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PDB: 105 results

1HSA
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THE THREE-DIMENSIONAL STRUCTURE OF HLA-B27 AT 2.1 ANGSTROMS RESOLUTION SUGGESTS A GENERAL MECHANISM FOR TIGHT PEPTIDE BINDING TO MHC
Descriptor: BETA 2-MICROGLOBULIN, CLASS I HISTOCOMPATIBILITY ANTIGEN (HLA-B*2705), MODEL PEPTIDE SEQUENCE - ARAAAAAAA
Authors:Madden, D.R, Gorga, J.C, Strominger, J.L, Wiley, D.C.
Deposit date:1992-08-11
Release date:1992-10-15
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The three-dimensional structure of HLA-B27 at 2.1 A resolution suggests a general mechanism for tight peptide binding to MHC.
Cell(Cambridge,Mass.), 70, 1992
1HHJ
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THE ANTIGENIC IDENTITY OF PEPTIDE(SLASH)MHC COMPLEXES: A COMPARISON OF THE CONFORMATION OF FIVE PEPTIDES PRESENTED BY HLA-A2
Descriptor: BETA 2-MICROGLOBULIN, CLASS I HISTOCOMPATIBILITY ANTIGEN (HLA-A*0201) (ALPHA CHAIN), HIV-1 REVERSE TRANSCRIPTASE (RESIDUES 309-317)
Authors:Madden, D.R, Garboczi, D.N, Wiley, D.C.
Deposit date:1993-06-30
Release date:1993-10-31
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The antigenic identity of peptide-MHC complexes: a comparison of the conformations of five viral peptides presented by HLA-A2.
Cell(Cambridge,Mass.), 75, 1993
1HHG
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BU of 1hhg by Molmil
THE ANTIGENIC IDENTITY OF PEPTIDE(SLASH)MHC COMPLEXES: A COMPARISON OF THE CONFORMATION OF FIVE PEPTIDES PRESENTED BY HLA-A2
Descriptor: BETA 2-MICROGLOBULIN, CLASS I HISTOCOMPATIBILITY ANTIGEN (HLA-A*0201) (ALPHA CHAIN), HIV-1 GP120 ENVELOPE PROTEIN (RESIDUES 195-207)
Authors:Madden, D.R, Garboczi, D.N, Wiley, D.C.
Deposit date:1993-06-30
Release date:1993-10-31
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The antigenic identity of peptide-MHC complexes: a comparison of the conformations of five viral peptides presented by HLA-A2.
Cell(Cambridge,Mass.), 75, 1993
1HHK
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BU of 1hhk by Molmil
THE ANTIGENIC IDENTITY OF PEPTIDE(SLASH)MHC COMPLEXES: A COMPARISON OF THE CONFORMATION OF FIVE PEPTIDES PRESENTED BY HLA-A2
Descriptor: BETA 2-MICROGLOBULIN, CLASS I HISTOCOMPATIBILITY ANTIGEN (HLA-A*0201) (ALPHA CHAIN), NONAMERIC PEPTIDE FROM HTLV-1 TAX PROTEIN (RESIDUES 11-19)
Authors:Madden, D.R, Garboczi, D.N, Wiley, D.C.
Deposit date:1993-06-30
Release date:1993-10-31
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The antigenic identity of peptide-MHC complexes: a comparison of the conformations of five viral peptides presented by HLA-A2.
Cell(Cambridge,Mass.), 75, 1993
1HHH
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BU of 1hhh by Molmil
THE ANTIGENIC IDENTITY OF PEPTIDE(SLASH)MHC COMPLEXES: A COMPARISON OF THE CONFORMATION OF FIVE PEPTIDES PRESENTED BY HLA-A2
Descriptor: BETA 2-MICROGLOBULIN, CLASS I HISTOCOMPATIBILITY ANTIGEN (HLA-A*0201) (ALPHA CHAIN), HEPATITIS B NUCLEOCAPSID PROTEIN (RESIDUES 18-27)
Authors:Madden, D.R, Garboczi, D.N, Wiley, D.C.
Deposit date:1993-06-30
Release date:1993-10-31
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (3 Å)
Cite:The antigenic identity of peptide-MHC complexes: a comparison of the conformations of five viral peptides presented by HLA-A2.
Cell(Cambridge,Mass.), 75, 1993
1HHI
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BU of 1hhi by Molmil
THE ANTIGENIC IDENTITY OF PEPTIDE(SLASH)MHC COMPLEXES: A COMPARISON OF THE CONFORMATION OF FIVE PEPTIDES PRESENTED BY HLA-A2
Descriptor: BETA 2-MICROGLOBULIN, CLASS I HISTOCOMPATIBILITY ANTIGEN (HLA-A*0201) (ALPHA CHAIN), INFLUENZA A MATRIX PROTEIN M1 (RESIDUES 58-66)
Authors:Madden, D.R, Garboczi, D.N, Wiley, D.C.
Deposit date:1993-06-30
Release date:1993-10-31
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The antigenic identity of peptide-MHC complexes: a comparison of the conformations of five viral peptides presented by HLA-A2.
Cell(Cambridge,Mass.), 75, 1993
8GJR
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BU of 8gjr by Molmil
Crystal Structure of Nanobody VHH114 Bound to Its Antigen PA14 Cif
Descriptor: CFTR inhibitory factor, CITRATE ANION, Nanobody VHH114
Authors:Simard, A.R, Madden, D.R.
Deposit date:2023-03-16
Release date:2024-06-26
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal Structure of Nanobody VHH114 Bound to Its Antigen PA14 Cif
To Be Published
2V9A
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BU of 2v9a by Molmil
Structure of Citrate-free Periplasmic Domain of Sensor Histidine Kinase CitA
Descriptor: SENSOR KINASE CITA
Authors:Sevvana, M, Vijayan, V, Zweckstetter, M, Reinelt, S, Madden, D.R, Sheldrick, G.M, Bott, M, Griesinger, C, Becker, S.
Deposit date:2007-08-23
Release date:2008-03-25
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:A Ligand-Induced Switch in the Periplasmic Domain of Sensor Histidine Kinase Cita.
J.Mol.Biol., 377, 2008
6NSM
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BU of 6nsm by Molmil
TetR family transcriptional regulator CifR C99T-C107S-C181R Cysteines mutant complexed with 26bp double-strand operator DNA
Descriptor: DNA (26-MER), TetR family transcriptional regulator CifR
Authors:He, S, Madden, D.R.
Deposit date:2019-01-25
Release date:2020-01-29
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Molecular basis for the transcriptional regulation of an epoxide-based virulence circuit in Pseudomonas aeruginosa
Biorxiv, 2024
6NSR
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BU of 6nsr by Molmil
TetR family transcriptional regulator CifR C99T-C181R cysteine mutant complexed with 26bp double-strand operator DNA and apo-CifR C99T-C181R
Descriptor: DNA (26-MER), TetR family transcriptional regulator CifR
Authors:He, S, Taher, N.M, Madden, D.R.
Deposit date:2019-01-25
Release date:2020-01-29
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3 Å)
Cite:Molecular basis for the transcriptional regulation of an epoxide-based virulence circuit in Pseudomonas aeruginosa
Biorxiv, 2024
6O5O
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BU of 6o5o by Molmil
Crystal Structure of the Disabled-2 (Dab2) Dab Homology Domain in Complex with Peptide STA02
Descriptor: ACE-QNGFDNPNYQPQENMQA, Disabled homolog 2, MAGNESIUM ION, ...
Authors:Chavez, M, Madden, D.R.
Deposit date:2019-03-04
Release date:2020-03-11
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal Structure of the Disabled-2 (Dab2) Dab Homology Domain in Complex with Peptide STA02
To Be Published
4YX9
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BU of 4yx9 by Molmil
Crystal structure of the CFTR inhibitory factor Cif bound to tiratricol
Descriptor: CFTR inhibitory factor, [4-(4-HYDROXY-3-IODO-PHENOXY)-3,5-DIIODO-PHENYL]-ACETIC ACID
Authors:Bahl, C.D, Madden, D.R.
Deposit date:2015-03-22
Release date:2015-07-15
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Inhibiting an Epoxide Hydrolase Virulence Factor from Pseudomonas aeruginosa Protects CFTR.
Angew.Chem.Int.Ed.Engl., 54, 2015
3SFJ
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BU of 3sfj by Molmil
Crystal Structure of Tax-Interacting Protein-1 (TIP-1) PDZ domain bound to iCAL36 inhibitor peptide
Descriptor: Tax1-binding protein 3, decameric peptide iCAL36
Authors:Amacher, J.F, Madden, D.R.
Deposit date:2011-06-13
Release date:2012-12-12
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.24 Å)
Cite:A CAL Inhibitor with Single-PDZ Specificity Rescues deltaF508-CFTR
To be Published
6NSN
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BU of 6nsn by Molmil
TetR family transcriptional regulator CifR C99T-C181R Cysteines mutant complexed with 26bp double-strand operator DNA
Descriptor: DNA (26-MER), TetR family transcriptional regulator CifR
Authors:He, S, Madden, D.R.
Deposit date:2019-01-25
Release date:2020-01-29
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Molecular basis for the transcriptional regulation of an epoxide-based virulence circuit in Pseudomonas aeruginosa
Biorxiv, 2024
1P0Z
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BU of 1p0z by Molmil
Sensor Kinase CitA binding domain
Descriptor: CITRATE ANION, MO(VI)(=O)(OH)2 CLUSTER, SODIUM ION, ...
Authors:Reinelt, S, Hofmann, E, Gerharz, T, Bott, M, Madden, D.R.
Deposit date:2003-04-11
Release date:2003-08-19
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The structure of the periplasmic ligand-binding domain of the sensor kinase CitA reveals the first extracellular PAS domain.
J.Biol.Chem., 278, 2003
6OVF
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BU of 6ovf by Molmil
Crystal Structure of the Disabled-2 (Dab2) Dab Homology Domain in Complex with Peptide STA03
Descriptor: Disabled homolog 2, MAGNESIUM ION, NICKEL (II) ION, ...
Authors:Chavez, M, Madden, D.R.
Deposit date:2019-05-07
Release date:2020-05-13
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal Structure of the Disabled-2 (Dab2) Dab Homology Domain in Complex with Peptide STA03
To Be Published
3EN3
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BU of 3en3 by Molmil
Crystal Structure of the GluR4 Ligand-Binding domain in complex with kainate
Descriptor: 3-(CARBOXYMETHYL)-4-ISOPROPENYLPROLINE, Glutamate receptor 4,Glutamate receptor
Authors:Gill, A, Madden, D.R.
Deposit date:2008-09-25
Release date:2009-05-19
Last modified:2017-07-26
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Correlating AMPA receptor activation and cleft closure across subunits: crystal structures of the GluR4 ligand-binding domain in complex with full and partial agonists
Biochemistry, 47, 2008
3EPE
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BU of 3epe by Molmil
Crystal Structure of the GluR4 Ligand-Binding domain in complex with glutamate
Descriptor: GLUTAMIC ACID, Glutamate receptor 4,Glutamate receptor
Authors:Gill, A, Madden, D.R.
Deposit date:2008-09-29
Release date:2009-05-19
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Correlating AMPA receptor activation and cleft closure across subunits: crystal structures of the GluR4 ligand-binding domain in complex with full and partial agonists
Biochemistry, 47, 2008
6OV7
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BU of 6ov7 by Molmil
CFTR Associated Ligand (CAL) PDZ domain bound to peptide kCAL01
Descriptor: Golgi-associated PDZ and coiled-coil motif-containing protein, kCAL01 peptide
Authors:Gill, N.P, Madden, D.R.
Deposit date:2019-05-07
Release date:2019-11-20
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Computational Analysis of Energy Landscapes Reveals Dynamic Features That Contribute to Binding of Inhibitors to CFTR-Associated Ligand.
J.Phys.Chem.B, 123, 2019
5HKB
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BU of 5hkb by Molmil
Crystal structure of the CFTR inhibitory factor Cif bound to the inhibitor KB2115
Descriptor: ACETATE ION, CFTR Inhibitory Factor (Cif), KB2115
Authors:Hvorecny, K.L, Madden, D.R.
Deposit date:2016-01-13
Release date:2016-05-18
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Rational Design of Potent and Selective Inhibitors of an Epoxide Hydrolase Virulence Factor from Pseudomonas aeruginosa.
J.Med.Chem., 59, 2016
5HKA
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BU of 5hka by Molmil
Crystal structure of the CFTR inhibitory factor Cif bound to an amide inhibitor
Descriptor: 5'-[2,6-dichloro-4-(propanoylamino)phenoxy]-2'-hydroxybiphenyl-4-carboxamide, CFTR inhibitory factor
Authors:Hvorecny, K.L, Madden, D.R.
Deposit date:2016-01-13
Release date:2016-05-18
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Rational Design of Potent and Selective Inhibitors of an Epoxide Hydrolase Virulence Factor from Pseudomonas aeruginosa.
J.Med.Chem., 59, 2016
5HK9
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BU of 5hk9 by Molmil
Crystal structure of the CFTR inhibitory factor Cif bound to a urea inhibitor
Descriptor: CFTR inhibitory factor, N-(4-{[4'-(carbamoylamino)-6-hydroxybiphenyl-3-yl]oxy}-3,5-dichlorophenyl)propanamide
Authors:Hvorecny, K.L, Madden, D.R.
Deposit date:2016-01-13
Release date:2016-05-18
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Rational Design of Potent and Selective Inhibitors of an Epoxide Hydrolase Virulence Factor from Pseudomonas aeruginosa.
J.Med.Chem., 59, 2016
5IC3
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BU of 5ic3 by Molmil
CAL PDZ domain with peptide and inhibitor
Descriptor: 4-[methyl(nitroso)amino]benzene-1,2-diol, Golgi-associated PDZ and coiled-coil motif-containing protein, HPV18E6 Peptide
Authors:Zhao, Y, Madden, D.R.
Deposit date:2016-02-22
Release date:2017-08-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:CAL PDZ domain with peptide and inhibitor
To Be Published
5K4F
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BU of 5k4f by Molmil
CAL PDZ mutant C319A with a peptide
Descriptor: Golgi-associated PDZ and coiled-coil motif-containing protein, HPV18E6 peptide
Authors:Zhao, Y, Madden, D.R.
Deposit date:2016-05-20
Release date:2017-08-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:CAL PDZ domain mutant with a peptide
To Be Published
5JYC
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BU of 5jyc by Molmil
Crystal structure of the E153Q mutant of the CFTR inhibitory factor Cif containing the adducted 14,15-EET hydrolysis intermediate
Descriptor: (5~{Z},11~{Z},14~{R},15~{R})-14,15-bis(oxidanyl)icosa-5,8,11-trienoic acid, CFTR inhibitory factor
Authors:Hvorecny, K.L, Madden, D.R.
Deposit date:2016-05-13
Release date:2017-01-11
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Pseudomonas aeruginosa sabotages the generation of host proresolving lipid mediators.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017

222036

PDB entries from 2024-07-03

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