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PDB: 1323 results

7MS7
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BU of 7ms7 by Molmil
Structure of USP5 zinc-finger ubiquitin binding domain co-crystallized with (5-((4-(4-chlorophenyl)piperidin-1-yl)sulfonyl)picolinoyl)glycine
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, N-{5-[4-(4-chlorophenyl)piperidine-1-sulfonyl]pyridine-2-carbonyl}glycine, ...
Authors:Mann, M.K, Zepeda-Velazquez, C.A, Alvarez, H.G, Dong, A, Kiyota, T, Aman, A, Arrowsmith, C.H, Al-Awar, R, Harding, R.J, Schapira, M.
Deposit date:2021-05-10
Release date:2021-06-09
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structure-Activity Relationship of USP5 Inhibitors.
J.Med.Chem., 64, 2021
7MS5
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BU of 7ms5 by Molmil
Structure of USP5 zinc-finger ubiquitin binding domain co-crystallized with 4-(4-(4-(3,4-difluoro-phenyl)-piperidin-1-ylsulfonyl)-phenyl)-4-oxo-butanoic acid
Descriptor: 1,2-ETHANEDIOL, 4-{4-[4-(3,4-difluorophenyl)piperidine-1-sulfonyl]phenyl}-4-oxobutanoic acid, CALCIUM ION, ...
Authors:Mann, M.K, Zepeda-Velazquez, C.A, Alvarez, H.G, Dong, A, Kiyota, T, Aman, A, Arrowsmith, C.H, Al-Awar, R, Harding, R.J, Schapira, M, Structural Genomics Consortium (SGC)
Deposit date:2021-05-10
Release date:2021-06-09
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Structure-Activity Relationship of USP5 Inhibitors.
J.Med.Chem., 64, 2021
7MS6
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BU of 7ms6 by Molmil
Structure of USP5 zinc-finger ubiquitin binding domain co-crystallized with (2-fluoro-4-((4-phenylpiperidin-1-yl)sulfonyl)benzoyl)glycine
Descriptor: 1,2-ETHANEDIOL, N-[2-fluoro-4-(4-phenylpiperidine-1-sulfonyl)benzoyl]glycine, SULFATE ION, ...
Authors:Mann, M.K, Zepeda-Velazquez, C.A, Alvarez, H.G, Dong, A, Kiyota, T, Aman, A, Arrowsmith, C.H, Al-Awar, R, Harding, R.J, Schapira, M.
Deposit date:2021-05-10
Release date:2021-06-09
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structure-Activity Relationship of USP5 Inhibitors.
J.Med.Chem., 64, 2021
1WDX
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BU of 1wdx by Molmil
Yeast BBC1 SH3 domain, triclinic crystal form
Descriptor: Myosin tail region-interacting protein MTI1
Authors:Wilmanns, M, Consani Textor, L, Kursula, P, Kursula, I, Lehmann, F, Song, Y.H.
Deposit date:2004-05-19
Release date:2005-05-31
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of Yeast BBC1 SH3 domain, triclinic crystal form
To be Published
3CRU
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BU of 3cru by Molmil
Structural characterization of an engineered allosteric protein
Descriptor: GLUTATHIONE, Glutathione S-transferase class-mu 26 kDa isozyme
Authors:Sagermann, M, Chapleau, R, DeLorimier, E, Lei, M.
Deposit date:2008-04-07
Release date:2009-02-24
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Using affinity chromatography to engineer and characterize pH-dependent protein switches.
Protein Sci., 18, 2009
3CRT
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BU of 3crt by Molmil
Structural characterization of an engineered allosteric protein
Descriptor: GLUTATHIONE, Glutathione S-transferase class-mu 26 kDa isozyme
Authors:Sagermann, M, Chapleau, R, DeLorimier, E, Lei, M.
Deposit date:2008-04-07
Release date:2009-02-24
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Using affinity chromatography to engineer and characterize pH-dependent protein switches.
Protein Sci., 18, 2009
5LOS
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BU of 5los by Molmil
Piriformospora indica PIIN_05872
Descriptor: PIIN_05872, SULFATE ION, ZINC ION
Authors:Hartmann, M.D, Albrecht, R, Martin, J, Lupas, A.N.
Deposit date:2016-08-09
Release date:2018-05-02
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:A secreted fungal histidine- and alanine-rich protein regulates metal ion homeostasis and oxidative stress.
New Phytol., 227, 2020
4UZR
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BU of 4uzr by Molmil
Crystal Structure of Pyrococcus horikoshii Ph1500
Descriptor: PUTATIVE UNCHARACTERIZED PROTEIN PH1500
Authors:Hartmann, M.D, Ammelburg, M, Djuranovic, S, Lupas, A.N.
Deposit date:2014-09-08
Release date:2015-10-07
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.652 Å)
Cite:Crystal Structure of Pyrococcus Horikoshii Ph1500
To be Published
4V31
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BU of 4v31 by Molmil
Cereblon isoform 4 from Magnetospirillum gryphiswaldense in complex with Deoxyuridine
Descriptor: 2'-DEOXYURIDINE, CEREBLON ISOFORM 4, CITRATE ANION, ...
Authors:Hartmann, M.D, Lupas, A.N, Hernandez Alvarez, B.
Deposit date:2014-10-15
Release date:2014-12-17
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Thalidomide Mimics Uridine Binding to an Aromatic Cage in Cereblon.
J.Struct.Biol., 188, 2014
4V32
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BU of 4v32 by Molmil
Cereblon isoform 4 from Magnetospirillum gryphiswaldense in complex with Thalidomide, Y101F mutant
Descriptor: CEREBLON ISOFORM 4, S-Thalidomide, ZINC ION
Authors:Hartmann, M.D, Lupas, A.N, Hernandez Alvarez, B.
Deposit date:2014-10-15
Release date:2014-12-17
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Thalidomide Mimics Uridine Binding to an Aromatic Cage in Cereblon.
J.Struct.Biol., 188, 2014
4V2Y
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BU of 4v2y by Molmil
Cereblon isoform 4 from Magnetospirillum gryphiswaldense in complex with Thalidomide
Descriptor: CEREBLON ISOFORM 4, S-Thalidomide, ZINC ION
Authors:Hartmann, M.D, Lupas, A.N, Hernandez Alvarez, B.
Deposit date:2014-10-15
Release date:2014-12-17
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Thalidomide Mimics Uridine Binding to an Aromatic Cage in Cereblon.
J.Struct.Biol., 188, 2014
4V2Z
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BU of 4v2z by Molmil
Cereblon isoform 4 from Magnetospirillum gryphiswaldense in complex with Pomalidomide
Descriptor: CEREBLON ISOFORM 4, S-Pomalidomide, ZINC ION
Authors:Hartmann, M.D, Lupas, A.N, Hernandez Alvarez, B.
Deposit date:2014-10-15
Release date:2014-12-17
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Thalidomide Mimics Uridine Binding to an Aromatic Cage in Cereblon.
J.Struct.Biol., 188, 2014
4V30
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BU of 4v30 by Molmil
Cereblon isoform 4 from Magnetospirillum gryphiswaldense in complex with Lenalidomide
Descriptor: CEREBLON ISOFORM 4, S-Lenalidomide, ZINC ION
Authors:Hartmann, M.D, Lupas, A.N, Hernandez Alvarez, B.
Deposit date:2014-10-15
Release date:2014-12-17
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Thalidomide Mimics Uridine Binding to an Aromatic Cage in Cereblon.
J.Struct.Biol., 188, 2014
2RG2
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BU of 2rg2 by Molmil
Crystal structure of variant R18L of conjugated bile acid hydrolase from Clostridium perfringens
Descriptor: 1,2-ETHANEDIOL, Choloylglycine hydrolase, GLYCEROL, ...
Authors:Rossmann, M, Saenger, W.
Deposit date:2007-10-02
Release date:2009-02-17
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural analysis of variants of conjugated bile acid hydrolase from Clostridium perfringens
To be Published
2RF8
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BU of 2rf8 by Molmil
Crystal Structure of the mutant C2A conjugated bile acid hydrolase from Clostridium perfringens
Descriptor: Choloylglycine hydrolase, GLYCEROL
Authors:Rossmann, M, Saenger, W.
Deposit date:2007-09-28
Release date:2008-10-07
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural basis for the catalytic activity and processing of the conjugated bile salt hydrolase from Clostridium perfringens
To be Published
2RLC
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BU of 2rlc by Molmil
Crystal Structure of the Conjugated Bile Acid Hydrolase from Clostridium perfringens in Complex with Reaction Products Glycine and Cholate
Descriptor: CHOLIC ACID, Choloylglycine hydrolase, GLYCINE, ...
Authors:Rossmann, M, Saenger, W.
Deposit date:2007-10-18
Release date:2009-02-17
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structures of choloyl glycine hydrolase from Clostridium perfringens
To be Published
6DXT
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BU of 6dxt by Molmil
Structure of USP5 zinc-finger ubiquitin binding domain co-crystallized with 3-(5-phenyl-1,3,4-oxadiazol-2-yl)propanoate
Descriptor: 1,2-ETHANEDIOL, 3-(5-phenyl-1,3,4-oxadiazol-2-yl)propanoic acid, UNKNOWN ATOM OR ION, ...
Authors:Mann, M.K, Harding, R.J, Ravichandran, M, Ferreira de Freitas, R, Franzoni, I, Bountra, C, Edwards, A.M, Arrowsmith, C.M, Schapira, M, Structural Genomics Consortium (SGC)
Deposit date:2018-06-29
Release date:2018-08-08
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Discovery of Small Molecule Antagonists of the USP5 Zinc Finger Ubiquitin-Binding Domain.
J.Med.Chem., 62, 2019
1MEC
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BU of 1mec by Molmil
CONFORMATIONAL VARIABILITY OF A PICORNAVIRUS CAPSID: PH-DEPENDENT STRUCTURAL CHANGES OF MENGO VIRUS RELATED TO ITS HOST RECEPTOR ATTACHMENT SITE AND DISASSEMBLY
Descriptor: MENGO VIRUS COAT PROTEIN (SUBUNIT VP1), MENGO VIRUS COAT PROTEIN (SUBUNIT VP2), PHOSPHATE ION
Authors:Rossmann, M.G.
Deposit date:1992-01-17
Release date:1994-01-31
Last modified:2023-04-19
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Conformational variability of a picornavirus capsid: pH-dependent structural changes of Mengo virus related to its host receptor attachment site and disassembly.
Virology, 175, 1990
1W2W
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BU of 1w2w by Molmil
Crystal structure of yeast Ypr118w, a methylthioribose-1-phosphate isomerase related to regulatory eIF2B subunits
Descriptor: 5-METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE, SULFATE ION
Authors:Bumann, M, Djafarzadeh, S, Oberholzer, A.E, Bigler, P, Altmann, M, Trachsel, H, Baumann, U.
Deposit date:2004-07-09
Release date:2004-07-16
Last modified:2019-05-08
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal Structure of Yeast Ypr118W, a Methylthioribose-1-Phosphate Isomerase Related to Regulatory Eif2B Subunits
J.Biol.Chem., 279, 2004
3IYW
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BU of 3iyw by Molmil
West Nile virus in complex with Fab fragments of MAb CR4354 (fitted coordinates of envelope proteins and Fab fragments of one icosahedral ASU)
Descriptor: 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-alpha-D-glucopyranose, CR4354 Fab fragment X1, heavy chain H, ...
Authors:Rossmann, M.G, Kaufmann, B.
Deposit date:2010-06-18
Release date:2010-11-24
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (13.7 Å)
Cite:Neutralization of West Nile virus by cross-linking of its surface proteins with Fab fragments of the human monoclonal antibody CR4354.
Proc.Natl.Acad.Sci.USA, 107, 2010
1JEW
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BU of 1jew by Molmil
CRYO-EM STRUCTURE OF COXSACKIEVIRUS B3(M STRAIN) WITH ITS CELLULAR RECEPTOR, COXSACKIEVIRUS AND ADENOVIRUS RECEPTOR (CAR).
Descriptor: COXSACKIEVIRUS AND ADENOVIRUS RECEPTOR, COXSACKIEVIRUS CAPSID, COAT PROTEIN VP1, ...
Authors:Rossmann, M.G, He, Y.
Deposit date:2001-06-19
Release date:2001-10-03
Last modified:2024-02-07
Method:ELECTRON MICROSCOPY (22 Å)
Cite:Interaction of coxsackievirus B3 with the full length coxsackievirus-adenovirus receptor.
Nat.Struct.Biol., 8, 2001
4SBV
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BU of 4sbv by Molmil
The REFINEMENT OF SOUTHERN BEAN MOSAIC VIRUS IN RECIPROCAL SPACE
Descriptor: CALCIUM ION, SOUTHERN BEAN MOSAIC VIRUS COAT PROTEIN
Authors:Rossmann, M.G.
Deposit date:1985-04-01
Release date:1985-07-17
Last modified:2023-06-28
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Refined structure of southern bean mosaic virus at 2.9 A resolution.
J.Mol.Biol., 197, 1987
2M37
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BU of 2m37 by Molmil
Structure of lasso peptide astexin-1
Descriptor: ASTEXIN-1
Authors:Zimmermann, M, Hegemann, J.D, Xie, X, Marahiel, M.A.
Deposit date:2013-01-14
Release date:2013-05-01
Method:SOLUTION NMR
Cite:The astexin-1 lasso peptides: biosynthesis, stability, and structural studies.
Chem.Biol., 20, 2013
2MLJ
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BU of 2mlj by Molmil
Structure of Lasso Peptide Caulonodin V
Descriptor: Caulonodin V
Authors:Zimmermann, M, Hegemann, J.D, Xie, X, Marahiel, M.A.
Deposit date:2014-02-28
Release date:2015-01-14
Method:SOLUTION NMR
Cite:Characterization of caulonodin lasso peptides revealed unprecedented N-terminal residues and a precursor motif essential for peptide maturation
CHEM SCI, 5, 2014
1XF7
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BU of 1xf7 by Molmil
High Resolution NMR Structure of the Wilms' Tumor Suppressor Protein (WT1) Finger 3
Descriptor: Wilms' Tumor Protein, ZINC ION
Authors:Lachenmann, M.J, Ladbury, J.E, Dong, J, Huang, K, Carey, P, Weiss, M.A.
Deposit date:2004-09-14
Release date:2004-12-14
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Why zinc fingers prefer zinc: ligand-field symmetry and the hidden thermodynamics of metal ion selectivity
Biochemistry, 43, 2004

222036

數據於2024-07-03公開中

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