, G.
Deposit date:2024-07-04
Release date:2024-12-11
Last modified:2025-02-05
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Precision Activity-Based alpha-Amylase Probes for Dissection and Annotation of Linear and Branched-Chain Starch-Degrading Enzymes.
Angew.Chem.Int.Ed.Engl., 64, 2025
9FYZ
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BU of 9fyz by Molmil
Crystal structure of SusA amylase from Bacteroides thetaiotaomicron covalently bound to alpha-1,6 branched pseudo-trisaccharide activity-based probe
Descriptor: (1~{S},4~{S},5~{R})-6-(hydroxymethyl)cyclohexane-1,2,3,4,5-pentol, CALCIUM ION, IMIDAZOLE, ...
Authors:Pickles, I.B, Moroz, O, Davies, G.
Deposit date:2024-07-04
Release date:2024-12-11
Last modified:2025-02-05
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Precision Activity-Based alpha-Amylase Probes for Dissection and Annotation of Linear and Branched-Chain Starch-Degrading Enzymes.
Angew.Chem.Int.Ed.Engl., 64, 2025
6Q8N
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BU of 6q8n by Molmil
GH10 endo-xylanase in complex with xylobiose epoxide inhibitor
Descriptor: (1~{R},2~{S},4~{S},5~{R})-cyclohexane-1,2,3,4,5-pentol, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Davies, G.J, Rowland, R.J, Wu, L, Moroz, O, Blagova, E.
Deposit date:2018-12-15
Release date:2019-06-05
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Dynamic and Functional Profiling of Xylan-Degrading Enzymes inAspergillusSecretomes Using Activity-Based Probes.
Acs Cent.Sci., 5, 2019
6Q8M
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BU of 6q8m by Molmil
GH10 endo-xylanase
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-xylanase, ...
Authors:Davies, G.J, Rowland, R.J, Wu, L, Moroz, O, Blagova, E.
Deposit date:2018-12-15
Release date:2019-06-05
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Dynamic and Functional Profiling of Xylan-Degrading Enzymes inAspergillusSecretomes Using Activity-Based Probes.
Acs Cent.Sci., 5, 2019
9EP5
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BU of 9ep5 by Molmil
GH191 family Alpha-Galactosaminidase from Environmental sample (99.2% identity to Myxococcus fulvus enzyme)
Descriptor: Glycoside-hydrolase family GH114 TIM-barrel domain-containing protein, SULFATE ION
Authors:Roth, C, Moroz, O.V, Miranda, S.A.D, Jahn, L, Blagova, E, Lebedev, A.A, Segura, D.R, Stringer, M.A, Friis, E.P, Davies, G.J, Wilson, K.S.
Deposit date:2024-03-17
Release date:2025-04-23
Last modified:2025-05-14
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Structures of alpha-galactosaminidases from the CAZy GH114 family and homologs defining a new GH191 family of glycosidases.
Acta Crystallogr D Struct Biol, 81, 2025
9HTA
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BU of 9hta by Molmil
Dispersin from Terribacillus saccharophilus Dispts2 in complex with NAG-thiazoline
Descriptor: 3AR,5R,6S,7R,7AR-5-HYDROXYMETHYL-2-METHYL-5,6,7,7A-TETRAHYDRO-3AH-PYRANO[3,2-D]THIAZOLE-6,7-DIOL, Dispersin
Authors:Males, A, Moroz, O.V, Blagova, E, Munch, A, Hansen, G.H, Johansen, A.H, Ostergaard, L.H, Segura, D.R, Eddenden, A, Due, A.V, Gudmand, M, Salomon, J, Sorensen, S.R, Franco Cairo, J.P.L, Pache, R.A, Vejborg, R.M, Bhosale, S, Vocadlo, D, Davies, G.J, Wilson, K.S.
Deposit date:2024-12-19
Release date:2025-03-12
Last modified:2025-03-19
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Expansion of the diversity of dispersin scaffolds.
Acta Crystallogr D Struct Biol, 81, 2025
5ADV
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BU of 5adv by Molmil
The Periplasmic Binding Protein CeuE of Campylobacter jejuni preferentially binds the iron(III) complex of the Linear Dimer Component of Enterobactin
Descriptor: 2-(2,3-DIHYDROXY-BENZOYLAMINO)-3-HYDROXY-PROPIONIC ACID, 2S-2-[(2,3-DIHYDROXYPHENYL)CARBONYLAMINO]-3-[(2S)-2-[(2,3-DIHYDROXYPHENYL)CARBONYLAMINO]-3-HYDROXY-PROPANOYL]OXY-PROPANOIC ACID, DIMETHYL SULFOXIDE, ...
Authors:Raines, D.J, Moroz, O.V, Turkenburg, J.P, Wilson, K.S, Duhme-Klair, A.K.
Deposit date:2015-08-24
Release date:2016-05-25
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Bacteria in an Intense Competition for Iron: Key Component of the Campylobacter Jejuni Iron Uptake System Scavenges Enterobactin Hydrolysis Product.
Proc.Natl.Acad.Sci.USA, 113, 2016

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PDB entries from 2025-05-14

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