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PDB: 52230 results

2AZ3
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Structure of a halophilic nucleoside diphosphate kinase from Halobacterium salinarum in complex with CDP
Descriptor: CYTIDINE-5'-DIPHOSPHATE, MAGNESIUM ION, Nucleoside diphosphate kinase
Authors:Besir, H, Zeth, K, Bracher, A, Heider, U, Ishibashi, M, Tokunaga, M, Oesterhelt, D.
Deposit date:2005-09-09
Release date:2005-12-20
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of a halophilic nucleoside diphosphate kinase from Halobacterium salinarum
Febs Lett., 579, 2005
2WGH
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Human Ribonucleotide reductase R1 subunit (RRM1) in complex with dATP and Mg.
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, GLYCEROL, MAGNESIUM ION, ...
Authors:Welin, R.M, Moche, M, Arrowsmith, C.H, Berglund, H, Bountra, C, Collins, R, Edwards, A.M, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Johansson, A, Johansson, I, Karlberg, T, Kragh-Nielsen, T, Kotzsch, A, Kotenyova, T, Nyman, T, Persson, C, Sagemark, J, Schueler, H, Schutz, P, Siponen, M.I, Svensson, L, Thorsell, A.G, Tresaugues, L, Van Den Berg, S, Weigelt, J, Wisniewska, M, Nordlund, P.
Deposit date:2009-04-19
Release date:2009-05-05
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural Basis for Allosteric Regulation of Human Ribonucleotide Reductase by Nucleotide-Induced Oligomerization.
Nat.Struct.Mol.Biol., 18, 2011
2KAZ
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Folding topology of a bimolecular DNA quadruplex containing a stable mini-hairpin motif within the connecting loop
Descriptor: 5'-D(*DGP*DGP*DGP*DAP*DCP*DGP*DTP*DAP*DGP*DTP*DGP*DGP*DG)-3', POTASSIUM ION
Authors:Balkwill, G.D, Garner, T.P, Williams, H.E.L, Searle, M.S.
Deposit date:2008-11-18
Release date:2008-12-16
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Folding topology of a bimolecular DNA quadruplex containing a stable mini-hairpin motif within the diagonal loop
J.Mol.Biol., 385, 2009
3ETF
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Crystal structure of a putative succinate-semialdehyde dehydrogenase from salmonella typhimurium lt2
Descriptor: Putative succinate-semialdehyde dehydrogenase
Authors:Brunzelle, J.S, Evdokimova, E, Kudritska, M, Wawrzak, Z, Anderson, W.F, Savchenk, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2008-10-07
Release date:2008-11-04
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure and activity of the NAD(P)(+) -dependent succinate semialdehyde dehydrogenase YneI from Salmonella typhimurium.
Proteins, 81, 2013
1RS7
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Rat neuronal NOS heme domain with D-phenylalanine-D-nitroarginine amide bound
Descriptor: 5,6,7,8-TETRAHYDROBIOPTERIN, ACETATE ION, D-MANNITOL, ...
Authors:Flinspach, M, Li, H, Jamal, J, Yang, W, Huang, H, Silverman, R.B, Poulos, T.L.
Deposit date:2003-12-09
Release date:2004-05-18
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structures of the Neuronal and Endothelial Nitric Oxide Synthase Heme Domain with d-Nitroarginine-Containing Dipeptide Inhibitors Bound.
Biochemistry, 43, 2004
1JNF
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Rabbit serum transferrin at 2.6 A resolution.
Descriptor: CARBONATE ION, CHLORIDE ION, FE (III) ION, ...
Authors:Hall, D.R, Hadden, J.M, Leonard, G.A, Bailey, S, Neu, M, Winn, M, Lindley, P.F.
Deposit date:2001-07-24
Release date:2001-08-01
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The crystal and molecular structures of diferric porcine and rabbit serum transferrins at resolutions of 2.15 and 2.60 A, respectively.
Acta Crystallogr.,Sect.D, 58, 2002
1JP5
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Crystal structure of the single-chain Fv fragment 1696 in complex with the epitope peptide corresponding to N-terminus of HIV-1 protease
Descriptor: epitope peptide corresponding to N-terminus of HIV-1 protease, single-chain Fv fragment 1696
Authors:Rezacova, P, Lescar, J, Brynda, J, Fabry, M, Horejsi, M, Sedlacek, J, Bentley, G.A.
Deposit date:2001-08-01
Release date:2001-10-12
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural basis of HIV-1 and HIV-2 protease inhibition by a monoclonal antibody.
Structure, 9, 2001
2KI5
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HERPES SIMPLEX TYPE-1 THYMIDINE KINASE IN COMPLEX WITH THE DRUG ACICLOVIR AT 1.9A RESOLUTION
Descriptor: 9-HYROXYETHOXYMETHYLGUANINE, PROTEIN (THYMIDINE KINASE), SULFATE ION
Authors:Bennett, M.S, Wien, F, Champness, J.N, Batuwangala, T, Rutherford, T, Summers, W.C, Sun, H, Wright, G, Sanderson, M.R.
Deposit date:1999-02-12
Release date:1999-03-04
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure to 1.9 A resolution of a complex with herpes simplex virus type-1 thymidine kinase of a novel, non-substrate inhibitor: X-ray crystallographic comparison with binding of aciclovir.
FEBS Lett., 443, 1999
4Q4Q
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tRNA-Guanine Transglycosylase (TGT) in Complex with 2-[(Thiophen-2-ylmethyl)amino]-1H,7H,8H-imidazo[4,5-g]quinazolin-8-one
Descriptor: 2-[(thiophen-2-ylmethyl)amino]-1,7-dihydro-8H-imidazo[4,5-g]quinazolin-8-one, GLYCEROL, Queuine tRNA-ribosyltransferase, ...
Authors:Neeb, M, Heine, A, Klebe, G.
Deposit date:2014-04-15
Release date:2014-07-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.41 Å)
Cite:Beyond Affinity: Enthalpy-Entropy Factorization Unravels Complexity of a Flat Structure-Activity Relationship for Inhibition of a tRNA-Modifying Enzyme.
J.Med.Chem., 57, 2014
1ROE
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NMR STUDY OF 2FE-2S FERREDOXIN OF SYNECHOCOCCUS ELONGATUS
Descriptor: FE2/S2 (INORGANIC) CLUSTER, FERREDOXIN
Authors:Roesch, P, Baumann, B, Sticht, H, Sutter, M, Haehnel, W.
Deposit date:1995-11-24
Release date:1996-06-10
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structure of Synechococcus elongatus [Fe2S2] ferredoxin in solution.
Biochemistry, 35, 1996
1JS1
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Crystal Structure of a new transcarbamylase from the anaerobic bacterium Bacteroides fragilis at 2.0 A resolution
Descriptor: PHOSPHATE ION, Transcarbamylase
Authors:Shi, D, Gallegos, R, DePonte III, J, Morizono, H, Yu, X, Allewell, N.M, Malamy, M, Tuchman, M.
Deposit date:2001-08-15
Release date:2002-07-17
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of a transcarbamylase-like protein from the anaerobic bacterium Bacteroides fragilis at 2.0 A resolution.
J.Mol.Biol., 320, 2002
3E9V
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BU of 3e9v by Molmil
Crystal structure of human B-cell Translocation Gene 2 (BTG2)
Descriptor: 1,2-ETHANEDIOL, Protein BTG2
Authors:Sampathkumar, P, Romero, R, Wasserman, S, Hu, S, Maletic, M, Freeman, J, Tarun, G, Atwell, S, Sauder, J.M, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-08-23
Release date:2008-10-14
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of human B-cell Translocation Gene 2 (BTG2)
To be Published
1JXG
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The 1.6 A Resolution Crystal Structure of a Mutant Poplar Plastocyanin Bearing a 21-25 Engeneered Disulfide Bridge
Descriptor: COPPER (I) ION, PLASTOCYANIN A, SULFATE ION
Authors:Milani, M, Andolfi, L, Cannistraro, S, Verbeet, M.P, Bolognesi, M.
Deposit date:2001-09-07
Release date:2001-12-19
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The 1.6 A resolution crystal structure of a mutant plastocyanin bearing a 21-25 engineered disulfide bridge.
Acta Crystallogr.,Sect.D, 57, 2001
3EFV
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BU of 3efv by Molmil
Crystal Structure of a Putative Succinate-Semialdehyde Dehydrogenase from Salmonella typhimurium LT2 with bound NAD
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Putative succinate-semialdehyde dehydrogenase
Authors:Brunzelle, J.S, Evdokimova, E, Kudritska, M, Anderson, W.F, Savchenko, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2008-09-10
Release date:2008-11-04
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure and activity of the NAD(P)(+) -dependent succinate semialdehyde dehydrogenase YneI from Salmonella typhimurium.
Proteins, 81, 2013
1JDT
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CRYSTAL STRUCTURE OF 5'-DEOXY-5'-METHYLTHIOADENOSINE PHOSPHORYLASE COMPLEXED WITH MTA AND SULFATE ION
Descriptor: 5'-DEOXY-5'-METHYLTHIOADENOSINE, 5'-METHYLTHIOADENOSINE PHOSPHORYLASE, SULFATE ION
Authors:Appleby, T.C, Mathews, I.I, Porcelli, M, Cacciapuoti, G, Ealick, S.E.
Deposit date:2001-06-15
Release date:2001-10-26
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Three-dimensional structure of a hyperthermophilic 5'-deoxy-5'-methylthioadenosine phosphorylase from Sulfolobus solfataricus.
J.Biol.Chem., 276, 2001
1SSL
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BU of 1ssl by Molmil
Solution structure of the PSI domain from the Met receptor
Descriptor: Hepatocyte growth factor receptor
Authors:Kozlov, G, Perreault, A, Schrag, J.D, Cygler, M, Gehring, K, Ekiel, I.
Deposit date:2004-03-24
Release date:2004-10-12
Last modified:2024-10-30
Method:SOLUTION NMR
Cite:Insights into function of PSI domains from structure of the Met receptor PSI domain.
Biochem.Biophys.Res.Commun., 321, 2004
2A1B
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BU of 2a1b by Molmil
Carboxysome shell protein ccmK2
Descriptor: Carbon dioxide concentrating mechanism protein ccmK homolog 2
Authors:Kerfeld, C.A, Sawaya, M.R, Tanaka, S, Nguyen, C.V, Phillips, M, Beeby, M, Yeates, T.O.
Deposit date:2005-06-20
Release date:2005-08-09
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Protein structures forming the shell of primitive bacterial organelles
Science, 309, 2005
4QC7
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Dodecamer structure of 5-formylcytosine containing DNA
Descriptor: short DNA strands
Authors:Szulik, M.W, Pallan, P, Egli, M, Stone, M.P.
Deposit date:2014-05-09
Release date:2015-02-11
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Differential stabilities and sequence-dependent base pair opening dynamics of watson-crick base pairs with 5-hydroxymethylcytosine, 5-formylcytosine, or 5-carboxylcytosine.
Biochemistry, 54, 2015
1JDU
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BU of 1jdu by Molmil
CRYSTAL STRUCTURE OF 5'-DEOXY-5'-METHYLTHIOADENOSINE PHOSPHORYLASE
Descriptor: 5'-METHYLTHIOADENOSINE PHOSPHORYLASE
Authors:Appleby, T.C, Mathews, I.I, Porcelli, M, Cacciapuoti, G, Ealick, S.E.
Deposit date:2001-06-15
Release date:2001-10-26
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Three-dimensional structure of a hyperthermophilic 5'-deoxy-5'-methylthioadenosine phosphorylase from Sulfolobus solfataricus.
J.Biol.Chem., 276, 2001
4CSR
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BU of 4csr by Molmil
High resolution crystal structure of the histone fold dimer (NF-YB)-(NF-YC)
Descriptor: GLYCEROL, NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT BETA, NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT GAMMA
Authors:Gnesutta, N, Cocolo, S, Mantovani, R, Bolognesi, M, Nardini, M.
Deposit date:2014-03-09
Release date:2015-03-18
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:High Resolution Crystal Structure of the Histone Fold Dimer (NF-Yb)-(NF-Yc)
To be Published
2A91
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Crystal structure of ErbB2 domains 1-3
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Receptor tyrosine-protein kinase erbB-2
Authors:Garrett, T.P.J, McKern, N.M, Lou, M, Elleman, T.C, Adams, T.E, Lovrecz, G.O, Kofler, M, Jorissen, R.N, Nice, E.C, Burgess, A.W.
Deposit date:2005-07-11
Release date:2005-07-26
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The Crystal Structure of a Truncated ErbB2 Ectodomain Reveals an Active Conformation, Poised to Interact with Other ErbB Receptors
Mol.Cell, 11, 2003
2KTX
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COMPLETE KALIOTOXIN FROM ANDROCTONUS MAURETANICUS MAURETANICUS, NMR, 18 STRUCTURES
Descriptor: KALIOTOXIN
Authors:Gairi, M, Romi, R, Fernandez, I, Rochat, H, Martin-Eauclaire, M.-F, Van Rietschtoten, J, Pons, M, Giralt, E.
Deposit date:1997-02-27
Release date:1997-06-16
Last modified:2017-12-20
Method:SOLUTION NMR
Cite:3D structure of kaliotoxin: is residue 34 a key for channel selectivity?
J.Pept.Sci., 3, 1997
1JG9
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BU of 1jg9 by Molmil
Crystal Structure of Amylosucrase from Neisseria polysaccharea in Complex with D-glucose
Descriptor: Amylosucrase, alpha-D-glucopyranose
Authors:Mirza, O, Skov, L.K, Gajhede, M.
Deposit date:2001-06-23
Release date:2001-10-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Crystal structures of amylosucrase from Neisseria polysaccharea in complex with D-glucose and the active site mutant Glu328Gln in complex with the natural substrate sucrose.
Biochemistry, 40, 2001
2AC2
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Crystal structure of the Tyr13Phe mutant variant of Bacillus subtilis Ferrochelatase with Zn(2+) bound at the active site
Descriptor: Ferrochelatase, ZINC ION
Authors:Shipovskov, S, Karlberg, T, Fodje, M, Hansson, M.D, Ferreira, G.C, Hansson, M, Reimann, C.T, Al-Karadaghi, S.
Deposit date:2005-07-18
Release date:2005-09-20
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Metallation of the Transition-state Inhibitor N-methyl Mesoporphyrin by Ferrochelatase: Implications for the Catalytic Reaction Mechanism.
J.Mol.Biol., 352, 2005
1T3K
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NMR structure of a CDC25-like dual-specificity tyrosine phosphatase of Arabidopsis thaliana
Descriptor: Dual-specificity tyrosine phosphatase, ZINC ION
Authors:Landrieu, I, da Costa, M, De Veylder, L, Dewitte, F, Vandepoele, K, Hassan, S, Wieruszeski, J.M, Faure, J.D, Inze, D, Lippens, G.
Deposit date:2004-04-27
Release date:2004-09-07
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:A small CDC25 dual-specificity tyrosine-phosphatase isoform in Arabidopsis thaliana.
Proc.Natl.Acad.Sci.Usa, 101, 2004

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