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PDB: 296 件
6UER
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BU of 6uer by Molmil
Crystal form 2: Structure of TBP bound to C-C mismatch at pH 7
分子名称: DNA (5'-D(*GP*CP*TP*AP*TP*AP*AP*AP*CP*GP*GP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*CP*CP*CP*TP*TP*TP*AP*TP*AP*GP*C)-3'), TATA-box-binding protein 1
著者Schumacher, M.A, Al-Hashimi, H.
登録日2019-09-22
公開日2020-09-02
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献DNA mismatches reveal conformational penalties in protein-DNA recognition.
Nature, 587, 2020
6UEQ
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BU of 6ueq by Molmil
Structure of TBP bound to C-C mismatch containing TATA site
分子名称: DNA (5'-D(*GP*CP*TP*AP*TP*AP*AP*AP*AP*CP*GP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*CP*CP*TP*TP*TP*TP*AP*TP*AP*GP*C)-3'), SULFATE ION, ...
著者Schumacher, M.A, Al-Hashimi, H.
登録日2019-09-22
公開日2020-09-02
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献DNA mismatches reveal conformational penalties in protein-DNA recognition.
Nature, 587, 2020
6P5R
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BU of 6p5r by Molmil
Structure of T. brucei MERS1-GDP complex
分子名称: GUANOSINE-5'-DIPHOSPHATE, Mitochondrial edited mRNA stability factor 1
著者Schumacher, M.A.
登録日2019-05-30
公開日2019-11-06
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Structures of MERS1, the 5' processing enzyme of mitochondrial mRNAs inTrypanosoma brucei.
Rna, 26, 2020
6NOP
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BU of 6nop by Molmil
Structure of Cyanothece McdA(D38A)-ATP complex
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Cobyrinic acid ac-diamide synthase, MAGNESIUM ION
著者Schumacher, M.A.
登録日2019-01-16
公開日2019-04-24
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structures of maintenance of carboxysome distribution Walker-box McdA and McdB adaptor homologs.
Nucleic Acids Res., 47, 2019
5TZF
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BU of 5tzf by Molmil
Structure of the BldD CTD(D116A)-(c-di-GMP)2 intermediate, form 1
分子名称: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), DNA-binding protein
著者Schumacher, M.A.
登録日2016-11-21
公開日2017-04-19
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The Streptomyces master regulator BldD binds c-di-GMP sequentially to create a functional BldD2-(c-di-GMP)4 complex.
Nucleic Acids Res., 45, 2017
1UPF
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BU of 1upf by Molmil
STRUCTURE OF THE URACIL PHOSPHORIBOSYLTRANSFERASE, MUTANT C128V BOUND TO THE DRUG 5-FLUOROURACIL
分子名称: 5-FLUOROURACIL, SULFATE ION, URACIL PHOSPHORIBOSYLTRANSFERASE
著者Schumacher, M.A, Carter, D, Scott, D, Roos, D, Ullman, B, Brennan, R.G.
登録日1998-06-17
公開日1999-06-22
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structures of Toxoplasma gondii uracil phosphoribosyltransferase reveal the atomic basis of pyrimidine discrimination and prodrug binding.
EMBO J., 17, 1998
5KBJ
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BU of 5kbj by Molmil
Structure of Rep-DNA complex
分子名称: DNA (32-MER), Replication initiator A, N-terminal
著者Schumacher, M.
登録日2016-06-03
公開日2016-06-29
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.09 Å)
主引用文献Mechanism of staphylococcal multiresistance plasmid replication origin assembly by the RepA protein.
Proc. Natl. Acad. Sci. U.S.A., 111, 2014
4RS7
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BU of 4rs7 by Molmil
Structure of pNOB8 ParB-C
分子名称: ParB-C
著者Schumacher, M.A, Lee, J, Chinnam, N.B, Barilla, D.
登録日2014-11-07
公開日2015-09-16
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structures of archaeal DNA segregation machinery reveal bacterial and eukaryotic linkages.
Science, 349, 2015
4RS8
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BU of 4rs8 by Molmil
Apo structure of novel pNOB8 plasmid centromere binding protein
分子名称: AspA
著者Schumacher, M.A, Lee, J, Chinnam, N.B, Barilla, D.
登録日2014-11-07
公開日2015-09-16
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献Structures of archaeal DNA segregation machinery reveal bacterial and eukaryotic linkages.
Science, 349, 2015
6NJQ
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BU of 6njq by Molmil
Structure of TBP-Hoogsteen containing DNA complex
分子名称: DNA (5'-D(*GP*CP*TP*AP*TP*AP*AP*AP*CP*GP*GP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*CP*CP*GP*TP*TP*TP*AP*TP*AP*GP*C)-3'), TATA-box-binding protein 1
著者Schumacher, M.A, Stelling, A.
登録日2019-01-04
公開日2019-10-30
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Infrared Spectroscopic Observation of a G-C+Hoogsteen Base Pair in the DNA:TATA-Box Binding Protein Complex Under Solution Conditions.
Angew.Chem.Int.Ed.Engl., 58, 2019
6NON
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BU of 6non by Molmil
Structure of Cyanthece apo McdA
分子名称: ADENOSINE-5'-DIPHOSPHATE, Cobyrinic acid ac-diamide synthase, MAGNESIUM ION
著者Schumacher, M.A.
登録日2019-01-16
公開日2019-04-24
最終更新日2019-06-26
実験手法X-RAY DIFFRACTION (2.68 Å)
主引用文献Structures of maintenance of carboxysome distribution Walker-box McdA and McdB adaptor homologs.
Nucleic Acids Res., 47, 2019
7RMW
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BU of 7rmw by Molmil
Crystal structure of B. subtilis PurR bound to ppGpp
分子名称: GUANOSINE-5',3'-TETRAPHOSPHATE, Pur operon repressor
著者Schumacher, M.A.
登録日2021-07-28
公開日2021-12-22
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献The nucleotide messenger (p)ppGpp is an anti-inducer of the purine synthesis transcription regulator PurR in Bacillus.
Nucleic Acids Res., 50, 2022
6U9X
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BU of 6u9x by Molmil
Structure of T. brucei MERS1-RNA complex
分子名称: Mitochondrial edited mRNA stability factor 1, RNA (5'-R(*GP*AP*GP*AP*GP*GP*GP*GP*GP*UP*U)-3')
著者Schumacher, M.A.
登録日2019-09-09
公開日2019-11-06
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structures of MERS1, the 5' processing enzyme of mitochondrial mRNAs inTrypanosoma brucei.
Rna, 26, 2020
6DXO
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BU of 6dxo by Molmil
1.8 A structure of RsbN-BldN complex.
分子名称: BldN, RNA polymerase ECF-subfamily sigma factor
著者Schumacher, M.A.
登録日2018-06-29
公開日2018-07-11
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The crystal structure of the RsbN-sigma BldN complex from Streptomyces venezuelae defines a new structural class of anti-sigma factor.
Nucleic Acids Res., 46, 2018
1UPU
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BU of 1upu by Molmil
STRUCTURE OF THE URACIL PHOSPHORIBOSYLTRANSFERASE, MUTANT C128V, BOUND TO PRODUCT URIDINE-1-MONOPHOSPHATE (UMP)
分子名称: PHOSPHATE ION, URACIL PHOSPHORIBOSYLTRANSFERASE, URIDINE-5'-MONOPHOSPHATE
著者Schumacher, M.A, Carter, D, Scott, D, Roos, D, Ullman, B, Brennan, R.G.
登録日1998-04-16
公開日1999-05-11
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structures of Toxoplasma gondii uracil phosphoribosyltransferase reveal the atomic basis of pyrimidine discrimination and prodrug binding.
EMBO J., 17, 1998
5K58
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BU of 5k58 by Molmil
Structure of the K. pneumonia SlmA-DNA complex bound to the C-terminal of the cell division protein FtsZ
分子名称: DNA (5'-D(*GP*TP*GP*AP*GP*TP*AP*CP*TP*CP*AP*C)-3'), Nucleoid occlusion factor SlmA, Octapeptide
著者Schumacher, M.
登録日2016-05-23
公開日2016-06-22
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.772 Å)
主引用文献Structures of the nucleoid occlusion protein SlmA bound to DNA and the C-terminal domain of the cytoskeletal protein FtsZ.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
5K5R
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BU of 5k5r by Molmil
AspA-32mer DNA,crystal form 2
分子名称: AspA, DNA (32-MER), PHOSPHATE ION
著者Schumacher, M.
登録日2016-05-23
公開日2016-06-15
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.09 Å)
主引用文献Structures of archaeal DNA segregation machinery reveal bacterial and eukaryotic linkages.
Science, 349, 2015
5K98
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BU of 5k98 by Molmil
Structure of HipA-HipB-O2-O3 complex
分子名称: Antitoxin HipB, DNA (5'-D(*CP*TP*AP*TP*CP*CP*CP*CP*TP*TP*AP*AP*GP*GP*GP*GP*AP*TP*AP*GP*GP*GP*A)-3'), DNA (5'-D(*TP*CP*CP*CP*TP*AP*TP*CP*CP*CP*CP*TP*TP*AP*AP*GP*GP*GP*GP*AP*TP*AP*G)-3'), ...
著者Schumacher, M.
登録日2016-05-31
公開日2016-06-22
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.99 Å)
主引用文献HipBA-promoter structures reveal the basis of heritable multidrug tolerance.
Nature, 524, 2015
6BZD
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BU of 6bzd by Molmil
Structure of 14-3-3 gamma R57E mutant bound to GlcNAcylated peptide
分子名称: 14-3-3 protein gamma, 2-acetamido-2-deoxy-beta-D-glucopyranose, GlcNAcylated peptide
著者Schumacher, M.A.
登録日2017-12-22
公開日2018-05-09
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.67 Å)
主引用文献Structural basis of O-GlcNAc recognition by mammalian 14-3-3 proteins.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
7U3D
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BU of 7u3d by Molmil
Structure of S. venezuelae GlgX-c-di-GMP-acarbose complex (4.6)
分子名称: 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), Glycogen debranching enzyme GlgX
著者Schumacher, M.A.
登録日2022-02-27
公開日2022-10-05
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Allosteric regulation of glycogen breakdown by the second messenger cyclic di-GMP.
Nat Commun, 13, 2022
7U3B
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BU of 7u3b by Molmil
Structure of S. venezuelae GlgX bound to c-di-GMP and acarbose (pH 8.5)
分子名称: 4-O-(4,6-dideoxy-4-{[(1S,2S,3S,4R,5S)-2,3,4-trihydroxy-5-(hydroxymethyl)cyclohexyl]amino}-alpha-D-glucopyranosyl)-beta-D-glucopyranose, 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), Glycogen debranching enzyme GlgX, ...
著者Schumacher, M.A, Tschowri, N.
登録日2022-02-26
公開日2022-10-05
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Allosteric regulation of glycogen breakdown by the second messenger cyclic di-GMP.
Nat Commun, 13, 2022
7U39
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BU of 7u39 by Molmil
Structure of the apo form of Streptomyces venezuelae GlgX, the glycogen debranching enzyme
分子名称: Glycogen debranching enzyme GlgX
著者Schumacher, M.A.
登録日2022-02-26
公開日2022-10-05
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.51 Å)
主引用文献Allosteric regulation of glycogen breakdown by the second messenger cyclic di-GMP.
Nat Commun, 13, 2022
8TFK
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BU of 8tfk by Molmil
Cryo-EM structure of the Methanosarcina mazei glutamine synthetase (GS) with Met-Sox-P and ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, Glutamine synthetase, L-METHIONINE-S-SULFOXIMINE PHOSPHATE, ...
著者Schumacher, M.A.
登録日2023-07-11
公開日2023-11-15
最終更新日2023-11-29
実験手法ELECTRON MICROSCOPY (2.66 Å)
主引用文献M. mazei glutamine synthetase and glutamine synthetase-GlnK1 structures reveal enzyme regulation by oligomer modulation.
Nat Commun, 14, 2023
8TFB
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BU of 8tfb by Molmil
Cryo-EM structure of the Methanosarcina mazei apo glutamin synthetase structure: dodecameric form
分子名称: Glutamine synthetase, MAGNESIUM ION
著者Schumacher, M.A.
登録日2023-07-09
公開日2023-11-15
最終更新日2023-11-29
実験手法ELECTRON MICROSCOPY (2.99 Å)
主引用文献M. mazei glutamine synthetase and glutamine synthetase-GlnK1 structures reveal enzyme regulation by oligomer modulation.
Nat Commun, 14, 2023
8TGE
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BU of 8tge by Molmil
Crystal structure of the Methanosarcina mazei glutamine synthetase in complex with GlnK1
分子名称: Glutamine synthetase, Nitrogen regulatory protein GlnK1
著者Schumacher, M.A.
登録日2023-07-12
公開日2023-11-15
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献M. mazei glutamine synthetase and glutamine synthetase-GlnK1 structures reveal enzyme regulation by oligomer modulation.
Nat Commun, 14, 2023

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件を2024-08-28に公開中

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