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PDB: 1205 results

2WI9
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Selective oxidation of carbolide C-H bonds by engineered macrolide P450 monooxygenase
Descriptor: CYCLODODECYL 3,4,6-TRIDEOXY-3-(DIMETHYLAMINO)-BETA-D-XYLO-HEXOPYRANOSIDE, CYTOCHROME P450 HYDROXYLASE PIKC, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Li, S, Chaulagain, M.R, Knauff, A.R, Podust, L.M, Montgomery, J, Sherman, D.H.
Deposit date:2009-05-08
Release date:2009-10-27
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Selective Oxidation of Carbolide C-H Bonds by an Engineered Macrolide P450 Mono-Oxygenase.
Proc.Natl.Acad.Sci.USA, 106, 2009
2XK5
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Crystal structure of K6-linked diubiquitin
Descriptor: UBIQUITIN, ZINC ION
Authors:Virdee, S, Chin, J.W, Komander, D.
Deposit date:2010-07-07
Release date:2010-08-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:Engineered Diubiquitin Synthesis Reveals K29-Isopeptide Specificity of an Otu Deubiquitinase
Nat.Chem.Biol., 6, 2010
1HA5
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Structural features of a zinc-binding site in the superantigen streptococcal pyrogenic exotoxin A (SpeA1): implications for MHC class II recognition.
Descriptor: STREPTOCOCCAL PYOGENIC EXOTOXIN A1, ZINC ION
Authors:Baker, M.D, Gutman, D.M, Papageorgiou, A.C, Collins, C.M, Acharya, K.R.
Deposit date:2001-03-28
Release date:2002-04-03
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.82 Å)
Cite:Structural Features of a Zinc Binding Site in the Superantigen Strepococcal Pyrogenic Exotoxin a (Spea1): Implications for Mhc Class II Recognition.
Protein Sci., 10, 2001
3X0W
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Crystal structure of PLEKHM1 LIR-fused human LC3B_2-119
Descriptor: Microtubule-associated proteins 1A/1B light chain 3B
Authors:Suzuki, H, McEwan, D.G, Popovic, D, Gubas, A, Terawaki, S, Stadel, D, Coxon, F, Stegmann, D.M, Bhogaraju, S, Maddi, K, Kirchhoff, A, Gatti, E, Helfrich, M.H, Behrends, C, Pierre, P, Dikic, I, Wakatsuki, S.
Deposit date:2014-10-22
Release date:2015-01-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:PLEKHM1 regulates autophagosome-lysosome fusion through HOPS complex and LC3/GABARAP proteins.
Mol.Cell, 57, 2015
2XO8
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Crystal Structure of Myosin-2 in Complex with Tribromodichloropseudilin
Descriptor: 2,4-DICHLORO-6-(3,4,5-TRIBROMO-1H-PYRROL-2-YL)PHENOL, ADP METAVANADATE, MAGNESIUM ION, ...
Authors:Preller, M, Chinthalapudi, K, Martin, R, Knoelker, H.J, Manstein, D.J.
Deposit date:2010-08-10
Release date:2011-05-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Inhibition of Myosin ATPase Activity by Halogenated Pseudilins: A Structure-Activity Study.
J.Med.Chem., 54, 2011
2XEW
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Crystal structure of K11-linked diubiquitin
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, CITRATE ANION, ...
Authors:Bremm, A, Freund, S.M.V, Komander, D.
Deposit date:2010-05-18
Release date:2010-07-14
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Lys11-Linked Ubiquitin Chains Adopt Compact Conformations and are Preferentially Hydrolyzed by the Deubiquitinase Cezanne
Nat.Struct.Mol.Biol., 17, 2010
1FVT
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THE STRUCTURE OF CYCLIN-DEPENDENT KINASE 2 (CDK2) IN COMPLEX WITH AN OXINDOLE INHIBITOR
Descriptor: 4-[(2Z)-2-(5-bromo-2-oxo-1,2-dihydro-3H-indol-3-ylidene)hydrazinyl]benzene-1-sulfonamide, CELL DIVISION PROTEIN KINASE 2
Authors:Davis, S.T, Benson, B.G, Bramson, H.N, Chapman, D.E, Dickerson, S.H, Dold, K.M, Eberwein, D.J, Edelstein, M, Frye, S.V, Gampe Jr, R.T, Griffin, R.J, Harris, P.A, Hassell, A.M, Holmes, W.D, Hunter, R.N, Knick, V.B, Lackey, K, Lovejoy, B, Luzzio, M.J, Murray, D, Parker, P, Rocque, W.J, Shewchuk, L, Veal, J.M, Walker, D.H, Kuyper, L.K.
Deposit date:2000-09-20
Release date:2001-01-17
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Prevention of chemotherapy-induced alopecia in rats by CDK inhibitors.
Science, 291, 2001
2Y5B
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Structure of USP21 in complex with linear diubiquitin-aldehyde
Descriptor: SULFATE ION, UBIQUITIN, UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 21, ...
Authors:Ye, Y, Akutsu, M, Reyes-Turcu, F, Enchev, R.I, Wilkinson, K.D, Komander, D.
Deposit date:2011-01-12
Release date:2012-01-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Polyubiquitin Binding and Cross-Reactivity in the Usp Domain Deubiquitinase Usp21.
Embo Rep., 12, 2011
1FVV
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THE STRUCTURE OF CDK2/CYCLIN A IN COMPLEX WITH AN OXINDOLE INHIBITOR
Descriptor: 4-[(7-OXO-7H-THIAZOLO[5,4-E]INDOL-8-YLMETHYL)-AMINO]-N-PYRIDIN-2-YL-BENZENESULFONAMIDE, CYCLIN A, CYCLIN-DEPENDENT KINASE 2
Authors:Davis, S.T, Benson, B.G, Bramson, H.N, Chapman, D.E, Dickerson, S.H, Dold, K.M, Eberwein, D.J, Edelstein, M, Frye, S.V, Gampe Jr, R.T, Griffin, R.J, Harris, P.A, Hassell, A.M, Holmes, W.D, Hunter, R.N, Knick, V.B, Lackey, K, Lovejoy, B, Luzzio, M.J, Murray, D, Parker, P, Rocque, W.J, Shewchuk, L, Veal, J.M, Walker, D.H, Kuyper, L.K.
Deposit date:2000-09-20
Release date:2001-01-17
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Prevention of chemotherapy-induced alopecia in rats by CDK inhibitors.
Science, 291, 2001
1LYQ
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Crystal Structure of PcoC, a Methionine Rich Copper Resistance Protein from Escherichia coli
Descriptor: GLYCEROL, PcoC copper resistance protein
Authors:Wernimont, A.K, Huffman, D.L, Finney, L.A, Demeler, B, O'Halloran, T.V, Rosenzweig, A.C.
Deposit date:2002-06-07
Release date:2002-11-27
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure and dimerization equilibria of PcoC, a methionine-rich copper resistance protein from Escherichia coli
J.BIOL.INORG.CHEM., 8, 2003
1EBM
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BU of 1ebm by Molmil
CRYSTAL STRUCTURE OF THE HUMAN 8-OXOGUANINE GLYCOSYLASE (HOGG1) BOUND TO A SUBSTRATE OLIGONUCLEOTIDE
Descriptor: 8-OXOGUANINE DNA GLYCOSYLASE, CALCIUM ION, DNA (5'-D(*GP*CP*GP*TP*CP*CP*AP*(8OG)P*GP*TP*CP*TP*AP*CP*C)-3'), ...
Authors:Bruner, S.D, Norman, D.P, Verdine, G.L.
Deposit date:2000-01-24
Release date:2000-03-20
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis for recognition and repair of the endogenous mutagen 8-oxoguanine in DNA.
Nature, 403, 2000
1IX2
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BU of 1ix2 by Molmil
Crystal Structure of Selenomethionine PcoC, a Copper Resistance Protein from Escherichia coli
Descriptor: PcoC copper resistance protein
Authors:Wernimont, A.K, Huffman, D.L, Finney, L.A, Demeler, B, O'Halloran, T.V, Rosenzweig, A.C.
Deposit date:2002-06-10
Release date:2002-11-27
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal structure and dimerization equilibria of PcoC, a methionine-rich copper resistance protein from Escherichia coli
J.BIOL.INORG.CHEM., 8, 2003
1F2Z
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BU of 1f2z by Molmil
SIMPLIFICATION OF A PROTEIN LOOP IN STAPHYLOCOCCAL NUCLEASE
Descriptor: STAPHYLOCOCCAL NUCLEASE
Authors:Hodel, A, Harkins, P.C, Adelman, D.M, White, M.A, Fox, R.O.
Deposit date:2000-05-31
Release date:2003-09-16
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Simplification of a Protein Loop in Staphylococcal Nuclease
To be Published
1HXS
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BU of 1hxs by Molmil
CRYSTAL STRUCTURE OF MAHONEY STRAIN OF POLIOVIRUS AT 2.2A RESOLUTION
Descriptor: GENOME POLYPROTEIN, COAT PROTEIN VP1, COAT PROTEIN VP2, ...
Authors:Miller, S.T, Hogle, J.M, Filman, D.J.
Deposit date:2001-01-16
Release date:2002-01-16
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Ab initio phasing of high-symmetry macromolecular complexes: successful phasing of authentic poliovirus data to 3.0 A resolution.
J.Mol.Biol., 307, 2001
6TSL
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BU of 6tsl by Molmil
Marasmius oreades agglutinin (MOA) in complex with the truncated PVPRAHS synthetic substrate
Descriptor: 1,2-ETHANEDIOL, Agglutinin, CALCIUM ION, ...
Authors:Cordara, G, Manna, D, Krengel, U.
Deposit date:2019-12-20
Release date:2020-07-29
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structure of MOA in complex with a peptide fragment: A protease caught in flagranti .
Curr Res Struct Biol, 2, 2020
2QKC
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Structural and Kinetic Study of the Differences between Human and E.coli Manganese Superoxide Dismutases
Descriptor: MANGANESE (II) ION, Superoxide dismutase [Mn]
Authors:Zheng, J, Domsic, J.F, Cabelli, D, McKenna, R, Silverman, D.N.
Deposit date:2007-07-10
Release date:2008-07-29
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural and kinetic study of differences between human and Escherichia coli manganese superoxide dismutases.
Biochemistry, 46, 2007
6TSR
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BU of 6tsr by Molmil
Marasmius oreades agglutinin (MOA) activated by manganese (II) and calcium
Descriptor: 1,2-ETHANEDIOL, Agglutinin, CALCIUM ION, ...
Authors:Cordara, G, Manna, D, Krengel, U.
Deposit date:2019-12-21
Release date:2020-07-29
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of MOA in complex with a peptide fragment: A protease caught in flagranti .
Curr Res Struct Biol, 2, 2020
6TSM
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Marasmius oreades agglutinin (MOA) in complex with the truncated PVVRAHS synthetic substrate
Descriptor: 1,2-ETHANEDIOL, Agglutinin, CALCIUM ION, ...
Authors:Cordara, G, Manna, D, Krengel, U.
Deposit date:2019-12-20
Release date:2020-07-29
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structure of MOA in complex with a peptide fragment: A protease caught in flagranti .
Curr Res Struct Biol, 2, 2020
3UP3
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BU of 3up3 by Molmil
Nuclear receptor DAF-12 from hookworm Ancylostoma ceylanicum in complex with (25S)-cholestenoic acid
Descriptor: (8alpha,10alpha,25S)-3-hydroxycholesta-3,5-dien-26-oic acid, 1,2-ETHANEDIOL, Nuclear receptor coactivator 2, ...
Authors:Zhi, X, Zhou, X.E, Melcher, K, Motola, D.L, Gelmedin, V, Hawdon, J, Kliewer, S.A, Mangelsdorf, D.J, Xu, H.E.
Deposit date:2011-11-17
Release date:2011-12-14
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Structural Conservation of Ligand Binding Reveals a Bile Acid-like Signaling Pathway in Nematodes.
J.Biol.Chem., 287, 2012
3E4B
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Crystal structure of AlgK from Pseudomonas fluorescens WCS374r
Descriptor: AlgK, CHLORIDE ION, GLYCEROL
Authors:Keiski, C.-L, Harwich, M, Jain, S, Neculai, A.M, Yip, P, Robinson, H, Whitney, J.C, Burrows, L.L, Ohman, D.E, Howell, P.L.
Deposit date:2008-08-11
Release date:2009-08-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:AlgK is a TPR-containing protein and the periplasmic component of a novel exopolysaccharide secretin.
Structure, 18, 2010
4KR8
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BU of 4kr8 by Molmil
Salmonella typhi OmpF complex with Daunomycin
Descriptor: DAUNOMYCIN, Outer membrane protein F
Authors:Madhuranayaki, T, Balasubramaniam, D, Krishnaswamy, S.
Deposit date:2013-05-16
Release date:2014-05-28
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Salmonella typhi OmpF complex with Daunomycin
To be published
3E54
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BU of 3e54 by Molmil
Archaeal Intron-encoded Homing Endonuclease I-Vdi141I Complexed With DNA
Descriptor: DNA (5'-D(*DCP*DTP*DGP*DAP*DCP*DTP*DCP*DTP*DCP*DTP*DTP*DAP*DA)-3'), DNA (5'-D(*DTP*DTP*DGP*DGP*DCP*DTP*DAP*DCP*DCP*DTP*DTP*DAP*DA)-3'), DNA (5'-D(P*DGP*DAP*DGP*DAP*DGP*DTP*DCP*DAP*DG)-3'), ...
Authors:Nomura, N, Nomura, Y, Sussman, D, Stoddard, B.L.
Deposit date:2008-08-13
Release date:2008-12-30
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Recognition of a common rDNA target site in archaea and eukarya by analogous LAGLIDADG and His-Cys box homing endonucleases
Nucleic Acids Res., 36, 2008
5KNP
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BU of 5knp by Molmil
Crystal structure of Mycobacterium tuberculosis hypoxanthine guanine phosphoribosyltransferase in complex with [3S,4R]-(4-(Hypoxanthin-9-yl)pyrrolidin-3-yl)-oxymethanephosphonic acid
Descriptor: Hypoxanthine-guanine phosphoribosyltransferase, MAGNESIUM ION, PYROPHOSPHATE 2-, ...
Authors:Eng, W.S, Rejman, D, Keough, D.T, Guddat, L.W.
Deposit date:2016-06-28
Release date:2017-09-20
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Crystal structure of Mycobacterium tuberculosis hypoxanthine guanine phosphoribosyltransferase in complex with pyrrolidine nucleoside phosphonate
To Be Published
1EM1
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BU of 1em1 by Molmil
X-RAY CRYSTAL STRUCTURE FOR HUMAN MANGANESE SUPEROXIDE DISMUTASE, Q143A
Descriptor: MANGANESE (II) ION, MANGANESE SUPEROXIDE DISMUTASE, SULFATE ION
Authors:Leveque, V, Stroupe, M.E, Lepock, J.R, Cabelli, D.E, Tainer, J.A, Nick, H.S, Silverman, D.N.
Deposit date:2000-03-14
Release date:2000-03-24
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Multiple replacements of glutamine 143 in human manganese superoxide dismutase: effects on structure, stability, and catalysis.
Biochemistry, 39, 2000
8T71
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Crystal Structure of WT KRAS4a with bound GDP and Mg ion
Descriptor: GTPase KRas, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION
Authors:Tran, T.H, Whitley, M.J, Dharmaiah, S, Simanshu, D.K.
Deposit date:2023-06-19
Release date:2024-02-14
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Comparative analysis of KRAS4a and KRAS4b splice variants reveals distinctive structural and functional properties.
Sci Adv, 10, 2024

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