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PDB: 27 results

8FVV
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BU of 8fvv by Molmil
Rubrerythrin from B. pseudomallei: iron-bound
Descriptor: FE (III) ION, Rubrerythrin
Authors:Monteiro, D.C.F, Snell, M.E, Budziszewski, G.R, Bowman, S.E.J.
Deposit date:2023-01-19
Release date:2024-01-31
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Rubrerythrin from B. pseudomallei: iron-bound
To Be Published
8FXD
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BU of 8fxd by Molmil
Rubrerythrin from B. pseudomallei: manganese-bound
Descriptor: DI(HYDROXYETHYL)ETHER, MANGANESE (II) ION, Rubrerythrin
Authors:Monteiro, D.C.F, Snell, M.E, Budziszewski, G.R, Bowman, S.E.J.
Deposit date:2023-01-24
Release date:2024-02-07
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Rubrerythrin from B. pseudomallei: manganese-bound
To Be Published
8FUH
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BU of 8fuh by Molmil
Rubrerythrin from B. pseudomallei: apo form
Descriptor: DI(HYDROXYETHYL)ETHER, Rubrerythrin
Authors:Monteiro, D.C.F, Snell, M.E, Budziszewski, G.R, Bowman, S.E.J.
Deposit date:2023-01-17
Release date:2024-01-31
Method:X-RAY DIFFRACTION (1.852 Å)
Cite:Rubrerythrin from B. pseudomallei: apo form
To Be Published
7TPS
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BU of 7tps by Molmil
Crystal structure of ALPN-202 (engineered CD80 vIgD) in complex with PD-L1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Demonte, D.W, Maurer, M.F, Akutsu, M, Kimbung, Y.R, Logan, D.T, Walse, B.
Deposit date:2022-01-26
Release date:2022-03-16
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:The engineered CD80 variant fusion therapeutic davoceticept combines checkpoint antagonism with conditional CD28 costimulation for anti-tumor immunity.
Nat Commun, 13, 2022
6RXH
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BU of 6rxh by Molmil
In-flow serial synchrotron crystallography using a 3D-printed microfluidic device (3D-MiXD): Aspartate alpha-decarboxylase
Descriptor: Aspartate 1-decarboxylase, UNKNOWN ATOM OR ION
Authors:Monteiro, D.C.F, von Stetten, D, Pearson, A.R, Trebbin, M.
Deposit date:2019-06-08
Release date:2020-03-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:3D-MiXD: 3D-printed X-ray-compatible microfluidic devices for rapid, low-consumption serial synchrotron crystallography data collection in flow.
Iucrj, 7, 2020
6RXI
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BU of 6rxi by Molmil
In-flow serial synchrotron crystallography using a 3D-printed microfluidic device (3D-MiXD): Lysozyme
Descriptor: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, Lysozyme C, ...
Authors:Monteiro, D.C.F, von Stetten, D, Pearson, A.R, Trebbin, M.
Deposit date:2019-06-08
Release date:2020-03-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:3D-MiXD: 3D-printed X-ray-compatible microfluidic devices for rapid, low-consumption serial synchrotron crystallography data collection in flow.
Iucrj, 7, 2020
5LS7
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BU of 5ls7 by Molmil
Complex of wild type E. coli alpha aspartate decarboxylase with its processing factor PanZ
Descriptor: ACETYL COENZYME *A, Aspartate 1-decarboxylase, CARBON DIOXIDE, ...
Authors:Monteiro, D.C.F, Webb, M.E, Pearson, A.R.
Deposit date:2016-08-22
Release date:2017-09-13
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.16 Å)
Cite:The Mechanism of Regulation of Pantothenate Biosynthesis by the PanD-PanZAcCoA Complex Reveals an Additional Mode of Action for the Antimetabolite N-Pentyl Pantothenamide (N5-Pan).
Biochemistry, 56, 2017
6H79
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BU of 6h79 by Molmil
SSX structure of Lysozyme in flow - metal-kapton microfluidic device
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, CHLORIDE ION, ...
Authors:Monteiro, D.C.F, Trebbin, M.
Deposit date:2018-07-30
Release date:2019-03-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A microfluidic flow-focusing device for low sample consumption serial synchrotron crystallography experiments in liquid flow.
J.Synchrotron Radiat., 26, 2019
4CRZ
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BU of 4crz by Molmil
Direct visualisation of strain-induced protein prost-translational modification
Descriptor: ACETYL COENZYME *A, ASPARTATE 1-DECARBOXYLASE, MAGNESIUM ION, ...
Authors:Monteiro, D.C.F, Patel, V, Bartlett, C.P, Grant, T.D, Nozaki, S, Gowdy, J.A, Snell, E.H, Niki, H, Pearson, A.R, Webb, M.E.
Deposit date:2014-03-02
Release date:2015-03-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The Structure of the Pand/Panz Protein Complex Reveals Negative Feedback Regulation of Pantothenate Biosynthesis by Coenzyme A.
Chem.Biol., 22, 2015
4CS0
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BU of 4cs0 by Molmil
Direct visualisation of strain-induced protein post-translational modification
Descriptor: ACETYL COENZYME *A, ASPARTATE 1-DECARBOXYLASE, MAGNESIUM ION, ...
Authors:Monteiro, D.C.F, Patel, V, Bartlett, C.P, Grant, T.D, Nozaki, S, Gowdy, J.A, Snell, E.H, Niki, H, Pearson, A.R, Webb, M.E.
Deposit date:2014-03-02
Release date:2015-03-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The Structure of the Pand/Panz Protein Complex Reveals Negative Feedback Regulation of Pantothenate Biosynthesis by Coenzyme A.
Chem.Biol., 22, 2015
4CRY
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BU of 4cry by Molmil
Direct visualisation of strain-induced protein post-translational modification
Descriptor: ACETYL COENZYME *A, ASPARTATE 1-DECARBOXYLASE, CHLORIDE ION, ...
Authors:Monteiro, D.C.F, Patel, V, Bartlett, C.P, Grant, T.D, Nozaki, S, Gowdy, J.A, Snell, E.H, Niki, H, Pearson, A.R, Webb, M.E.
Deposit date:2014-03-02
Release date:2015-03-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Direct Visualisation of Strain-Induced Protein Post-Translational Modification
To be Published
4JNJ
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BU of 4jnj by Molmil
Structure based engineering of streptavidin monomer with a reduced biotin dissociation rate
Descriptor: BIOTIN, Streptavidin/Rhizavidin Hybrid, ZINC ION
Authors:DeMonte, D, Drake, E.J, Hong Lim, K, Gulick, A.M, Park, S.
Deposit date:2013-03-15
Release date:2013-05-29
Last modified:2013-11-13
Method:X-RAY DIFFRACTION (1.902 Å)
Cite:Structure-based engineering of streptavidin monomer with a reduced biotin dissociation rate.
Proteins, 81, 2013
5A4P
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BU of 5a4p by Molmil
Structure of UBE2Z provides functional insight into specificity in the FAT10 conjugation machinery
Descriptor: DI(HYDROXYETHYL)ETHER, MALONATE ION, UBIQUITIN-CONJUGATING ENZYME E2 Z
Authors:Schelpe, J, Monte, D, Dewitte, F, Sixma, T.K, Rucktooa, P.
Deposit date:2015-06-11
Release date:2015-11-18
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of Ube2Z Provides Functional Insight Into Specificity in the Fat10 Conjugation Machinery
J.Biol.Chem., 291, 2016
6H02
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BU of 6h02 by Molmil
Crystal structure of human Mediator subunit MED23
Descriptor: LAMA nanobody NB106, Mediator of RNA polymerase II transcription subunit 23
Authors:Clantin, B, Monte, D, Villeret, V.
Deposit date:2018-07-06
Release date:2018-08-29
Last modified:2018-09-05
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of human Mediator subunit MED23.
Nat Commun, 9, 2018
6HUE
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BU of 6hue by Molmil
ParkinS65N
Descriptor: CHLORIDE ION, E3 ubiquitin-protein ligase parkin, GLYCEROL, ...
Authors:McWilliams, T.G, Barini, E, Pohjolan-Pirhonen, R, Brooks, S.P, Singh, F, Burel, S, Balk, K, Kumar, A, Montava-Garriga, L, Prescott, A.R, Hassoun, S.M, Mouton-Liger, F, Ball, G, Hills, R, Knebel, A, Ulusoy, A, Di Monte, D.A, Tamjar, J, Antico, O, Fears, K, Smith, L, Brambilla, R, Palin, E, Valori, M, Eerola-Rautio, J, Tienari, P, Corti, O, Dunnett, S.B, Ganley, I.G, Suomalainen, A, Muqit, M.M.K.
Deposit date:2018-10-07
Release date:2018-10-17
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Phosphorylation of Parkin at serine 65 is essential for its activation in vivo .
Open Biology, 8, 2018
2L23
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BU of 2l23 by Molmil
NMR structure of the ACID (ACtivator Interacting Domain) of the human mediator Med25 protein
Descriptor: Mediator of RNA polymerase II transcription subunit 25
Authors:Bontems, F, Monte, D, Dewitte, F, Villeret, V.
Deposit date:2010-08-10
Release date:2010-11-24
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:NMR structure of the human Mediator MED25 ACID domain.
J.Struct.Biol., 174, 2011
7NEV
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BU of 7nev by Molmil
Structure of the hemiacetal complex between the SARS-CoV-2 Main Protease and Leupeptin
Descriptor: 3C-like proteinase, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
Authors:Guenther, S, Reinke, P.Y.A, Oberthuer, D, Yefanov, O, Gelisio, L, Ginn, H.M, Lieske, J, Domaracky, M, Brehm, W, Rahmani Mashhour, A, White, T.A, Knoska, J, Pena Esperanza, G, Koua, F, Tolstikova, A, Groessler, M, Fischer, P, Hennicke, V, Fleckenstein, H, Trost, F, Galchenkova, M, Gevorkov, Y, Li, C, Awel, S, Xavier, P.L, Ullah, N, Andaleeb, H, Falke, S, Alves Franca, B, Schwinzer, M, Brognaro, H, Werner, N, Perbandt, M, Tidow, H, Seychell, B, Beck, T, Meier, S, Zaitsev-Doyle, J.J, Rogers, C, Gieseler, H, Melo, D, Monteiro, D.C.F, Dunkel, I, Lane, T.J, Peck, A, Saouane, S, Hakanpaeae, J, Meyer, J, Noei, H, Gribbon, P, Ellinger, B, Kuzikov, M, Wolf, M, Zhang, L, Ehrt, C, Pletzer-Zelgert, J, Wollenhaupt, J, Feiler, C, Weiss, M, Schluenzen, F, Schulz, E.C, Mehrabi, P, Norton-Baker, B, Schmidt, C, Lorenzen, K, Schubert, R, Sun, X, Han, H, Chari, A, Fernandez Garcia, Y, Turk, D, Hilgenfeld, R, Rarey, M, Zaliani, A, Chapman, H.N, Pearson, A, Betzel, C, Meents, A.
Deposit date:2021-02-05
Release date:2021-03-03
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:X-ray screening identifies active site and allosteric inhibitors of SARS-CoV-2 main protease.
Science, 372, 2021
7ADQ
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BU of 7adq by Molmil
Serial Laue crystallography structure of dehaloperoxidase B from Amphitrite ornata
Descriptor: Dehaloperoxidase B, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:Moreno-Chicano, T.M, Ebrahim, A.E, Srajer, V, Henning, R.W, Doak, B.C, Trebbin, M, Monteiro, D.C.F, Hough, M.A.
Deposit date:2020-09-15
Release date:2021-11-03
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Complementarity of neutron, XFEL and synchrotron crystallography for defining the structures of metalloenzymes at room temperature.
Iucrj, 9, 2022
5DD1
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BU of 5dd1 by Molmil
Crystal structures in an anti-HIV antibody lineage from immunization of Rhesus macaques
Descriptor: ANTI-HIV ANTIBODY DH570 FAB HEAVY CHAIN, ANTI-HIV ANTIBODY DH570 FAB LIGHT CHAIN
Authors:Zhang, R, Verkoczy, L, Wiehe, K, Alam, S.M, Nicely, N.I, Santra, S, Bradley, T, Pemble, C, Gao, F, Montefiori, D.C, Bouton-Verville, H, Kelsoe, G, Parks, R, Foulger, A, Tomaras, G, Keple, T.B, Moody, M.A, Liao, H.-X, Haynes, B.F.
Deposit date:2015-08-24
Release date:2016-05-11
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.597 Å)
Cite:Initiation of immune tolerance-controlled HIV gp41 neutralizing B cell lineages.
Sci Transl Med, 8, 2016
5DD0
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BU of 5dd0 by Molmil
Crystal structures in an anti-HIV antibody lineage from immunization of Rhesus macaques
Descriptor: ANTI-HIV ANTIBODY DH570 FAB HEAVY CHAIN, ANTI-HIV ANTIBODY DH570 FAB HEAVY LIGHT, oligo peptide
Authors:Zhang, R, Verkoczy, L, Wiehe, K, Alam, S.M, Nicely, N.I, Santra, S, Bradley, T, Pemble, C, Gao, F, Montefiori, D.C, Bouton-Verville, H, Kelsoe, G, Parks, R, Foulger, A, Tomaras, G, Keple, T.B, Moody, M.A, Liao, H.-X, Haynes, B.F.
Deposit date:2015-08-24
Release date:2016-05-11
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.488 Å)
Cite:Initiation of immune tolerance-controlled HIV gp41 neutralizing B cell lineages.
Sci Transl Med, 8, 2016
4QF1
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BU of 4qf1 by Molmil
Crystal structure of unliganded CH59UA, the inferred unmutated ancestor of the RV144 anti-HIV antibody lineage producing CH59
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CH59UA Fab fragment of heavy chain, CHLORIDE ION, ...
Authors:Wiehe, K, Easterhoff, D, Luo, K, Nicely, N.I, Bradley, T, Jaeger, F.H, Dennison, S.M, Zhang, R, Lloyd, K.E, Stolarchuk, C, Parks, R, Sutherland, L.L, Scearce, R.M, Morris, L, Kaewkungwal, J, Nitayaphan, S, Pitisuttithum, P, Rerks-Ngarm, S, Michael, N, Kim, J, Kelsoe, G, Montefiori, D.C, Tomaras, G, Bonsignori, M, Santra, S, Kepler, T.B, Alam, S.M, Moody, M.A, Liao, H.-X, Haynes, B.F.
Deposit date:2014-05-19
Release date:2015-02-18
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Antibody Light-Chain-Restricted Recognition of the Site of Immune Pressure in the RV144 HIV-1 Vaccine Trial Is Phylogenetically Conserved.
Immunity, 41, 2014
4AOK
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BU of 4aok by Molmil
Conformational dynamics of aspartate alpha-decarboxylase active site revealed by protein-ligand complexes: 1-methyl-L-aspartate complex
Descriptor: ASPARTATE 1-DECARBOXYLASE ALPHA CHAIN, ASPARTATE 1-DECARBOXYLASE BETA CHAIN
Authors:Yorke, B.A, Monteiro, D.C.F, Pearson, A.R, Webb, M.E.
Deposit date:2012-03-28
Release date:2012-10-31
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Conformational Dynamics of Aspartate Alpha Decarboxylase Active Site Revealed by Protein-Ligand Complexes
To be Published
4AON
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BU of 4aon by Molmil
Conformational dynamics of aspartate alpha-decarboxylase active site revealed by protein-ligand complexes: 1-methyl-L-aspartate complex
Descriptor: ASPARTATE-ALPHA-DECARBOXYLASE ALPHA CHAIN, ASPARTATE-ALPHA-DECARBOXYLASE BETA CHAIN, GLUTAMIC ACID
Authors:Yorke, B.A, Monteiro, D.C.F, Pearson, A.R, Webb, M.E.
Deposit date:2012-03-29
Release date:2012-10-31
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Conformational Dynamics of Aspartate Alpha Decarboxylase Active Site Revealed by Protein-Ligand Complexes
To be Published
4D7Z
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BU of 4d7z by Molmil
E. coli L-aspartate-alpha-decarboxylase mutant N72Q to a resolution of 1.9 Angstroms
Descriptor: ASPARTATE 1-DECARBOXYLASE ALPHA CHAIN, ASPARTATE 1-DECARBOXYLASE BETA CHAIN, DI(HYDROXYETHYL)ETHER, ...
Authors:Bravo, J.P.K, Monteiro, D.C.F, Webb, M.E, Pearson, A.R.
Deposit date:2014-12-02
Release date:2016-01-13
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The Structure of the E. Coli L-Aspartate-Alpha-Decarboxylase Mutant N72Q to a Resolution of 1.9 Angstroms
To be Published
3CL8
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BU of 3cl8 by Molmil
Crystal structure of Puue Allantoinase complexed with ACA
Descriptor: 5-amino-1H-imidazole-4-carboxamide, Puue Allantoinase
Authors:Ramazzina, I, Cendron, L, Folli, C, Berni, R, Monteverdi, D, Zanotti, G, Percudani, R.
Deposit date:2008-03-18
Release date:2008-06-10
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Logical identification of an allantoinase analog (puuE) recruited from polysaccharide deacetylases
J.Biol.Chem., 283, 2008

 

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