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PDB: 138 results

1W3P
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NimA from D. radiodurans with a His71-Pyruvate residue
Descriptor: ACETATE ION, NIMA-RELATED PROTEIN, PYRUVIC ACID
Authors:Leiros, H.-K.S, Kozielski-Stuhrmann, S, Kapp, U, Terradot, L, Leonard, G.A, McSweeney, S.M.
Deposit date:2004-07-17
Release date:2004-10-18
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Basis of 5-Nitroimidazole Antibiotic Resistance: The Crystal Structure of Nima from Deinococcus Radiodurans
J.Biol.Chem., 279, 2004
1W3R
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NimA from D. radiodurans with Metronidazole and Pyruvate
Descriptor: ACETATE ION, Metronidazole, NIMA-RELATED PROTEIN, ...
Authors:Leiros, H.-K.S, Kozielski-Stuhrmann, S, Kapp, U, Terradot, L, Leonard, G.A, McSweeney, S.M.
Deposit date:2004-07-17
Release date:2004-10-18
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Basis of 5-Nitroimidazole Antibiotic Resistance: The Crystal Structure of Nima from Deinococcus Radiodurans
J.Biol.Chem., 279, 2004
1W3Q
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NimA from D. radiodurans with covalenly bound lactate
Descriptor: ACETATE ION, LACTIC ACID, NIMA-RELATED PROTEIN
Authors:Leiros, H.-K.S, Kozielski-Stuhrmann, S, Kapp, U, Terradot, L, Leonard, G.A, Mcsweeney, S.M.
Deposit date:2004-07-17
Release date:2004-10-18
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Structural Basis of 5-Nitroimidazole Antibiotic Resistance: The Crystal Structure of Nima from Deinococcus Radiodurans
J.Biol.Chem., 279, 2004
1W3O
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BU of 1w3o by Molmil
Crystal structure of NimA from D. radiodurans
Descriptor: ACETATE ION, NIMA-RELATED PROTEIN, PYRUVIC ACID
Authors:Leiros, H.-K.S, Kozielski-Stuhrmann, S, Kapp, U, Terradot, L, Leonard, G.A, McSweeney, S.M.
Deposit date:2004-07-17
Release date:2004-10-18
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural Basis of 5-Nitroimidazole Antibiotic Resistance: The Crystal Structure of Nima from Deinococcus Radiodurans
J.Biol.Chem., 279, 2004
4UOB
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Crystal structure of Deinococcus radiodurans Endonuclease III-3
Descriptor: ACETATE ION, COBALT (II) ION, ENDONUCLEASE III-3, ...
Authors:Sarre, A, Okvist, M, Klar, T, Hall, D, Smalas, A.O, McSweeney, S, Timmins, J, Moe, E.
Deposit date:2014-06-02
Release date:2015-06-10
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.31 Å)
Cite:Structural and Functional Characterization of Two Unusual Endonuclease III Enzymes from Deinococcus Radiodurans.
J.Struct.Biol., 191, 2015
7SEV
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BU of 7sev by Molmil
Crystal structure of E coli contaminant protein YadF co-purified with a plant protein
Descriptor: Carbonic anhydrase 2, POTASSIUM ION, ZINC ION
Authors:Chai, L, Zhu, P, Chai, J, Pang, C, Andi, B, McsWeeney, S, Shanklin, J, Liu, Q.
Deposit date:2021-10-01
Release date:2021-11-03
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:AlphaFold Protein Structure Database for Sequence-Independent Molecular Replacement
Crystals, 11, 2021
4UNF
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BU of 4unf by Molmil
Crystal structure of Deinococcus radiodurans Endonuclease III-1
Descriptor: ACETATE ION, ENDONUCLEASE III-1, IRON/SULFUR CLUSTER, ...
Authors:Sarre, A, Okvist, M, Klar, T, Hall, D, Smalas, A.O, McSweeney, S, Timmins, J, Moe, E.
Deposit date:2014-05-28
Release date:2015-06-10
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural and Functional Characterization of Two Unusual Endonuclease III Enzymes from Deinococcus Radiodurans.
J.Struct.Biol., 191, 2015
7SEU
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BU of 7seu by Molmil
Crystal structure of E coli contaminant protein YncE co-purified with a plant protein
Descriptor: PQQ-dependent catabolism-associated beta-propeller protein
Authors:Chai, L, Zhu, P, Chai, J, Pang, C, Andi, B, McsWeeney, S, Shanklin, J, Liu, Q.
Deposit date:2021-10-01
Release date:2022-04-20
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:AlphaFold Protein Structure Database for Sequence-Independent Molecular Replacement
Crystals, 11, 2021
6PBR
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BU of 6pbr by Molmil
Catalytic domain of E.coli dihydrolipoamide succinyltransferase in I4 space group
Descriptor: Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, SODIUM ION
Authors:Andi, B, Soares, A.S, Shi, W, Fuchs, M.R, McSweeney, S, Liu, Q.
Deposit date:2019-06-14
Release date:2019-06-26
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of the dihydrolipoamide succinyltransferase catalytic domain from Escherichia coli in a novel crystal form: a tale of a common protein crystallization contaminant.
Acta Crystallogr.,Sect.F, 75, 2019
7TDO
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BU of 7tdo by Molmil
Cryo-EM structure of transmembrane AAA+ protease FtsH in the ADP state
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent zinc metalloprotease FtsH
Authors:Liu, W, Schoonen, M, Wang, T, McSweeney, S, Liu, Q.
Deposit date:2022-01-02
Release date:2022-04-06
Last modified:2024-02-28
Method:ELECTRON MICROSCOPY (3.15 Å)
Cite:Cryo-EM structure of transmembrane AAA+ protease FtsH in the ADP state.
Commun Biol, 5, 2022
6C5Y
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BU of 6c5y by Molmil
Crystal structure of thaumatin from microcrystals
Descriptor: Thaumatin-1
Authors:Guo, G, Fuchs, M, Shi, W, Skinner, J, Berman, E, Ogata, C.M, Hendrickson, W.A, McSweeney, S, Liu, Q.
Deposit date:2018-01-17
Release date:2018-05-30
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Sample manipulation and data assembly for robust microcrystal synchrotron crystallography.
IUCrJ, 5, 2018
1HJ9
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BU of 1hj9 by Molmil
Atomic resolution structures of trypsin provide insight into structural radiation damage
Descriptor: ANILINE, BETA-TRYPSIN, CALCIUM ION, ...
Authors:Leiros, H.-K.S, McSweeney, S.M, Smalas, A.O.
Deposit date:2001-01-10
Release date:2002-01-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (0.95 Å)
Cite:Atomic Resolution Structure of Trypsin Provide Insight Into Structural Radiation Damage
Acta Crystallogr.,Sect.D, 57, 2001
1HJ8
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BU of 1hj8 by Molmil
1.00 AA Trypsin from Atlantic Salmon
Descriptor: BENZAMIDINE, CALCIUM ION, SULFATE ION, ...
Authors:Leiros, H.-K.S, Mcsweeney, S.M, Smalas, A.O.
Deposit date:2001-01-09
Release date:2002-01-04
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1 Å)
Cite:Atomic Resolution Structure of Trypsin Provide Insight Into Structural Radiation Damage
Acta Crystallogr.,Sect.D, 57, 2001
4JCV
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BU of 4jcv by Molmil
Crystal structure of the RecOR complex in an open conformation
Descriptor: DNA repair protein RecO, Recombination protein RecR, ZINC ION
Authors:Radzimanowski, J, McSweeney, S, Timmins, J.
Deposit date:2013-02-22
Release date:2013-08-07
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.34 Å)
Cite:An 'open' structure of the RecOR complex supports ssDNA binding within the core of the complex.
Nucleic Acids Res., 41, 2013
6MSX
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BU of 6msx by Molmil
Iron containing ferritin at 1.43A
Descriptor: 1,2-ETHANEDIOL, CADMIUM ION, Ferritin light chain, ...
Authors:Blackburn, A, Partowmah, S.H, Brennan, H.M, Mestizo, K.E, Stivala, C.D, Petreczky, J, Perez, A, Horn, A, McSweeney, S.
Deposit date:2018-10-18
Release date:2018-12-19
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:A simple technique to improve microcrystals using gel exclusion of nucleation inducing elements
To Be Published
6MX9
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BU of 6mx9 by Molmil
Lysozyme bound to 3-Aminophenol
Descriptor: 1,2-ETHANEDIOL, 3-aminophenol, BENZAMIDINE, ...
Authors:Blackburn, A, Partowmah, S.H, Brennan, H.M, Mestizo, K.E, Stivala, C.D, Petreczky, J, Perez, A, Horn, A, McSweeney, S.
Deposit date:2018-10-30
Release date:2018-12-26
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:A simple technique to improve microcrystals using gel exclusion of nucleation inducing elements
To Be Published
6W8S
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BU of 6w8s by Molmil
Crystal structure of metacaspase 4 from Arabidopsis
Descriptor: Metacaspase-4, SULFATE ION
Authors:Zhu, P, Yu, X.H, Wang, C, Zhang, Q, Liu, W, McSweeney, S, Shanklin, J, Lam, E, Liu, Q.
Deposit date:2020-03-21
Release date:2020-05-20
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.484 Å)
Cite:Structural basis for Ca2+-dependent activation of a plant metacaspase.
Nat Commun, 11, 2020
6W8T
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BU of 6w8t by Molmil
Crystal structure of metacaspase 4 from Arabidopsis (microcrystals treated with calcium)
Descriptor: Metacaspase-4, SULFATE ION
Authors:Zhu, P, Yu, X.H, Wang, C, Zhang, Q, Liu, W, McSweeney, S, Shanklin, J, Lam, E, Liu, Q.
Deposit date:2020-03-21
Release date:2020-05-20
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural basis for Ca2+-dependent activation of a plant metacaspase.
Nat Commun, 11, 2020
6W8R
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BU of 6w8r by Molmil
Crystal structure of metacaspase 4 C139A from Arabidopsis
Descriptor: Metacaspase-4, SULFATE ION
Authors:Zhu, P, Yu, X.H, Wang, C, Zhang, Q, Liu, W, McSweeney, S, Shanklin, J, Lam, E, Liu, Q.
Deposit date:2020-03-21
Release date:2020-05-20
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.801 Å)
Cite:Structural basis for Ca2+-dependent activation of a plant metacaspase.
Nat Commun, 11, 2020
6O8A
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BU of 6o8a by Molmil
Thaumatin native-SAD structure determined at 5 keV from microcrystals
Descriptor: L(+)-TARTARIC ACID, Thaumatin-1
Authors:Guo, G, Zhu, P, Fuchs, M.R, Shi, W, Andi, B, Gao, Y, Hendrickson, W.A, McSweeney, S, Liu, Q.
Deposit date:2019-03-09
Release date:2019-05-08
Last modified:2019-12-18
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Synchrotron microcrystal native-SAD phasing at a low energy.
Iucrj, 6, 2019
6TGT
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BU of 6tgt by Molmil
The Calcium soaked crystal structure of the DPS2 from DEINOCOCCUS RADIODURANS to 2.16A resolution (Soaked in CaCl2 [5mM] for 20 min).
Descriptor: CALCIUM ION, DNA protection during starvation protein 2, FE (III) ION
Authors:Cuypers, M.G, Romao, C.V, Mitchell, E.P, McSweeney, S.
Deposit date:2019-11-18
Release date:2020-12-02
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.155 Å)
Cite:The Calcium soaked crystal structure of the DPS2 from DEINOCOCCUS RADIODURANS to 2.16A resolution (Soaked in CaCl2 [5mM] for 20 min).
To Be Published
6TB5
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BU of 6tb5 by Molmil
The crystal structure of the DPS2 from DEINOCOCCUS RADIODURANS to 1.83A resolution (sequentially soaked in CaCl2 [5mM] for 20 min, then in Ammonium iron(II) sulfate [10mM] for 2h).
Descriptor: CALCIUM ION, DNA protection during starvation protein 2, FE (III) ION
Authors:Cuypers, M.G, McSweeney, S, Romao, C.V, Mitchell, E.P.
Deposit date:2019-10-31
Release date:2020-11-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:The crystal structure of the DPS2 from DEINOCOCCUS RADIODURANS to 1.83A resolution (sequentially soaked in CaCl2 [5mM] for 20 min, then in Ammonium iron(II) sulfate [10mM] for 2h).
To Be Published
8F6T
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BU of 8f6t by Molmil
Cryo-EM structure of alkane 1-monooxygenase AlkB-AlkG complex from Fontimonas thermophila
Descriptor: Alkane 1-monooxygenase, DODECANE, FE (III) ION
Authors:Chai, J, Guo, G, McSweeney, S, Shanklin, J, Liu, Q.
Deposit date:2022-11-17
Release date:2023-04-05
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (2.76 Å)
Cite:Structural basis for enzymatic terminal C-H bond functionalization of alkanes.
Nat.Struct.Mol.Biol., 30, 2023
2JH3
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BU of 2jh3 by Molmil
The crystal structure of DR2241 from Deinococcus radiodurans at 1.9 A resolution reveals a multi-domain protein with structural similarity to chelatases but also with two additional novel domains
Descriptor: IRON/SULFUR CLUSTER, RIBOSOMAL PROTEIN S2-RELATED PROTEIN
Authors:Leiros, H.-K.S, Mcsweeney, S.M.
Deposit date:2007-02-20
Release date:2007-06-19
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The Crystal Structure of Dr2241 from Deinococcus Radiodurans at 1.9 A Resolution Reveals a Multi-Domain Protein with Structural Similarity to Chelatases But Also with Two Additional Novel Domains
J.Struct.Biol., 159, 2007
1HZZ
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BU of 1hzz by Molmil
THE ASYMMETRIC COMPLEX OF THE TWO NUCLEOTIDE-BINDING COMPONENTS (DI, DIII) OF PROTON-TRANSLOCATING TRANSHYDROGENASE
Descriptor: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, PROTON-TRANSLOCATING NICOTINAMIDE NUCLEOTIDE TRANSHYDROGENASE SUBUNIT PNTAA, ...
Authors:Cotton, N.P.J, White, S.A, Peake, S.J, McSweeney, S, Jackson, J.B.
Deposit date:2001-01-27
Release date:2001-08-29
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The crystal structure of an asymmetric complex of the two nucleotide binding components of proton-translocating transhydrogenase.
Structure, 9, 2001

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