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PDB: 90 results

8QJK
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BU of 8qjk by Molmil
Structure of the cytoplasmic domain of csx23 from Vibrio cholera in complex with cyclic tetra-adenylate (cA4)
Descriptor: ACETYL GROUP, Cyclic tetraadenosine monophosphate (cA4), SODIUM ION, ...
Authors:McMahon, S.A, McQuarrie, S, Gloster, T.M, Gruschow, S, White, M.F.
Deposit date:2023-09-13
Release date:2024-08-07
Last modified:2025-02-26
Method:X-RAY DIFFRACTION (1.761 Å)
Cite:CRISPR antiphage defence mediated by the cyclic nucleotide-binding membrane protein Csx23.
Nucleic Acids Res., 52, 2024
6SCE
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BU of 6sce by Molmil
Structure of a Type III CRISPR defence DNA nuclease activated by cyclic oligoadenylate
Descriptor: Uncharacterized protein, cyclic oligoadenylate
Authors:McMahon, S.A, Zhu, W, Graham, S, White, M.F, Gloster, T.M.
Deposit date:2019-07-24
Release date:2020-02-19
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Structure and mechanism of a Type III CRISPR defence DNA nuclease activated by cyclic oligoadenylate.
Nat Commun, 11, 2020
6SCF
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BU of 6scf by Molmil
A viral anti-CRISPR subverts type III CRISPR immunity by rapid degradation of cyclic oligoadenylate
Descriptor: Uncharacterized protein, cyclic oligoadenylate
Authors:McMahon, S.A, Athukoralage, J.S, Graham, S, White, M.F, Gloster, T.M.
Deposit date:2019-07-24
Release date:2019-10-30
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:An anti-CRISPR viral ring nuclease subverts type III CRISPR immunity.
Nature, 577, 2020
3FFE
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BU of 3ffe by Molmil
Structure of Achromobactin Synthetase Protein D, (AcsD)
Descriptor: AcsD
Authors:McMahon, S.A, Liu, H, Carter, L, Oke, M, Johnson, K.A, Schmelz, S, Challis, G.L, White, M.F, Naismith, J.H, Scottish Structural Proteomics Facility (SSPF)
Deposit date:2008-12-03
Release date:2009-02-03
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:AcsD catalyzes enantioselective citrate desymmetrization in siderophore biosynthesis
Nat.Chem.Biol., 5, 2009
1YU4
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BU of 1yu4 by Molmil
Major Tropism Determinant U1 Variant
Descriptor: MAGNESIUM ION, Major Tropism Determinant (Mtd-U1)
Authors:McMahon, S.A, Miller, J.L, Lawton, J.A, Ghosh, P.
Deposit date:2005-02-11
Release date:2005-09-20
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:The C-type lectin fold as an evolutionary solution for massive sequence variation
Nat.Struct.Mol.Biol., 12, 2005
1YU1
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BU of 1yu1 by Molmil
Major Tropism Determinant P3c Variant
Descriptor: MAGNESIUM ION, METHYL MERCURY ION, Major Tropism Determinant (Mtd-P3c)
Authors:McMahon, S.A, Miller, J.L, Lawton, J.A, Ghosh, P.
Deposit date:2005-02-11
Release date:2005-09-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:The C-type lectin fold as an evolutionary solution for massive sequence variation
Nat.Struct.Mol.Biol., 12, 2005
1YU2
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BU of 1yu2 by Molmil
Major Tropism Determinant M1 Variant
Descriptor: MAGNESIUM ION, Major Tropism Determinant (Mtd-M1)
Authors:McMahon, S.A, Miller, J.L, Lawton, J.A, Ghosh, P.
Deposit date:2005-02-11
Release date:2005-09-20
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:The C-type lectin fold as an evolutionary solution for massive sequence variation
Nat.Struct.Mol.Biol., 12, 2005
1YU0
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BU of 1yu0 by Molmil
Major Tropism Determinant P1 Variant
Descriptor: CALCIUM ION, Major Tropism Determinant (Mtd-P1)
Authors:McMahon, S.A, Miller, J.L, Lawton, J.A, Ghosh, P.
Deposit date:2005-02-11
Release date:2005-09-20
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:The C-type lectin fold as an evolutionary solution for massive sequence variation
Nat.Struct.Mol.Biol., 12, 2005
1YU3
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BU of 1yu3 by Molmil
Major Tropism Determinant I1 Variant
Descriptor: MAGNESIUM ION, Major Tropism Determinant (Mtd-I1)
Authors:McMahon, S.A, Miller, J.L, Lawton, J.A, Ghosh, P.
Deposit date:2005-02-11
Release date:2005-09-20
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.52 Å)
Cite:The C-type lectin fold as an evolutionary solution for massive sequence variation
Nat.Struct.Mol.Biol., 12, 2005
2WR8
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BU of 2wr8 by Molmil
Structure of Pyrococcus horikoshii SAM hydroxide adenosyltransferase in complex with SAH
Descriptor: PUTATIVE UNCHARACTERIZED PROTEIN PH0463, S-ADENOSYL-L-HOMOCYSTEINE
Authors:McMahon, S.A, Deng, H, O'Hagan, D, Johnson, K.A, Naismith, J.H.
Deposit date:2009-08-31
Release date:2009-09-22
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Mechanistic Insights Into Water Activation in Sam Hydroxide Adenosyltransferase (Duf-62).
Chembiochem, 10, 2009
4AVF
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BU of 4avf by Molmil
Crystal structure of Pseudomonas aeruginosa inosine 5'-monophosphate dehydrogenase
Descriptor: INOSINE-5'-MONOPHOSPHATE DEHYDROGENASE
Authors:McMahon, S.A, Moynie, L, Liu, H, Duthie, F, Naismith, J.H.
Deposit date:2012-05-25
Release date:2013-01-09
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:The Aeropath Project Targeting Pseudomonas Aeruginosa: Crystallographic Studies for Assessment of Potential Targets in Early-Stage Drug Discovery
Acta Crystallogr.,Sect.F, 69, 2013
4BQQ
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BU of 4bqq by Molmil
Protein crystal structure of the N-terminal and recombinase domains of the Streptomyces temperate phage serine recombinase, fC31 integrase.
Descriptor: INTEGRASE
Authors:McMahon, S.A, McEwan, A.R, Smith, M.C.M, Naismith, J.H.
Deposit date:2013-05-31
Release date:2013-06-12
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Protein Crystal Structure of the N-Terminal and Recombinase Domains of the Streptomyces Temperate Phage Serine Recombinase, Fc31 Integrase.
To be Published
4CQJ
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BU of 4cqj by Molmil
Fluorinase substrate flexibility enables last step aqueous and ambient 18F fluorination of a RGD peptide for positron emission tomography
Descriptor: 5'-FLUORO-5'-DEOXY-ADENOSINE SYNTHASE, 5'-deoxy-2-ethynyl-5'-fluoroadenosine
Authors:McMahon, S.A, Thompson, S, O'Hagan, D, Naismith, J.H.
Deposit date:2014-02-17
Release date:2014-05-28
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.44 Å)
Cite:Structure of a Bacterial Fluorinating Enzyme with
To be Published
4CCV
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BU of 4ccv by Molmil
Crystal structure of histidine-rich glycoprotein N2 domain reveals redox activity at an interdomain disulfide bridge: Implications for the regulation of angiogenesis
Descriptor: GLUTATHIONE, GLYCEROL, HISTIDINE-RICH GLYCOPROTEIN, ...
Authors:McMahon, S.A, Kassaar, O, Stewart, A.J, Naismith, J.H.
Deposit date:2013-10-29
Release date:2014-02-19
Last modified:2025-04-09
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Crystal Structure of Histidine-Rich Glycoprotein N2 Domain Reveals Redox Activity at an Interdomain Disulfide Bridge: Implications for Angiogenic Regulation.
Blood, 123, 2014
4AVR
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BU of 4avr by Molmil
Crystal structure of the hypothetical protein Pa4485 from Pseudomonas aeruginosa
Descriptor: PA4485
Authors:McMahon, S.A, Moynie, L, Liu, H, Duthie, F, Alphey, M.S, Naismith, J.H.
Deposit date:2012-05-29
Release date:2013-01-09
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.08 Å)
Cite:The Aeropath Project Targeting Pseudomonas Aeruginosa: Crystallographic Studies for Assessment of Potential Targets in Early-Stage Drug Discovery.
Acta Crystallogr.,Sect.F, 69, 2013
1I8T
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BU of 1i8t by Molmil
STRUCTURE OF UDP-GALACTOPYRANOSE MUTASE FROM E.COLI
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, UDP-GALACTOPYRANOSE MUTASE
Authors:Sanders, D.A.R, Staines, A.G, McMahon, S.A, McNeil, M.R, Whitfield, C, Naismith, J.H.
Deposit date:2001-03-16
Release date:2001-10-03
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:UDP-galactopyranose mutase has a novel structure and mechanism.
Nat.Struct.Biol., 8, 2001
5FIU
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BU of 5fiu by Molmil
Binding and structural studies of a 5,5-difluoromethyl adenosine nucleoside with the fluorinase enzyme
Descriptor: 5'-FLUORO-5'-DEOXY-ADENOSINE SYNTHASE, 5,5-DIFLUOROMETHYL ADENOSINE, L(+)-TARTARIC ACID
Authors:Thompson, S, McMahon, S.A, Naismith, J.H, O'Hagan, D.
Deposit date:2015-10-02
Release date:2015-12-23
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Exploration of a Potential Difluoromethyl-Nucleoside Substrate with the Fluorinase Enzyme.
Bioorg.Chem., 64, 2015
3TEK
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BU of 3tek by Molmil
ThermoDBP: a non-canonical single-stranded DNA binding protein with a novel structure and mechanism
Descriptor: ThermoDBP-single stranded DNA binding protein
Authors:White, M.F, Paytubi, S, Liu, H, Graham, S, McMahon, S.A, Naismith, J.H.
Deposit date:2011-08-15
Release date:2011-11-23
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2 Å)
Cite:Displacement of the canonical single-stranded DNA-binding protein in the Thermoproteales.
Proc.Natl.Acad.Sci.USA, 109, 2012
6FI2
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BU of 6fi2 by Molmil
VexL: A periplasmic depolymerase provides new insight into ABC transporter-dependent secretion of bacterial capsular polysaccharides
Descriptor: 2-acetamido-2-deoxy-alpha-D-galactopyranuronic acid-(1-4)-3-O-acetyl-2-acetamido-2-deoxy-alpha-D-galactopyranuronic acid-(1-4)-3-O-acetyl-2-acetamido-2-deoxy-alpha-D-galactopyranuronic acid, MALONATE ION, VexL
Authors:Naismith, J.H, McMahon, S.A, Le Bas, A, Liston, S.D, Whitfield, C.
Deposit date:2018-01-16
Release date:2018-05-02
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:Periplasmic depolymerase provides insight into ABC transporter-dependent secretion of bacterial capsular polysaccharides.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
7BDV
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BU of 7bdv by Molmil
Structure of Can2 from Sulfobacillus thermosulfidooxidans in complex with cyclic tetra-adenylate (cA4)
Descriptor: Can2, Cyclic tetraadenosine monophosphate (cA4)
Authors:McQuarrie, S, McMahon, S.A, Gloster, T.M, White, M.F, Graham, S, Zhu, W, Gruschow, S.
Deposit date:2020-12-22
Release date:2021-03-03
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:The CRISPR ancillary effector Can2 is a dual-specificity nuclease potentiating type III CRISPR defence.
Nucleic Acids Res., 49, 2021
2JGT
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BU of 2jgt by Molmil
Low resolution structure of SPT
Descriptor: SERINE PALMITOYLTRANSFERASE
Authors:Yard, B.A, Carter, L.G, Johnson, K.A, Overton, I.M, Mcmahon, S.A, Dorward, M, Liu, H, Puech, D, Oke, M, Barton, G.J, Naismith, J.H, Campopiano, D.J.
Deposit date:2007-02-14
Release date:2007-05-01
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:The Structure of Serine Palmitoyltransferase; Gateway to Sphingolipid Biosynthesis.
J.Mol.Biol., 370, 2007
2JG2
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BU of 2jg2 by Molmil
HIGH RESOLUTION STRUCTURE OF SPT WITH PLP INTERNAL ALDIMINE
Descriptor: MAGNESIUM ION, PYRIDOXAL-5'-PHOSPHATE, SERINE PALMITOYLTRANSFERASE
Authors:Yard, B.A, Carter, L.G, Johnson, K.A, Overton, I.M, Mcmahon, S.A, Dorward, M, Liu, H, Puech, D, Oke, M, Barton, G.J, Naismith, J.H, Campopiano, D.J.
Deposit date:2007-02-07
Release date:2007-05-01
Last modified:2025-04-09
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:The Structure of Serine Palmitoyltransferase; Gateway to Sphingolipid Biosynthesis.
J.Mol.Biol., 370, 2007
6ZZS
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BU of 6zzs by Molmil
Crystal structure of (R)-3-hydroxybutyrate dehydrogenase from Acinetobacter baumannii complexed with NAD+ and 3-oxovalerate
Descriptor: 3-hydroxybutyrate dehydrogenase, 3-oxidanylidenepentanoic acid, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Machado, T.F.G, da Silva, R.G, Gloster, T.M, McMahon, S.A, Oehler, V.
Deposit date:2020-08-05
Release date:2020-10-07
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Dissecting the Mechanism of ( R )-3-Hydroxybutyrate Dehydrogenase by Kinetic Isotope Effects, Protein Crystallography, and Computational Chemistry.
Acs Catalysis, 10, 2020
6ZZP
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BU of 6zzp by Molmil
Crystal structure of (R)-3-hydroxybutyrate dehydrogenase from Psychrobacter arcticus complexed with NAD+ and 3-oxovalerate
Descriptor: 3-oxidanylidenepentanoic acid, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Putative beta-hydroxybutyrate dehydrogenase
Authors:Machado, T.F.G, da Silva, R.G, Gloster, T.M, McMahon, S.A, Oehler, V.
Deposit date:2020-08-04
Release date:2020-10-07
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Dissecting the Mechanism of ( R )-3-Hydroxybutyrate Dehydrogenase by Kinetic Isotope Effects, Protein Crystallography, and Computational Chemistry.
Acs Catalysis, 10, 2020
6ZZQ
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BU of 6zzq by Molmil
Crystal structure of (R)-3-hydroxybutyrate dehydrogenase from Acinetobacter baumannii complexed with NAD+ and acetoacetate
Descriptor: 3-hydroxybutyrate dehydrogenase, ACETOACETIC ACID, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Machado, T.F.G, da Silva, R.G, Gloster, T.M, McMahon, S.A, Oehler, V.
Deposit date:2020-08-05
Release date:2020-10-07
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Dissecting the Mechanism of ( R )-3-Hydroxybutyrate Dehydrogenase by Kinetic Isotope Effects, Protein Crystallography, and Computational Chemistry.
Acs Catalysis, 10, 2020

 

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