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PDB: 80 results

9HAJ
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BU of 9haj by Molmil
Structure of compound 1 bound to SARS-CoV-2 main protease
Descriptor: (5~{R})-4-[(4-bromanyl-2-ethyl-phenyl)methyl]-1-(5-chloranylpyridin-3-yl)carbonyl-~{N}-ethyl-1,4-diazepane-5-carboxamide, 3C-like proteinase nsp5, CHLORIDE ION, ...
Authors:Mac Sweeney, A, Hazemann, J.
Deposit date:2024-11-04
Release date:2025-03-05
Method:X-RAY DIFFRACTION (1.276 Å)
Cite:Accelerating the hit-to-lead optimization of a SARS-CoV-2 Mpro inhibitor series by combining high throughput medicinal chemistry and computational simulations
To Be Published
5NAR
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BU of 5nar by Molmil
Complement factor D in complex with the inhibitor (S)-pyrrolidine-1,2-dicarboxylic acid 1-[(1-carbamoyl-1H-indol-3-yl)-amide] 2-[(3-trifluoromethoxy-phenyl)-amide]
Descriptor: (2~{S})-~{N}1-(1-aminocarbonylindol-3-yl)-~{N}2-[3-(trifluoromethyloxy)phenyl]pyrrolidine-1,2-dicarboxamide, Complement factor D, SULFATE ION
Authors:Mac Sweeney, A, Ostermann, N.
Deposit date:2017-02-28
Release date:2017-06-28
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Discovery of Highly Potent and Selective Small-Molecule Reversible Factor D Inhibitors Demonstrating Alternative Complement Pathway Inhibition in Vivo.
J. Med. Chem., 60, 2017
5NAW
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BU of 5naw by Molmil
Complement factor D in complex with the inhibitor (1R,3S,5R)-2-Aza-bicyclo[3.1.0]hexane-2,3-dicarboxylic acid 2-[(1-carbamoyl-1H-indol-3-yl)-amide] 3-[(3-trifluoromethoxy-phenyl)-amide]
Descriptor: (1~{R},3~{S},5~{R})-~{N}2-(1-aminocarbonylindol-3-yl)-~{N}3-[3-(trifluoromethyloxy)phenyl]-2-azabicyclo[3.1.0]hexane-2,3-dicarboxamide, Complement factor D
Authors:Mac Sweeney, A, Ostermann, N.
Deposit date:2017-02-28
Release date:2017-06-28
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Discovery of Highly Potent and Selective Small-Molecule Reversible Factor D Inhibitors Demonstrating Alternative Complement Pathway Inhibition in Vivo.
J. Med. Chem., 60, 2017
5NBA
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BU of 5nba by Molmil
Complement factor D in complex with the inhibitor (2S,4R)-4-Fluoro-pyrrolidine-1,2-dicarboxylic acid 1-[(1-carbamoyl-1H-indol-3-yl)-amide] 2-[(3-trifluoromethoxy-phenyl)-amide]
Descriptor: (2~{S},4~{R})-~{N}1-(1-aminocarbonylindol-3-yl)-4-fluoranyl-~{N}2-[3-(trifluoromethyloxy)phenyl]pyrrolidine-1,2-dicarboxamide, Complement factor D
Authors:Mac Sweeney, A, Ostermann, N.
Deposit date:2017-03-01
Release date:2017-06-28
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Discovery of Highly Potent and Selective Small-Molecule Reversible Factor D Inhibitors Demonstrating Alternative Complement Pathway Inhibition in Vivo.
J. Med. Chem., 60, 2017
5NB6
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BU of 5nb6 by Molmil
Complement factor D in complex with the inhibitor (2S,4S)-4-Amino-pyrrolidine-1,2-dicarboxylic acid 1-[(1-carbamoyl-1H-indol-3-yl)-amide] 2-[(3-trifluoromethoxy-phenyl)-amide]
Descriptor: (2~{S},4~{S})-~{N}1-(1-aminocarbonylindol-3-yl)-4-azanyl-~{N}2-[3-(trifluoromethyloxy)phenyl]pyrrolidine-1,2-dicarboxamide, Complement factor D
Authors:Mac Sweeney, A, Ostermann, N.
Deposit date:2017-03-01
Release date:2017-06-28
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Discovery of Highly Potent and Selective Small-Molecule Reversible Factor D Inhibitors Demonstrating Alternative Complement Pathway Inhibition in Vivo.
J. Med. Chem., 60, 2017
9HAK
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BU of 9hak by Molmil
Structure of compound 119 bound to SARS-CoV-2 main protease
Descriptor: (5~{R})-4-[(4-bromanyl-2-ethyl-phenyl)methyl]-~{N}-ethyl-1-thieno[2,3-c]pyridin-4-ylcarbonyl-1,4-diazepane-5-carboxamide, 3C-like proteinase nsp5, CHLORIDE ION, ...
Authors:Mac Sweeney, A, Hazemann, J.
Deposit date:2024-11-04
Release date:2024-12-04
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Accelerating the hit-to-lead optimization of a SARS-CoV-2 Mpro inhibitor series by combining high throughput medicinal chemistry and computational simulations
To Be Published
9HJH
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BU of 9hjh by Molmil
Structure of compound 1 bound to SARS-CoV-2 main protease
Descriptor: (2~{R})-4-[(4-bromanyl-2-ethyl-phenyl)methyl]-1-(5-chloranylpyridin-3-yl)carbonyl-~{N}-ethyl-1,4-diazepane-2-carboxamide, 1,2-ETHANEDIOL, 3C-like proteinase nsp5, ...
Authors:Mac Sweeney, A, Hazemann, J.
Deposit date:2024-11-29
Release date:2024-12-11
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Accelerating the hit-to-lead optimization of a SARS-CoV-2 Mpro inhibitor series by combining high throughput medicinal chemistry and computational simulations
To Be Published
9FDB
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BU of 9fdb by Molmil
Co-crystal structure of Galectin-3 with an inhibitor
Descriptor: (2~{R},3~{R},4~{S},5~{R},6~{R})-~{N}-cyclopropyl-~{N}-(2-hydroxyethyl)-6-(hydroxymethyl)-3,5-bis(oxidanyl)-4-[4-[3,4,5-tris(fluoranyl)phenyl]-1,2,3-triazol-1-yl]oxane-2-carboxamide, Galectin-3, THIOCYANATE ION
Authors:Mac Sweeney, A.
Deposit date:2024-05-16
Release date:2025-03-26
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Discovery of Galactopyranose-1-Carboxamides as a New Class of Small, Novel, Potent, Selective, and Orally Active Galectin-3 Inhibitors.
Chemmedchem, 2025
9FDC
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BU of 9fdc by Molmil
Co-crystal structure of Galectin-3 with an inhibitor
Descriptor: (2~{R},3~{R},4~{S},5~{R},6~{R})-~{N}-[3,5-bis(chloranyl)phenyl]-6-(hydroxymethyl)-~{N}-methyl-3,5-bis(oxidanyl)-4-[4-[3,4,5-tris(fluoranyl)phenyl]-1,2,3-triazol-1-yl]oxane-2-carboxamide, Galectin-3, NONAETHYLENE GLYCOL, ...
Authors:Mac Sweeney, A.
Deposit date:2024-05-16
Release date:2025-03-26
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Discovery of Galactopyranose-1-Carboxamides as a New Class of Small, Novel, Potent, Selective, and Orally Active Galectin-3 Inhibitors.
Chemmedchem, 2025
5FCR
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BU of 5fcr by Molmil
MOUSE COMPLEMENT FACTOR D
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Complement factor D, DIMETHYL SULFOXIDE, ...
Authors:Mac Sweeney, A.
Deposit date:2015-12-15
Release date:2016-10-26
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Small-molecule factor D inhibitors targeting the alternative complement pathway.
Nat.Chem.Biol., 12, 2016
5FCK
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BU of 5fck by Molmil
COMPLEMENT FACTOR D IN COMPLEX WITH COMPOUND 5
Descriptor: 1-[2-[(1~{R},3~{S},5~{R})-3-[[(1~{R})-1-(3-chloranyl-2-fluoranyl-phenyl)ethyl]carbamoyl]-2-azabicyclo[3.1.0]hexan-2-yl]-2-oxidanylidene-ethyl]pyrazolo[3,4-c]pyridine-3-carboxamide, Complement factor D, SULFATE ION
Authors:Mac Sweeney, A.
Deposit date:2015-12-15
Release date:2016-10-26
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Small-molecule factor D inhibitors targeting the alternative complement pathway.
Nat.Chem.Biol., 12, 2016
8RMT
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BU of 8rmt by Molmil
Galectin-3 with a bound inhibitor
Descriptor: (2~{R},3~{R},4~{S},5~{R},6~{R})-~{N}-[3,5-bis(chloranyl)phenyl]-6-(hydroxymethyl)-3-methoxy-5-oxidanyl-~{N}-[(1~{S},2~{S})-2-oxidanylcyclohexyl]-4-[4-[3,4,5-tris(fluoranyl)phenyl]-1,2,3-triazol-1-yl]oxane-2-carboxamide, Galectin-3, THIOCYANATE ION
Authors:Mac Sweeney, A, Sager, C.
Deposit date:2024-01-08
Release date:2025-01-29
Last modified:2025-03-26
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Discovery of Galactopyranose-1-Carboxamides as a New Class of Small, Novel, Potent, Selective, and Orally Active Galectin-3 Inhibitors.
Chemmedchem, 2025
8RMV
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BU of 8rmv by Molmil
Galectin-3 with a bound inhibitor
Descriptor: (2~{R},3~{R},4~{S},5~{R},6~{R})-~{N}-[3,5-bis(chloranyl)phenyl]-6-(hydroxymethyl)-3-methoxy-5-oxidanyl-~{N}-[(1~{S},2~{S})-2-oxidanylcyclobutyl]-4-[4-[3,4,5-tris(fluoranyl)phenyl]-1,2,3-triazol-1-yl]oxane-2-carboxamide, Galectin-3, THIOCYANATE ION
Authors:Mac Sweeney, A, Sager, C.
Deposit date:2024-01-08
Release date:2025-01-29
Last modified:2025-03-26
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Discovery of Galactopyranose-1-Carboxamides as a New Class of Small, Novel, Potent, Selective, and Orally Active Galectin-3 Inhibitors.
Chemmedchem, 2025
8RMU
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BU of 8rmu by Molmil
Galectin-3 with a bound inhibitor
Descriptor: (2~{R},3~{R},4~{S},5~{R},6~{R})-~{N}-[3,5-bis(chloranyl)phenyl]-6-(hydroxymethyl)-3-methoxy-5-oxidanyl-~{N}-[(1~{S},2~{S})-2-oxidanylcyclopentyl]-4-[4-[3,4,5-tris(fluoranyl)phenyl]-1,2,3-triazol-1-yl]oxane-2-carboxamide, Galectin-3, THIOCYANATE ION
Authors:Mac Sweeney, A, Sager, C.
Deposit date:2024-01-08
Release date:2025-01-29
Last modified:2025-03-26
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Discovery of Galactopyranose-1-Carboxamides as a New Class of Small, Novel, Potent, Selective, and Orally Active Galectin-3 Inhibitors.
Chemmedchem, 2025
8RRC
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BU of 8rrc by Molmil
Galectin-3 with a small molecule inhibitor
Descriptor: (2~{R},3~{R},4~{S},5~{R},6~{R})-4-[4-[4-chloranyl-2,3-bis(fluoranyl)phenyl]-1,2,3-triazol-1-yl]-2-(hydroxymethyl)-5-methoxy-6-[[3-(3-methyloxetan-3-yl)-1,2-oxazol-5-yl]methyl]oxan-3-ol, Galectin-3, THIOCYANATE ION
Authors:Mac Sweeney, A, Sager, C.
Deposit date:2024-01-22
Release date:2025-01-29
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Galectin-3 with a small molecule inhibitor
To Be Published
8RRB
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BU of 8rrb by Molmil
Galectin-3 with a small molecule inhibitor
Descriptor: Galectin-3, NONAETHYLENE GLYCOL, THIOCYANATE ION, ...
Authors:Mac Sweeney, A, Sager, C.
Deposit date:2024-01-22
Release date:2025-01-29
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Galectin-3 with a small molecule inhibitor
To Be Published
8RR7
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BU of 8rr7 by Molmil
Galectin-3 with a small molecule inhibitor
Descriptor: (2~{R},3~{R},4~{S},5~{R},6~{R})-4-[4-[4-chloranyl-2,3-bis(fluoranyl)phenyl]-1,2,3-triazol-1-yl]-6-[[1-[(3~{R},4~{R})-3-fluoranyloxan-4-yl]-1,2,3-triazol-4-yl]methyl]-2-(hydroxymethyl)-5-methoxy-oxan-3-ol, CHLORIDE ION, Galectin-3, ...
Authors:Mac Sweeney, A, Sager, C.
Deposit date:2024-01-22
Release date:2025-01-29
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Galectin-3 with a small molecule inhibitor
To Be Published
8RR8
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BU of 8rr8 by Molmil
Galectin-3 with a small molecule inhibitor
Descriptor: (2~{R},3~{R},4~{S},5~{R},6~{R})-4-[4-[4-chloranyl-2,3-bis(fluoranyl)phenyl]-1,2,3-triazol-1-yl]-6-[[1-[(3~{R},4~{R})-4-fluoranyloxolan-3-yl]-1,2,3-triazol-4-yl]methyl]-2-(hydroxymethyl)-5-methoxy-oxan-3-ol, Galectin-3
Authors:Mac Sweeney, A, Sager, C.
Deposit date:2024-01-22
Release date:2025-01-29
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Galectin-3 with a small molecule inhibitor
To Be Published
8RRE
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BU of 8rre by Molmil
Galectin-3 with a small molecule inhibitor
Descriptor: (2~{R},3~{R},4~{S},5~{R},6~{R})-4-[4-[4-chloranyl-2,3-bis(fluoranyl)phenyl]-1,2,3-triazol-1-yl]-2-(hydroxymethyl)-5-methoxy-6-[[1-(3-methyloxetan-3-yl)-1,2,3-triazol-4-yl]methyl]oxan-3-ol, Galectin-3, THIOCYANATE ION
Authors:Mac Sweeney, A, Sager, C.
Deposit date:2024-01-22
Release date:2025-01-29
Method:X-RAY DIFFRACTION (1.208 Å)
Cite:Galectin-3 with a small molecule inhibitor
To Be Published
8RRG
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BU of 8rrg by Molmil
Galectin-3 with a small molecule inhibitor
Descriptor: (2~{R},3~{R},4~{S},5~{R},6~{R})-6-[[1-[3-[bis(fluoranyl)methyl]oxetan-3-yl]-1,2,3-triazol-4-yl]methyl]-4-[4-[4-chloranyl-2,3-bis(fluoranyl)phenyl]-1,2,3-triazol-1-yl]-2-(hydroxymethyl)-5-methoxy-oxan-3-ol, CHLORIDE ION, Galectin-3, ...
Authors:Mac Sweeney, A, Sager, C.
Deposit date:2024-01-22
Release date:2025-01-29
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Galectin-3 with a small molecule inhibitor
To Be Published
8RRF
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BU of 8rrf by Molmil
Galectin-3 with a small molecule inhibitor
Descriptor: (2~{R},3~{R},4~{S},5~{R},6~{R})-4-[4-[4-chloranyl-2,3-bis(fluoranyl)phenyl]-1,2,3-triazol-1-yl]-6-[[1-[3-(fluoranylmethyl)oxetan-3-yl]-1,2,3-triazol-4-yl]methyl]-2-(hydroxymethyl)-5-methoxy-oxan-3-ol, CHLORIDE ION, Galectin-3, ...
Authors:Mac Sweeney, A, Sager, C.
Deposit date:2024-01-22
Release date:2025-01-29
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Galectin-3 with a small molecule inhibitor
To Be Published
8RRA
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BU of 8rra by Molmil
Galectin-3 with a small molecule inhibitor
Descriptor: (2~{R},3~{R},4~{S},5~{R},6~{R})-4-[4-[4-chloranyl-2,3-bis(fluoranyl)phenyl]-1,2,3-triazol-1-yl]-6-[[1-[(3~{R},4~{S})-3-fluoranyloxan-4-yl]-1,2,3-triazol-4-yl]methyl]-2-(hydroxymethyl)-5-methoxy-oxan-3-ol, Galectin-3, THIOCYANATE ION
Authors:Mac Sweeney, A, Sager, C.
Deposit date:2024-01-22
Release date:2025-01-29
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Galectin-3 with a small molecule inhibitor
To Be Published
8RR9
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BU of 8rr9 by Molmil
Galectin-3 with a small molecule inhibitor
Descriptor: (2~{R},3~{R},4~{S},5~{R},6~{R})-4-[4-[4-chloranyl-2,3-bis(fluoranyl)phenyl]-1,2,3-triazol-1-yl]-6-[[1-[(3~{S},4~{S})-4-fluoranyloxolan-3-yl]-1,2,3-triazol-4-yl]methyl]-2-(hydroxymethyl)-5-methoxy-oxan-3-ol, Galectin-3, THIOCYANATE ION
Authors:Mac Sweeney, A, Sager, C.
Deposit date:2024-01-22
Release date:2025-01-29
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Galectin-3 with a small molecule inhibitor
To Be Published
8S67
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BU of 8s67 by Molmil
Galectin-3 with a small molecule inhibitor
Descriptor: (2~{R},3~{R},4~{S},5~{R},6~{R})-6-[(1-~{tert}-butyl-1,2,3-triazol-4-yl)methyl]-2-(hydroxymethyl)-5-methoxy-4-[4-[3,4,5-tris(fluoranyl)phenyl]-1,2,3-triazol-1-yl]oxan-3-ol, Galectin-3, THIOCYANATE ION
Authors:Mac Sweeney, A, Sager, C.
Deposit date:2024-02-26
Release date:2025-03-12
Method:X-RAY DIFFRACTION (1.097 Å)
Cite:Galectin-3 with a small molecule inhibitor
To Be Published
6FUH
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BU of 6fuh by Molmil
Complement factor D in complex with the inhibitor (4-((3-(aminomethyl)phenyl)amino)quinazolin-2-yl)-L-valine
Descriptor: (2~{S})-2-[[4-[[3-(aminomethyl)phenyl]amino]quinazolin-2-yl]amino]-3-methyl-butanoic acid, Complement factor D
Authors:Mac Sweeney, A, Ostermann, N, Vulpetti, A, Maibaum, J, Erbel, P, Lorthiois, E, Yoon, T, Randl, S, Ruedisser, S.
Deposit date:2018-02-27
Release date:2018-06-06
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Discovery and Design of First Benzylamine-Based Ligands Binding to an Unlocked Conformation of the Complement Factor D.
ACS Med Chem Lett, 9, 2018

 

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