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PDB: 1322 results

6RYU
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BU of 6ryu by Molmil
Nucleosome-CHD4 complex structure (two CHD4 copies)
Descriptor: Chromodomain-helicase-DNA-binding protein 4,CHD4,Chromodomain-helicase-DNA-binding protein 4, DNA (149-MER), Histone H2A type 1, ...
Authors:Farnung, L, Ochmann, M, Cramer, P.
Deposit date:2019-06-12
Release date:2020-07-15
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Nucleosome-CHD4 chromatin remodeller structure maps human disease mutations.
Elife, 9, 2020
4KVC
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BU of 4kvc by Molmil
2H2 Fab fragment of immature Dengue virus
Descriptor: Ig heavy chain V region MOPC 21, Igh protein, Ig kappa chain V-V region MOPC 21, ...
Authors:Wang, Z, Rossmann, M.G.
Deposit date:2013-05-22
Release date:2013-07-24
Last modified:2017-08-02
Method:X-RAY DIFFRACTION (2.306 Å)
Cite:Obstruction of Dengue Virus Maturation by Fab Fragments of the 2H2 Antibody.
J.Virol., 87, 2013
8RBX
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BU of 8rbx by Molmil
Structure of Integrator-PP2A bound to a paused RNA polymerase II-DSIF-NELF-nucleosome complex
Descriptor: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit RPB11-a, DNA-directed RNA polymerase II subunit RPB3, ...
Authors:Fianu, I, Ochmann, M, Walshe, J.L, Cramer, P.
Deposit date:2023-12-05
Release date:2024-02-07
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Structural basis of Integrator-dependent RNA polymerase II termination.
Nature, 629, 2024
3URO
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BU of 3uro by Molmil
Poliovirus receptor CD155 D1D2
Descriptor: Poliovirus receptor
Authors:Zhang, P, Mueller, S, Morais, M.C, Bator, C.M, Bowman, V.D, Hafenstein, S, Wimmer, E, Rossmann, M.G.
Deposit date:2011-11-22
Release date:2011-12-07
Method:X-RAY DIFFRACTION (3.5005 Å)
Cite:Crystal structure of CD155 and electron microscopic studies of its complexes with polioviruses.
Proc.Natl.Acad.Sci.USA, 105, 2008
6R5Z
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BU of 6r5z by Molmil
9-bladed beta-propeller formed by three 3-bladed fragments
Descriptor: 9-bladed beta-propeller formed by three 3-bladed fragments
Authors:Martin, J, Lupas, A.N, Hartmann, M.D.
Deposit date:2019-03-26
Release date:2019-11-13
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural diversity of oligomeric beta-propellers with different numbers of identical blades.
Elife, 8, 2019
1SHW
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BU of 1shw by Molmil
EphB2 / EphrinA5 Complex Structure
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Ephrin type-B receptor 2, Ephrin-A5, ...
Authors:Himanen, J.P, Chumley, M.J, Lackmann, M, Li, C, Barton, W.A, Jeffrey, P.D, Vearing, C, Geleick, D, Feldheim, D.A, Boyd, A.W.
Deposit date:2004-02-26
Release date:2004-05-18
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Repelling class discrimination: ephrin-A5 binds to and activates EphB2 receptor signaling
Nat.Neurosci., 7, 2004
4KAB
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BU of 4kab by Molmil
FOCAL ADHESION KINASE CATALYTIC DOMAIN IN COMPLEX WITH 3-Methyl-1,4-dihydro-pyrazolo[4,5-c]pyrazole
Descriptor: 3-methyl-1,5-dihydropyrazolo[4,3-c]pyrazole, Focal adhesion kinase 1
Authors:Musil, D, Graedler, U, Heinrich, T, Lehmann, M, Dresing, V.
Deposit date:2013-04-22
Release date:2013-09-11
Last modified:2013-10-09
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:Fragment-based discovery of focal adhesion kinase inhibitors.
Bioorg.Med.Chem.Lett., 23, 2013
4LHD
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BU of 4lhd by Molmil
Crystal structure of Synechocystis sp. PCC 6803 glycine decarboxylase (P-protein), holo form with pyridoxal-5'-phosphate and glycine, closed flexible loop
Descriptor: 1,2-ETHANEDIOL, BICARBONATE ION, GLYCINE, ...
Authors:Hasse, D, Andersson, E, Carlsson, G, Masloboy, A, Hagemann, M, Bauwe, H, Andersson, I.
Deposit date:2013-07-01
Release date:2013-10-16
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.7959 Å)
Cite:Structure of the Homodimeric Glycine Decarboxylase P-protein from Synechocystis sp. PCC 6803 Suggests a Mechanism for Redox Regulation.
J.Biol.Chem., 288, 2013
5C9M
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BU of 5c9m by Molmil
The structure of oxidized rat cytochrome c (T28A) at 1.362 angstroms resolution.
Descriptor: Cytochrome c, somatic, HEME C, ...
Authors:Edwards, B.F.P, Mahapatra, G, Vaishnav, A.A, Brunzelle, J.S, Huttemann, M.
Deposit date:2015-06-28
Release date:2016-09-21
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.362 Å)
Cite:The structure of oxidized rat cytochrome c (T28A) at 1.362 angstroms resolution.
To Be Published
1J0X
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BU of 1j0x by Molmil
Crystal structure of the rabbit muscle glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, glyceraldehyde-3-phosphate dehydrogenase
Authors:Cowan-Jacob, S.W, Kaufmann, M, Anselmo, A.N, Stark, W, Grutter, M.G.
Deposit date:2002-11-25
Release date:2003-12-09
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of rabbit-muscle glyceraldehyde-3-phosphate dehydrogenase.
Acta Crystallogr.,Sect.D, 59, 2003
4LHC
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BU of 4lhc by Molmil
Crystal structure of Synechocystis sp. PCC 6803 glycine decarboxylase (P-protein), holo form with pyridoxal-5'-phosphate and glycine
Descriptor: 1,2-ETHANEDIOL, BICARBONATE ION, BICINE, ...
Authors:Hasse, D, Andersson, E, Carlsson, G, Masloboy, A, Hagemann, M, Bauwe, H, Andersson, I.
Deposit date:2013-07-01
Release date:2013-10-16
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.899 Å)
Cite:Structure of the Homodimeric Glycine Decarboxylase P-protein from Synechocystis sp. PCC 6803 Suggests a Mechanism for Redox Regulation.
J.Biol.Chem., 288, 2013
4JPN
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BU of 4jpn by Molmil
Bacteriophage phiX174 H protein residues 143-221
Descriptor: Minor spike protein H
Authors:Sun, L, Young, L.N, Boudko, S.B, Fokine, A, Zhang, X, Rossmann, M.G, Fane, B.A.
Deposit date:2013-03-19
Release date:2013-12-11
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.101 Å)
Cite:Icosahedral bacteriophage Phi X174 forms a tail for DNA transport during infection.
Nature, 505, 2014
5BNN
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BU of 5bnn by Molmil
Crystal structure of human enterovirus D68 in complex with 6'SL
Descriptor: Capsid protein VP1, Capsid protein VP2, Capsid protein VP3, ...
Authors:Liu, Y, Sheng, J, Meng, G, Xiao, C, Rossmann, M.G.
Deposit date:2015-05-26
Release date:2015-11-18
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Sialic acid-dependent cell entry of human enterovirus D68.
Nat Commun, 6, 2015
3J2Z
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BU of 3j2z by Molmil
Electron Cryo-microscopy of Chikungunya VLP in complex with neutralizing antibody Fab m10
Descriptor: m10 heavy chain, m10 light chain
Authors:Sun, S, Xiang, Y, Rossmann, M.G.
Deposit date:2013-01-28
Release date:2013-04-24
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (16.9 Å)
Cite:Structural analyses at pseudo atomic resolution of Chikungunya virus and antibodies show mechanisms of neutralization.
Elife, 2, 2013
3J42
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BU of 3j42 by Molmil
Obstruction of Dengue Virus Maturation by Fab Fragments of the 2H2 Antibody
Descriptor: Envelope protein E, Ig heavy chain V region MOPC 21, Igh protein chimera, ...
Authors:Wang, Z, Pennington, J.G, Jiang, W, Rossmann, M.G.
Deposit date:2013-06-13
Release date:2013-07-17
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (21 Å)
Cite:Obstruction of Dengue Virus Maturation by Fab Fragments of the 2H2 Antibody.
J.Virol., 87, 2013
1IJG
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BU of 1ijg by Molmil
Structure of the Bacteriophage phi29 Head-Tail Connector Protein
Descriptor: UPPER COLLAR PROTEIN
Authors:Simpson, A.A, Leiman, P.G, Tao, Y, He, Y, Badasso, M, Jardine, P.J, Anderson, D.L, Rossmann, M.G.
Deposit date:2001-04-26
Release date:2001-05-09
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure determination of the head-tail connector of bacteriophage phi29.
Acta Crystallogr.,Sect.D, 57, 2001
2VCD
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BU of 2vcd by Molmil
Solution structure of the FKBP-domain of Legionella pneumophila Mip in complex with rapamycin
Descriptor: Outer membrane protein MIP, RAPAMYCIN IMMUNOSUPPRESSANT DRUG
Authors:Ceymann, A, Horstmann, M, Ehses, P, Schweimer, K, Paschke, A.-K, Fischer, G, Roesch, P, Faber, C.
Deposit date:2007-09-20
Release date:2008-09-02
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structure of the Legionella pneumophila Mip-rapamycin complex.
BMC Struct. Biol., 8, 2008
8BC6
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BU of 8bc6 by Molmil
Cereblon isoform 4 from Magnetospirillum gryphiswaldense in complex an aspartimide degron peptide
Descriptor: Cereblon isoform 4, GLN-MET-GLN-SNN, PHOSPHATE ION, ...
Authors:Heim, C, Hartmann, M.D.
Deposit date:2022-10-15
Release date:2023-01-11
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Identification and structural basis of C-terminal cyclic imides as natural degrons for cereblon.
Biochem.Biophys.Res.Commun., 637, 2022
1MXD
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BU of 1mxd by Molmil
Structure of a (Ca,Zn)-dependent alpha-amylase from the hyperthermophilic archaeon Pyrococcus woesei
Descriptor: 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, ACETATE ION, CALCIUM ION, ...
Authors:Linden, A, Mayans, O, Meyer-Klaucke, W, Antranikian, G, Wilmanns, M.
Deposit date:2002-10-02
Release date:2003-06-10
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Differential Regulation of a Hyperthermophilic alpha-Amylase with a Novel (Ca,Zn) Two-metal Center by Zinc
J.Biol.Chem., 278, 2003
1MXG
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BU of 1mxg by Molmil
Crystal Structure of a (Ca,Zn)-dependent alpha-amylase from the hyperthermophilic archaeon Pyrococcus woesei in complex with acarbose
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-{2-[2-2-(METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, ...
Authors:Linden, A, Mayans, O, Meyer-Klaucke, W, Antranikian, G, Wilmanns, M.
Deposit date:2002-10-02
Release date:2003-06-10
Last modified:2020-09-09
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Differential Regulation of a Hyperthermophilic alpha-Amylase with a Novel (Ca,Zn) Two-metal Center by Zinc
J.Biol.Chem., 278, 2003
6HCI
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BU of 6hci by Molmil
Crystal structure of titin M3 domain
Descriptor: SULFATE ION, Titin
Authors:Chatziefthimiou, S.D, Ugurlar, D, Wilmanns, M.
Deposit date:2018-08-15
Release date:2019-08-28
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Structural diversity in the atomic resolution 3D fingerprint of the titin M-band segment.
Plos One, 14, 2019
8C3H
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BU of 8c3h by Molmil
Cereblon isoform 4 from Magnetospirillum gryphiswaldense in complex a long aspartimide degron peptide
Descriptor: Cereblon isoform 4, P3(40), ZINC ION
Authors:Heim, C, Spring, A.K, Hartmann, M.D.
Deposit date:2022-12-23
Release date:2023-02-08
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Cereblon neo-substrate binding mimics the recognition of the cyclic imide degron.
Biochem.Biophys.Res.Commun., 646, 2023
7PS9
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BU of 7ps9 by Molmil
Cereblon isoform 4 from Magnetospirillum gryphiswaldense in complex with Iberdomide (CC-220)
Descriptor: (3S)-3-[4-({4-[(morpholin-4-yl)methyl]phenyl}methoxy)-1-oxo-1,3-dihydro-2H-isoindol-2-yl]piperidine-2,6-dione, Cereblon isoform 4, ZINC ION
Authors:Heim, C, Hartmann, M.D.
Deposit date:2021-09-22
Release date:2022-03-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:High-resolution structures of the bound effectors avadomide (CC-122) and iberdomide (CC-220) highlight advantages and limitations of the MsCI4 soaking system.
Acta Crystallogr D Struct Biol, 78, 2022
3SHS
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BU of 3shs by Molmil
Three N-terminal domains of the bacteriophage RB49 Highly Immunogenic Outer Capsid protein (Hoc)
Descriptor: Hoc head outer capsid protein, MAGNESIUM ION
Authors:Fokine, A, Islam, M.Z, Zhang, Z, Bowman, V.D, Rao, V.B, Rossmann, M.G.
Deposit date:2011-06-16
Release date:2011-06-29
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.951 Å)
Cite:Structure of the three N-terminal immunoglobulin domains of the highly immunogenic outer capsid protein from a T4-like bacteriophage.
J.Virol., 85, 2011
6HX3
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BU of 6hx3 by Molmil
PDX1.2/PDX1.3 complex
Descriptor: Pyridoxal 5'-phosphate synthase subunit PDX1.3, Pyridoxal 5'-phosphate synthase-like subunit PDX1.2, SULFATE ION
Authors:Robinson, G.C, Kaufmann, M, Roux, C, Martinez-Font, J, Hothorn, M, Thore, S, Fitzpatrick, T.B.
Deposit date:2018-10-15
Release date:2019-04-17
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the pseudoenzyme PDX1.2 in complex with its cognate enzyme PDX1.3: a total eclipse.
Acta Crystallogr D Struct Biol, 75, 2019

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