Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 52 件

1DEF
DownloadVisualize
BU of 1def by Molmil
PEPTIDE DEFORMYLASE CATALYTIC CORE (RESIDUES 1-147), NMR, 9 STRUCTURES
分子名称: PEPTIDE DEFORMYLASE, ZINC ION
著者Meinnel, T, Dardel, F.
登録日1996-03-19
公開日1997-04-21
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献A new subclass of the zinc metalloproteases superfamily revealed by the solution structure of peptide deformylase.
J.Mol.Biol., 262, 1996
2DEF
DownloadVisualize
BU of 2def by Molmil
PEPTIDE DEFORMYLASE CATALYTIC CORE (RESIDUES 1-147), NMR, 20 STRUCTURES
分子名称: NICKEL (II) ION, PEPTIDE DEFORMYLASE
著者Meinnel, T, Dardel, F.
登録日1997-12-15
公開日1998-03-18
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structure of nickel-peptide deformylase.
J.Mol.Biol., 280, 1998
6SJZ
DownloadVisualize
BU of 6sjz by Molmil
HsNMT1 in complex with both MyrCoA and Acetylated-GNCFSKPR substrates
分子名称: Apoptosis-inducing factor 3, CHLORIDE ION, GLYCEROL, ...
著者Dian, C, Riviere, F.B, Asensio, T, Giglione, C, Meinnel, T.
登録日2019-08-14
公開日2020-03-18
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.995 Å)
主引用文献High-resolution snapshots of human N-myristoyltransferase in action illuminate a mechanism promoting N-terminal Lys and Gly myristoylation.
Nat Commun, 11, 2020
6QRM
DownloadVisualize
BU of 6qrm by Molmil
HsNMT1 in complex with both MyrCoA and GNCFSKRRAA substrates
分子名称: Apoptosis-inducing factor 3, CHLORIDE ION, COENZYME A, ...
著者Dian, C, Riviere, F.B, Asensio, T, Giglione, C, Meinnel, T.
登録日2019-02-19
公開日2020-03-18
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献High-resolution snapshots of human N-myristoyltransferase in action illuminate a mechanism promoting N-terminal Lys and Gly myristoylation.
Nat Commun, 11, 2020
6SK3
DownloadVisualize
BU of 6sk3 by Molmil
C-terminal HsNMT1 deltaC3 truncation in complex with both MyrCoA and GNCFSKPR substrates
分子名称: Apoptosis-inducing factor 3, GLYCEROL, Glycylpeptide N-tetradecanoyltransferase 1, ...
著者Dian, C, Riviere, F.B, Asensio, T, Giglione, C, Meinnel, T.
登録日2019-08-14
公開日2020-03-18
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献High-resolution snapshots of human N-myristoyltransferase in action illuminate a mechanism promoting N-terminal Lys and Gly myristoylation.
Nat Commun, 11, 2020
6SK2
DownloadVisualize
BU of 6sk2 by Molmil
HsNMT1 in complex with both MyrCoA and Acetylated-GKSFSKPR peptide reveals N-terminal Lysine Myristoylation
分子名称: Apoptosis-inducing factor 3, COENZYME A, GLYCEROL, ...
著者Dian, C, Riviere, F.B, Asensio, T, Giglione, C, Meinnel, T.
登録日2019-08-14
公開日2020-03-18
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.90000653 Å)
主引用文献High-resolution snapshots of human N-myristoyltransferase in action illuminate a mechanism promoting N-terminal Lys and Gly myristoylation.
Nat Commun, 11, 2020
6SKJ
DownloadVisualize
BU of 6skj by Molmil
DeltaC2 C-terminal truncation of HsNMT1 in complex with MyrCoA and GNCFSKPR substrates
分子名称: Apoptosis-inducing factor 3, COENZYME A, GLYCEROL, ...
著者Dian, C, Riviere, F.B, Asensio, T, Giglione, C, Meinnel, T.
登録日2019-08-15
公開日2020-03-18
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献High-resolution snapshots of human N-myristoyltransferase in action illuminate a mechanism promoting N-terminal Lys and Gly myristoylation.
Nat Commun, 11, 2020
6SK8
DownloadVisualize
BU of 6sk8 by Molmil
DeltaC3 C-terminal truncation of HsNMT1 in complex with MyrCoA and GDCFSKPR substrates
分子名称: Apoptosis-inducing factor 3, CHLORIDE ION, GLYCEROL, ...
著者Dian, C, Riviere, F.B, Asensio, T, Giglione, C, Meinnel, T.
登録日2019-08-14
公開日2020-03-18
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献High-resolution snapshots of human N-myristoyltransferase in action illuminate a mechanism promoting N-terminal Lys and Gly myristoylation.
Nat Commun, 11, 2020
5MTE
DownloadVisualize
BU of 5mte by Molmil
Crystal structure of PDF from the Vibrio parahaemolyticus bacteriophage VP16T in complex with actinonin - crystal form II
分子名称: ACTINONIN, NICKEL (II) ION, Putative uncharacterized protein orf60T, ...
著者Fieulaine, S, Grzela, R, Giglione, C, Meinnel, T.
登録日2017-01-09
公開日2017-11-29
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Peptide deformylases from Vibrio parahaemolyticus phage and bacteria display similar deformylase activity and inhibitor binding clefts.
Biochim. Biophys. Acta, 1866, 2018
5MTD
DownloadVisualize
BU of 5mtd by Molmil
Crystal structure of PDF from the Vibrio parahaemolyticus bacteriophage VP16T - crystal form II
分子名称: NICKEL (II) ION, Putative uncharacterized protein orf60T, TRIETHYLENE GLYCOL, ...
著者Fieulaine, S, Grzela, R, Giglione, C, Meinnel, T.
登録日2017-01-09
公開日2017-09-20
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献The C-terminal residue of phage Vp16 PDF, the smallest peptide deformylase, acts as an offset element locking the active conformation.
Sci Rep, 7, 2017
5MTC
DownloadVisualize
BU of 5mtc by Molmil
Crystal structure of PDF from the Vibrio parahaemolyticus bacteriophage VP16T - crystal form I
分子名称: NICKEL (II) ION, Putative uncharacterized protein orf60T, ZINC ION
著者Fieulaine, S, Grzela, R, Giglione, C, Meinnel, T.
登録日2017-01-09
公開日2017-09-20
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献The C-terminal residue of phage Vp16 PDF, the smallest peptide deformylase, acts as an offset element locking the active conformation.
Sci Rep, 7, 2017
4JE7
DownloadVisualize
BU of 4je7 by Molmil
Crystal structure of a human-like mitochondrial peptide deformylase in complex with actinonin
分子名称: ACTINONIN, Peptide deformylase 1A, chloroplastic/mitochondrial, ...
著者Fieulaine, S, Meinnel, T, Giglione, C.
登録日2013-02-26
公開日2014-02-26
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Understanding the highly efficient catalysis of prokaryotic peptide deformylases by shedding light on the determinants specifying the low activity of the human counterpart.
Acta Crystallogr.,Sect.D, 70, 2014
4JE6
DownloadVisualize
BU of 4je6 by Molmil
Crystal structure of a human-like mitochondrial peptide deformylase
分子名称: Peptide deformylase 1A, chloroplastic/mitochondrial, ZINC ION
著者Fieulaine, S, Meinnel, T, Giglione, C.
登録日2013-02-26
公開日2014-02-26
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Understanding the highly efficient catalysis of prokaryotic peptide deformylases by shedding light on the determinants specifying the low activity of the human counterpart.
Acta Crystallogr.,Sect.D, 70, 2014
4JE8
DownloadVisualize
BU of 4je8 by Molmil
Crystal structure of a human-like mitochondrial peptide deformylase in complex with Met-Ala-Ser
分子名称: Peptide deformylase 1A, chloroplastic/mitochondrial, ZINC ION, ...
著者Fieulaine, S, Meinnel, T, Giglione, C.
登録日2013-02-26
公開日2014-02-26
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Understanding the highly efficient catalysis of prokaryotic peptide deformylases by shedding light on the determinants specifying the low activity of the human counterpart.
Acta Crystallogr.,Sect.D, 70, 2014
1ZXZ
DownloadVisualize
BU of 1zxz by Molmil
X-ray structure of peptide deformylase from Arabidopsis thaliana (AtPDF1A); crystals grown in PEG-5000 MME as precipitant
分子名称: Peptide deformylase, mitochondrial, ZINC ION
著者Fieulaine, S, Juillan-Binard, C, Serero, A, Dardel, F, Giglione, C, Meinnel, T, Ferrer, J.-L.
登録日2005-06-09
公開日2005-09-27
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献The crystal structure of mitochondrial (Type 1A) peptide deformylase provides clear guidelines for the design of inhibitors specific for the bacterial forms
J.Biol.Chem., 280, 2005
1ZY0
DownloadVisualize
BU of 1zy0 by Molmil
X-ray structure of peptide deformylase from Arabidopsis thaliana (AtPDF1A); crystals grown in PEG-6000
分子名称: Peptide deformylase, mitochondrial, ZINC ION
著者Fieulaine, S, Juillan-Binard, C, Serero, A, Dardel, F, Giglione, C, Meinnel, T, Ferrer, J.-L.
登録日2005-06-09
公開日2005-09-27
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献The crystal structure of mitochondrial (Type 1A) peptide deformylase provides clear guidelines for the design of inhibitors specific for the bacterial forms
J.Biol.Chem., 280, 2005
1ZY1
DownloadVisualize
BU of 1zy1 by Molmil
X-ray structure of peptide deformylase from Arabidopsis thaliana (AtPDF1A) in complex with Met-Ala-Ser
分子名称: Peptide deformylase, mitochondrial, ZINC ION, ...
著者Fieulaine, S, Juillan-Binard, C, Serero, A, Dardel, F, Giglione, C, Meinnel, T, Ferrer, J.-L.
登録日2005-06-09
公開日2005-09-27
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献The crystal structure of mitochondrial (Type 1A) peptide deformylase provides clear guidelines for the design of inhibitors specific for the bacterial forms
J.Biol.Chem., 280, 2005
3M6Q
DownloadVisualize
BU of 3m6q by Molmil
Crystal structure of Arabidopsis thaliana peptide deformylase 1B (AtPDF1B) G41Q mutant in complex with actinonin
分子名称: ACTINONIN, Peptide deformylase 1B, ZINC ION
著者Fieulaine, S, Meinnel, T, Giglione, C.
登録日2010-03-16
公開日2011-03-30
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Trapping conformational states along ligand-binding dynamics of peptide deformylase: the impact of induced fit on enzyme catalysis
Plos Biol., 9, 2011
3M6P
DownloadVisualize
BU of 3m6p by Molmil
Crystal structure of Arabidopsis thaliana peptide deformylase 1B (AtPDF1B) in complex with actinonin
分子名称: ACTINONIN, Peptide deformylase 1B, ZINC ION
著者Fieulaine, S, Meinnel, T, Giglione, C.
登録日2010-03-16
公開日2011-03-30
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Trapping conformational states along ligand-binding dynamics of peptide deformylase: the impact of induced fit on enzyme catalysis
Plos Biol., 9, 2011
3M6O
DownloadVisualize
BU of 3m6o by Molmil
Crystal structure of Arabidopsis thaliana peptide deformylase 1B (AtPDF1B)
分子名称: Peptide deformylase 1B, ZINC ION
著者Fieulaine, S, Meinnel, T, Giglione, C.
登録日2010-03-16
公開日2011-03-30
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Trapping conformational states along ligand-binding dynamics of peptide deformylase: the impact of induced fit on enzyme catalysis
Plos Biol., 9, 2011
3M6R
DownloadVisualize
BU of 3m6r by Molmil
Crystal structure of Arabidopsis thaliana peptide deformylase 1B (AtPDF1B) G41M mutant in complex with actinonin
分子名称: ACTINONIN, Peptide deformylase 1B, ZINC ION
著者Fieulaine, S, Meinnel, T, Giglione, C.
登録日2010-03-16
公開日2011-03-30
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Trapping conformational states along ligand-binding dynamics of peptide deformylase: the impact of induced fit on enzyme catalysis
Plos Biol., 9, 2011
1LRY
DownloadVisualize
BU of 1lry by Molmil
Crystal Structure of P. aeruginosa Peptide Deformylase Complexed with Antibiotic Actinonin
分子名称: ACTINONIN, PEPTIDE deformylase, ZINC ION
著者Guilloteau, J.-P, Mathieu, M, Giglione, C, Blanc, V, Dupuy, A, Chevrier, M, Gil, P, Famechon, A, Meinnel, T, Mikol, V.
登録日2002-05-16
公開日2002-07-24
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献The crystal structures of four peptide deformylases bound to the antibiotic actinonin reveal two distinct types: a platform for the structure-based design of antibacterial agents.
J.Mol.Biol., 320, 2002
7OWP
DownloadVisualize
BU of 7owp by Molmil
HsNMT1 in complex with both MyrCoA and ACE-G-(L-ORN)SFSKPR
分子名称: ACE-GLY-ORN-SER-PHE-SER-LYS-PRO-ARG, GLYCEROL, Glycylpeptide N-tetradecanoyltransferase 1, ...
著者Dian, C, Giglione, C, Meinnel, T.
登録日2021-06-18
公開日2022-12-21
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Structural and Large-scale Analysis Unveil the Intertwined Paths Promoting NMT-catalyzed Lysine and Glycine Myristoylation.
J.Mol.Biol., 434, 2022
7OWR
DownloadVisualize
BU of 7owr by Molmil
HsNMT1 in complex with both MyrCoA and peptide GGKSFSKPR
分子名称: GLY-GLY-LYS-SER-PHE-SER-LYS-PRO-ARG, GLYCEROL, Glycylpeptide N-tetradecanoyltransferase 1, ...
著者Dian, C, Giglione, C, Meinnel, T.
登録日2021-06-18
公開日2022-12-21
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.39 Å)
主引用文献Structural and Large-scale Analysis Unveil the Intertwined Paths Promoting NMT-catalyzed Lysine and Glycine Myristoylation.
J.Mol.Biol., 434, 2022
7OWQ
DownloadVisualize
BU of 7owq by Molmil
HsNMT1 in complex with both MyrCoA and peptide N-Methylated-GNCFSKPR
分子名称: Glycylpeptide N-tetradecanoyltransferase 1, MGY-ASN-CYS-PHE-SER-LYS-PRO-ARG, TETRADECANOYL-COA
著者Dian, C, Giglione, C, Meinnel, T.
登録日2021-06-18
公開日2022-12-21
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural and Large-scale Analysis Unveil the Intertwined Paths Promoting NMT-catalyzed Lysine and Glycine Myristoylation.
J.Mol.Biol., 434, 2022

 

123>

222926

件を2024-07-24に公開中

PDB statisticsPDBj update infoContact PDBjnumon