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PDB: 421 results

1KVP
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BU of 1kvp by Molmil
STRUCTURAL ANALYSIS OF THE SPIROPLASMA VIRUS, SPV4, IMPLICATIONS FOR EVOLUTIONARY VARIATION TO OBTAIN HOST DIVERSITY AMONG THE MICROVIRIDAE, ELECTRON MICROSCOPY, ALPHA CARBONS ONLY
Descriptor: SPV4 CAPSID PROTEIN VP1
Authors:McKenna, R.
Deposit date:1997-12-12
Release date:1999-02-23
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (27 Å)
Cite:Structural analysis of the Spiroplasma virus, SpV4: implications for evolutionary variation to obtain host diversity among the Microviridae.
Structure, 6, 1998
8UGQ
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BU of 8ugq by Molmil
CryoEM Structure of Maize Streak Virus (MSV) - Geminivirus
Descriptor: Capsid protein, DNA (5'-D(P*CP*GP*AP*AP*CP*CP*CP*CP*A)-3')
Authors:McKenna, R, Bennett, A.B, Mietzsch, M, Hull, J.A.
Deposit date:2023-10-05
Release date:2023-11-22
Method:ELECTRON MICROSCOPY (3.17 Å)
Cite:The two states of Maize Streak Virus (MSV) Geminivirus Architecture
To Be Published
2BPA
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BU of 2bpa by Molmil
ATOMIC STRUCTURE OF SINGLE-STRANDED DNA BACTERIOPHAGE PHIX174 AND ITS FUNCTIONAL IMPLICATIONS
Descriptor: DNA (5'-D(*AP*AP*AP*AP*C)-3'), PROTEIN (SUBUNIT OF BACTERIOPHAGE PHIX174)
Authors:McKenna, R, Xia, D, Willingmann, P, Ilag, L.L, Krishnaswamy, S, Rossmann, M.G, Olson, N.H, Baker, T.S, Incardona, N.L.
Deposit date:1991-12-03
Release date:1991-12-03
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3 Å)
Cite:Atomic structure of single-stranded DNA bacteriophage phi X174 and its functional implications.
Nature, 355, 1992
5JN3
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BU of 5jn3 by Molmil
Carbonic Anhydrase IX-mimic IN Complex WITH U-F
Descriptor: 4-{[(4-fluorophenyl)carbamoyl]amino}benzenesulfonamide, Carbonic anhydrase 2, DIMETHYL SULFOXIDE, ...
Authors:McKenna, R, Mboge, M.Y, Mahon, B.P.
Deposit date:2016-04-29
Release date:2017-05-03
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Carbonic Anhydrase IX-mimic IN Complex WITH U-F
To Be Published
5JN7
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BU of 5jn7 by Molmil
Carbonic Anhydrase II In Complex WITH U-CH3
Descriptor: 4-{[(3,5-dimethylphenyl)carbamoyl]amino}benzene-1-sulfonamide, Carbonic anhydrase 2, DIMETHYL SULFOXIDE, ...
Authors:McKenna, R, Mboge, M.Y, Mahon, B.P.
Deposit date:2016-04-29
Release date:2017-05-03
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.517 Å)
Cite:Carbonic Anhydrase II In Complex WITH U-CH3
To Be Published
5JMZ
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BU of 5jmz by Molmil
Carbonic Anhydrase IX-mimic IN Complex WITH U-NO2
Descriptor: 4-{[(3-nitrophenyl)carbamoyl]amino}benzenesulfonamide, Carbonic anhydrase 2, DIMETHYL SULFOXIDE, ...
Authors:McKenna, R, Mboge, M.Y, Mahon, B.P.
Deposit date:2016-04-29
Release date:2017-05-03
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Carbonic Anhydrase IX-mimic IN Complex WITH U-NO2
To Be Published
9DC7
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BU of 9dc7 by Molmil
AAV5 at 80 Degree Celsius
Descriptor: Capsid protein
Authors:McKenna, R, Bennett, A, Gliwa, K.
Deposit date:2024-08-25
Release date:2025-01-15
Last modified:2025-04-16
Method:ELECTRON MICROSCOPY (3.29 Å)
Cite:Biophysical and structural insights into AAV genome ejection.
J.Virol., 99, 2025
8E8P
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BU of 8e8p by Molmil
GSTZ1A
Descriptor: Maleylacetoacetate isomerase
Authors:McKenna, R, Combs, J.E.
Deposit date:2022-08-25
Release date:2023-10-18
Method:X-RAY DIFFRACTION (2.281 Å)
Cite:Structure of human GSTZ1-1 and modifications by dichloroacetate
To Be Published
7RRE
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BU of 7rre by Molmil
Carbonic Anhydrase II in complex with Beta-Galactose-2C
Descriptor: 2-[1-(1,1,3-trioxo-2,3-dihydro-1H-1lambda~6~,2-benzothiazol-6-yl)-1H-1,2,3-triazol-4-yl]ethyl beta-L-gulopyranoside, Carbonic anhydrase 2, GLYCEROL, ...
Authors:McKenna, R, Combs, J.E.
Deposit date:2021-08-09
Release date:2022-08-24
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.44 Å)
Cite:Inhibition of Carbonic Anhydrase IX and Monocarboxylate Transporters 1 and 4 in breast cancer via novel inhibition with Beta-Galactose 2C
To Be Published
7SUW
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BU of 7suw by Molmil
Carbonic Anhydrase IX-mimic with 2-((3-Aminopropyl)(phenethyl)amino)-N-(furan-2-ylmethyl)-N-(4-sulfamoylphenethyl)acetamide
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Carbonic anhydrase 2, N-(2-{[(furan-2-yl)methyl][2-(4-sulfamoylphenyl)ethyl]amino}-2-oxoethyl)-N-(2-phenylethyl)-beta-alanine, ...
Authors:McKenna, R, Combs, J.E.
Deposit date:2021-11-18
Release date:2022-04-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.456 Å)
Cite:The three-tails approach as a new strategy to improve selectivity of action of sulphonamide inhibitors against tumour-associated carbonic anhydrase IX and XII.
J Enzyme Inhib Med Chem, 37, 2022
6UZU
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BU of 6uzu by Molmil
Carbonic Anhydrase IX-mimic In Complex WITH U-CH3
Descriptor: 4-{[(3,5-dimethylphenyl)carbamoyl]amino}benzene-1-sulfonamide, Carbonic anhydrase 2, DIMETHYL SULFOXIDE, ...
Authors:McKenna, R, Mboge, M.Y, Mahon, B.P.
Deposit date:2019-11-15
Release date:2020-10-21
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure activity study of carbonic anhydrase IX: Selective inhibition with ureido-substituted benzenesulfonamides.
Eur J Med Chem, 132, 2017
4FIK
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BU of 4fik by Molmil
Human carbonic anhydrase II H64A complexed with thioxolone hydrolysis products
Descriptor: 2,4-dihydroxybenzenesulfenic acid, 4,4'-disulfanediyldibenzene-1,3-diol, 4-MERCAPTOBENZENE-1,3-DIOL, ...
Authors:Sippel, K.H, Genis, C, Govindasamy, L, Agbandje-McKenna, M, Tripp, B.C, McKenna, R.
Deposit date:2012-06-08
Release date:2012-06-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Synchrotron Radiation Provides a Plausible Explanation for the Generation of a Free Radical Adduct of Thioxolone in Mutant Carbonic Anhydrase II.
J Phys Chem Lett, 1, 2010
4GBT
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BU of 4gbt by Molmil
Structural characterization of H-1 Parvovirus: comparison of infectious virions to replication defective particles
Descriptor: CHLORIDE ION, Capsid protein VP1, SODIUM ION
Authors:Halder, S, Nam, H.-J, Govindasamy, L, Vogel, M, Dinsart, C, Salome, N, McKenna, R, Agbandje-McKenna, M.
Deposit date:2012-07-27
Release date:2013-02-27
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural characterization of h-1 parvovirus: comparison of infectious virions to empty capsids.
J.Virol., 87, 2013
7MT0
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BU of 7mt0 by Molmil
Structure of the adeno-associated virus 9 capsid at pH 7.4
Descriptor: Capsid protein VP1
Authors:Penzes, J.J, Chipman, P, Bhattacharya, N, Zeher, A, Huang, R, McKenna, R, Agbandje-McKenna, M.
Deposit date:2021-05-12
Release date:2021-06-02
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (2.82 Å)
Cite:Adeno-associated Virus 9 Structural Rearrangements Induced by Endosomal Trafficking pH and Glycan Attachment.
J.Virol., 95, 2021
7MTZ
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BU of 7mtz by Molmil
Structure of the adeno-associated virus 9 capsid at pH pH 7.4 in complex with terminal galactose
Descriptor: Capsid protein VP1, beta-D-galactopyranose
Authors:Penzes, J.J, Chipman, P, Bhattacharya, N, Zeher, A, Huang, R, McKenna, R, Agbandje-McKenna, M.
Deposit date:2021-05-14
Release date:2021-06-09
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (2.43 Å)
Cite:Adeno-associated Virus 9 Structural Rearrangements Induced by Endosomal Trafficking pH and Glycan Attachment.
J.Virol., 95, 2021
7MUA
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BU of 7mua by Molmil
Structure of the adeno-associated virus 9 capsid at pH pH 5.5 in complex with terminal galactose
Descriptor: Capsid protein VP1, beta-D-galactopyranose
Authors:Penzes, J.J, Chipman, P, Bhattacharya, N, Zeher, A, Huang, R, McKenna, R, Agbandje-McKenna, M.
Deposit date:2021-05-14
Release date:2021-06-09
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (2.68 Å)
Cite:Adeno-associated Virus 9 Structural Rearrangements Induced by Endosomal Trafficking pH and Glycan Attachment.
J.Virol., 95, 2021
7MTG
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BU of 7mtg by Molmil
Structure of the adeno-associated virus 9 capsid at pH 6.0
Descriptor: Capsid protein VP1
Authors:Penzes, J.J, Chipman, P, Bhattacharya, N, Zeher, A, Huang, R, McKenna, R, Agbandje-McKenna, M.
Deposit date:2021-05-13
Release date:2021-07-21
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (2.67 Å)
Cite:Adeno-associated Virus 9 Structural Rearrangements Induced by Endosomal Trafficking pH and Glycan Attachment.
J.Virol., 95, 2021
7MTP
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BU of 7mtp by Molmil
Structure of the adeno-associated virus 9 capsid at pH 5.5
Descriptor: Capsid protein VP1
Authors:Penzes, J.J, Chipman, P, Bhattacharya, N, Zeher, A, Huang, R, McKenna, R, Agbandje-McKenna, M.
Deposit date:2021-05-13
Release date:2021-07-21
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (2.79 Å)
Cite:Adeno-associated Virus 9 Structural Rearrangements Induced by Endosomal Trafficking pH and Glycan Attachment.
J.Virol., 95, 2021
7MTW
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BU of 7mtw by Molmil
Structure of the adeno-associated virus 9 capsid at pH 4.0
Descriptor: Capsid protein VP1
Authors:Penzes, J.J, Chipman, P, Bhattacharya, N, Zeher, A, Huang, R, McKenna, R, Agbandje-McKenna, M.
Deposit date:2021-05-13
Release date:2021-07-21
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (2.99 Å)
Cite:Adeno-associated Virus 9 Structural Rearrangements Induced by Endosomal Trafficking pH and Glycan Attachment.
J.Virol., 95, 2021
3UX1
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BU of 3ux1 by Molmil
Structural Characterization of Adeno-Associated Virus Serotype 9
Descriptor: Capsid protein VP1
Authors:DiMattia, M.A, Nam, H.-J, Van Vliet, K, Mitchell, M, McCall, A, Bennett, A, Gurda, B, McKenna, R, Potter, M, Sakai, Y, Byrne, B.J, Muzyczka, N, Aslanidi, G, Zolotukhin, S, Olson, N, Sinkovitis, R, Baker, T.S, Agbandje-McKenna, M.
Deposit date:2011-12-03
Release date:2012-05-02
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural insight into the unique properties of adeno-associated virus serotype 9.
J.Virol., 86, 2012
3DCW
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BU of 3dcw by Molmil
Use of Carbonic Anhydrase II, IX Active-Site Mimic, for the Purpose of Screening Inhibitors for Possible Anti-Cancer Properties
Descriptor: 6-ethoxy-1,3-benzothiazole-2-sulfonamide, Carbonic anhydrase 2, ZINC ION
Authors:Genis, C, Sippel, K.H, Case, N, Govindasamy, L, Agbandje-Mckenna, M, Mckenna, R.
Deposit date:2008-06-04
Release date:2009-03-03
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Design of a carbonic anhydrase IX active-site mimic to screen inhibitors for possible anticancer properties
Biochemistry, 48, 2009
3DAZ
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BU of 3daz by Molmil
Use of Carbonic Anhydrase II, IX Active-Site Mimic, for the Purpose of Screening Inhibitors for Possible Anti-Cancer Properties
Descriptor: Carbonic anhydrase 2, N-(3-methyl-5-sulfamoyl-1,3,4-thiadiazol-2(3H)-ylidene)acetamide, ZINC ION
Authors:Genis, C, Sippel, K.H, Case, N, Govindasamy, L, Agbandje-Mckenna, M, Mckenna, R.
Deposit date:2008-05-30
Release date:2009-03-03
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Design of a carbonic anhydrase IX active-site mimic to screen inhibitors for possible anticancer properties
Biochemistry, 48, 2009
3DCC
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BU of 3dcc by Molmil
Use of Carbonic Anhydrase II, IX Active-Site Mimic, for the Purpose of Screening Inhibitors for Possible Anti-Cancer Properties
Descriptor: 5-(2-chlorophenyl)-1,3,4-thiadiazole-2-sulfonamide, Carbonic anhydrase 2, ZINC ION
Authors:Genis, C, Sippel, K.H, Case, N, Govindasamy, L, Agbandje-Mckenna, M, Mckenna, R.
Deposit date:2008-06-03
Release date:2009-03-03
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Design of a carbonic anhydrase IX active-site mimic to screen inhibitors for possible anticancer properties
Biochemistry, 48, 2009
3DBU
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BU of 3dbu by Molmil
Use of Carbonic Anhydrase II, IX Active-Site Mimic, for the Purpose of Screening Inhibitors for Possible Anti-Cancer Properties
Descriptor: 5-[(phenylsulfonyl)amino]-1,3,4-thiadiazole-2-sulfonamide, Carbonic anhydrase 2, ZINC ION
Authors:Genis, C, Sippel, K.H, Case, N, Govindasamy, L, Agbandje-Mckenna, M, Mckenna, R.
Deposit date:2008-06-02
Release date:2009-03-03
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Design of a carbonic anhydrase IX active-site mimic to screen inhibitors for possible anticancer properties
Biochemistry, 48, 2009
3DD0
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BU of 3dd0 by Molmil
Use of Carbonic Anhydrase II, IX Active-Site Mimic, for the Purpose of Screening Inhibitors for Possible Anti-Cancer Properties
Descriptor: 6-ethoxy-1,3-benzothiazole-2-sulfonamide, Carbonic anhydrase 2, ZINC ION
Authors:Genis, C, Sippel, K.H, Case, N, Govindasamy, L, Agbandje-Mckenna, M, Mckenna, R.
Deposit date:2008-06-04
Release date:2009-03-03
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Design of a carbonic anhydrase IX active-site mimic to screen inhibitors for possible anticancer properties
Biochemistry, 48, 2009

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