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PDB: 247 件
4XTQ
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Crystal structure of a mutant (C20S) of a near-infrared fluorescent protein BphP1-FP
分子名称: 3-[2-[(Z)-[5-[(Z)-[(3R,4R)-3-ethenyl-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-pyrrol-2-ylidene]methyl]-5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-1H-pyrrol-3-yl]propanoic acid, BphP1-FP/C20S, CHLORIDE ION
著者Pletnev, S, Malashkevich, V.N.
登録日2015-01-23
公開日2015-12-09
最終更新日2019-12-04
実験手法X-RAY DIFFRACTION (1.64 Å)
主引用文献Molecular Basis of Spectral Diversity in Near-Infrared Phytochrome-Based Fluorescent Proteins.
Chem.Biol., 22, 2015
1FBM
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ASSEMBLY DOMAIN OF CARTILAGE OLIGOMERIC MATRIX PROTEIN IN COMPLEX WITH ALL-TRANS RETINOL
分子名称: PROTEIN (CARTILAGE OLIGOMERIC MATRIX PROTEIN), RETINOL
著者Guo, Y, Bozic, D, Malashkevich, V.N, Kammerer, R.A, Schulthess, T.
登録日2000-07-16
公開日2000-08-02
最終更新日2018-02-28
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献All-trans retinol, vitamin D and other hydrophobic compounds bind in the axial pore of the five-stranded coiled-coil domain of cartilage oligomeric matrix protein.
EMBO J., 17, 1998
1PIQ
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BU of 1piq by Molmil
CRYSTAL STRUCTURE OF GCN4-PIQ, A TRIMERIC COILED COIL WITH BURIED POLAR RESIDUES
分子名称: CHLORIDE ION, PROTEIN (GENERAL CONTROL PROTEIN GCN4-PIQ)
著者Eckert, D.M, Malashkevich, V.N, Kim, P.S.
登録日1998-09-25
公開日1998-09-30
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of GCN4-pIQI, a trimeric coiled coil with buried polar residues.
J.Mol.Biol., 284, 1998
1CZQ
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BU of 1czq by Molmil
CRYSTAL STRUCTURE OF THE D10-P1/IQN17 COMPLEX: A D-PEPTIDE INHIBITOR OF HIV-1 ENTRY BOUND TO THE GP41 COILED-COIL POCKET.
分子名称: CHLORIDE ION, D-PEPTIDE INHIBITOR, FUSION PROTEIN BETWEEN THE HYDROPHOBIC POCKET OF HIV GP41 AND GCN4-PIQI
著者Eckert, D.M, Malashkevich, V.N, Hong, L.H, Carr, P.A, Kim, P.S.
登録日1999-09-06
公開日1999-10-13
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Inhibiting HIV-1 entry: discovery of D-peptide inhibitors that target the gp41 coiled-coil pocket.
Cell(Cambridge,Mass.), 99, 1999
1DV8
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BU of 1dv8 by Molmil
CRYSTAL STRUCTURE OF THE CARBOHYDRATE RECOGNITION DOMAIN OF THE H1 SUBUNIT OF THE ASIALOGLYCOPROTEIN RECEPTOR
分子名称: ASIALOGLYCOPROTEIN RECEPTOR 1, CALCIUM ION, CHLORIDE ION
著者Meier, M, Bider, M.D, Malashkevich, V.N, Spiess, M, Burkhard, P.
登録日2000-01-20
公開日2000-07-26
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of the carbohydrate recognition domain of the H1 subunit of the asialoglycoprotein receptor.
J.Mol.Biol., 300, 2000
1G2C
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BU of 1g2c by Molmil
HUMAN RESPIRATORY SYNCYTIAL VIRUS FUSION PROTEIN CORE
分子名称: FUSION PROTEIN (F)
著者Zhao, X, Singh, M, Malashkevich, V.N, Kim, P.S.
登録日2000-10-18
公開日2001-01-03
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural characterization of the human respiratory syncytial virus fusion protein core.
Proc.Natl.Acad.Sci.USA, 97, 2000
1AAT
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BU of 1aat by Molmil
OXOGLUTARATE-INDUCED CONFORMATIONAL CHANGES IN CYTOSOLIC ASPARTATE AMINOTRANSFERASE
分子名称: CYTOSOLIC ASPARTATE AMINOTRANSFERASE
著者Harutyunyan, E.G, Malashkevich, V.N.
登録日1982-04-23
公開日1982-10-21
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Conformational changes in cytosol aspartate aminotransferase induced by oxoglutarate
DOKL.AKAD.NAUK SSSR, 267, 1982
1JS3
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BU of 1js3 by Molmil
Crystal structure of dopa decarboxylase in complex with the inhibitor carbidopa
分子名称: CARBIDOPA, DOPA decarboxylase, PYRIDOXAL-5'-PHOSPHATE, ...
著者Burkhard, P, Dominici, P, Borri-Voltattorni, C, Jansonius, J.N, Malashkevich, V.N.
登録日2001-08-16
公開日2001-10-26
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structural insight into Parkinson's disease treatment from drug-inhibited DOPA decarboxylase.
Nat.Struct.Biol., 8, 2001
1JS6
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Crystal Structure of DOPA decarboxylase
分子名称: DOPA decarboxylase, PYRIDOXAL-5'-PHOSPHATE
著者Burkhard, P, Dominici, P, Borri-Voltattorni, C, Jansonius, J.N, Malashkevich, V.N.
登録日2001-08-16
公開日2001-10-26
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural insight into Parkinson's disease treatment from drug-inhibited DOPA decarboxylase.
Nat.Struct.Biol., 8, 2001
2GSH
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BU of 2gsh by Molmil
Crystal structure of L-rhamnonate dehydratase from Salmonella typhimurium
分子名称: GLYCEROL, L-RHAMNONATE DEHYDRATASE, MAGNESIUM ION
著者Patskovsky, Y, Malashkevich, V.N, Sauder, J.M, Dickey, M, Adams, J.M, Wasserman, S.R, Gerlt, J, Almo, S.C, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2006-04-26
公開日2006-05-09
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.393 Å)
主引用文献Crystal Structure of L-rhamnonate dehydratase from Salmonella Typhimurium Lt2
To be Published
1IJ3
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BU of 1ij3 by Molmil
GCN4-pVSL Coiled-coil trimer with Serine at the a(16) position
分子名称: general control protein GCN4
著者Akey, D.L, Malashkevich, V.N, Kim, P.S.
登録日2001-04-24
公開日2001-08-08
最終更新日2021-10-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Buried polar residues in coiled-coil interfaces.
Biochemistry, 40, 2001
1IJ2
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GCN4-pVTL Coiled-coil Trimer with Threonine at the a(16) position
分子名称: CADMIUM ION, GENERAL CONTROL PROTEIN GCN4
著者Akey, D.L, Malashkevich, V.N, Kim, P.S.
登録日2001-04-24
公開日2001-08-08
最終更新日2021-10-27
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Buried polar residues in coiled-coil interfaces.
Biochemistry, 40, 2001
1IJ0
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BU of 1ij0 by Molmil
Coiled Coil Trimer GCN4-pVLS Ser at Buried D Position
分子名称: GENERAL CONTROL PROTEIN GCN4, ZINC ION
著者Akey, D.L, Malashkevich, V.N, Kim, P.S.
登録日2001-04-24
公開日2001-08-08
最終更新日2021-10-27
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Buried polar residues in coiled-coil interfaces.
Biochemistry, 40, 2001
1IJ1
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BU of 1ij1 by Molmil
GCN4-pVLT Coiled-coil Trimer with Threonine at the d(12) Position
分子名称: GENERAL CONTROL PROTEIN GCN4, ZINC ION
著者Akey, D.L, Malashkevich, V.N, Kim, P.S.
登録日2001-04-24
公開日2001-08-08
最終更新日2021-10-27
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Buried polar residues in coiled-coil interfaces.
Biochemistry, 40, 2001
1K1F
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BU of 1k1f by Molmil
Structure of the Bcr-Abl Oncoprotein Oligomerization domain
分子名称: BREAKPOINT CLUSTER REGION PROTEIN
著者Zhao, X, Ghaffari, S, Lodish, H, Malashkevich, V.N, Kim, P.S.
登録日2001-09-25
公開日2002-02-06
最終更新日2021-10-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure of the Bcr-Abl oncoprotein oligomerization domain.
Nat.Struct.Biol., 9, 2002
1KD8
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BU of 1kd8 by Molmil
X-RAY STRUCTURE OF THE COILED COIL GCN4 ACID BASE HETERODIMER ACID-d12Ia16V BASE-d12La16L
分子名称: GCN4 ACID BASE HETERODIMER ACID-d12Ia16V, GCN4 ACID BASE HETERODIMER BASE-d12La16L
著者Keating, A.E, Malashkevich, V.N, Tidor, B, Kim, P.S.
登録日2001-11-12
公開日2001-11-28
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Side-chain repacking calculations for predicting structures and stabilities of heterodimeric coiled coils.
Proc.Natl.Acad.Sci.USA, 98, 2001
1KD9
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BU of 1kd9 by Molmil
X-RAY STRUCTURE OF THE COILED COIL GCN4 ACID BASE HETERODIMER ACID-d12La16L BASE-d12La16L
分子名称: GCN4 ACID BASE HETERODIMER ACID-d12La16L, GCN4 ACID BASE HETERODIMER BASE-d12La16L
著者Keating, A.E, Malashkevich, V.N, Tidor, B, Kim, P.S.
登録日2001-11-12
公開日2001-11-28
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Side-chain repacking calculations for predicting structures and stabilities of heterodimeric coiled coils.
Proc.Natl.Acad.Sci.USA, 98, 2001
1KDD
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BU of 1kdd by Molmil
X-ray structure of the coiled coil GCN4 ACID BASE HETERODIMER ACID-d12La16I BASE-d12La16L
分子名称: GCN4 ACID BASE HETERODIMER ACID-d12La16I, GCN4 ACID BASE HETERODIMER BASE-d12La16L
著者Keating, A.E, Malashkevich, V.N, Tidor, B, Kim, P.S.
登録日2001-11-12
公開日2001-11-28
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.14 Å)
主引用文献Side-chain repacking calculations for predicting structures and stabilities of heterodimeric coiled coils.
Proc.Natl.Acad.Sci.USA, 98, 2001
2PKD
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BU of 2pkd by Molmil
Crystal structure of CD84: Insite into SLAM family function
分子名称: CHLORIDE ION, SLAM family member 5
著者Yan, Q, Malashkevich, V.N, Fedorov, A, Cao, E, Lary, J.W, Cole, J.L, Nathenson, S.G, Almo, S.C.
登録日2007-04-17
公開日2007-06-26
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.043 Å)
主引用文献Structure of CD84 provides insight into SLAM family function.
Proc.Natl.Acad.Sci.Usa, 104, 2007
3FOM
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BU of 3fom by Molmil
Crystal structure of the Class I MHC Molecule H-2Kwm7 with a Single Self Peptide IQQSIERL
分子名称: 8 residue synthetic peptide, Beta-2-microglobulin, CHLORIDE ION, ...
著者Brims, D.R, Qian, J, Jarchum, I, Yamada, T, Mikesh, L, Palmieri, E, Lund, T, Hattori, M, Shabanowitz, J, Hunt, D.F, Ramagopal, U.A, Malashkevich, V.N, Almo, S.C, Nathenson, S.G, DiLorenzo, T.P.
登録日2008-12-30
公開日2010-01-12
最終更新日2017-11-01
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Predominant occupation of the class I MHC molecule H-2Kwm7 with a single self-peptide suggests a mechanism for its diabetes-protective effect.
Int.Immunol., 22, 2010
3FOL
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BU of 3fol by Molmil
Crystal structure of the Class I MHC Molecule H-2Kwm7 with a Single Self Peptide VNDIFERI
分子名称: 8 residue synthetic peptide, Beta-2-microglobulin, MHC
著者Brims, D.R, Qian, J, Jarchum, I, Yamada, T, Mikesh, L, Palmieri, E, Lund, T, Hattori, M, Shabanowitz, J, Hunt, D.F, Ramagopal, U.A, Malashkevich, V.N, Almo, S.C, Nathenson, S.G, DiLorenzo, T.P.
登録日2008-12-30
公開日2010-01-12
最終更新日2017-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Predominant occupation of the class I MHC molecule H-2Kwm7 with a single self-peptide suggests a mechanism for its diabetes-protective effect
Int.Immunol., 22, 2010
3ME5
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BU of 3me5 by Molmil
Crystal structure of putative dna cytosine methylase from shigella flexneri 2a str. 2457T
分子名称: Cytosine-specific methyltransferase
著者Ramagopal, U.A, Malashkevich, V.N, Toro, R, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2010-03-31
公開日2010-04-21
最終更新日2021-02-10
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystal structure of putative dna cytosine methylase from shigella flexneri 2a str. 2457T
To be Published

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