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PDB: 52230 results

1IXP
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Enzyme-phosphate Complex of Pyridoxine 5'-Phosphate synthase
Descriptor: PHOSPHATE ION, Pyridoxine 5'-Phosphate synthase
Authors:Garrido-Franco, M, Laber, B, Huber, R, Clausen, T.
Deposit date:2002-06-28
Release date:2003-02-11
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Enzyme-ligand complexes of pyridoxine 5'-phosphate synthase: implications for substrate binding and catalysis
J.MOL.BIOL., 321, 2002
2CQ0
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solution structure of RNA binding domain in eukaryotic translation initiation factor 3 subunit 4
Descriptor: Eukaryotic translation initiation factor 3 subunit 4
Authors:Tsuda, K, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-05-19
Release date:2005-11-19
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:solution structure of RNA binding domain in eukaryotic translation initiation factor 3 subunit 4
To be Published
1IZC
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Crystal Structure Analysis of Macrophomate synthase
Descriptor: MAGNESIUM ION, PYRUVIC ACID, macrophomate synthase intermolecular Diels-Alderase
Authors:Ose, T, Watanabe, K, Mie, T, Honma, M, Watanabe, H, Yao, M, Oikawa, H, Tanaka, I.
Deposit date:2002-10-01
Release date:2003-04-01
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Insight into a natural Diels-Alder reaction from the structure of macrophomate synthase.
Nature, 422, 2003
1IV8
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Crystal Structure of Maltooligosyl trehalose synthase
Descriptor: MALTOOLIGOSYL TREHALOSE SYNTHASE
Authors:Kobayashi, M, Kubota, M, Matsuura, Y.
Deposit date:2002-03-15
Release date:2003-02-25
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Refined Structure and Functional Implications of Trehalose Synthase from Sulfolobus acidocaldarius
J.APPL.Glyosci., 50, 2003
1BUX
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BU of 1bux by Molmil
3'-PHOSPHORYLATED NUCLEOTIDES BINDING TO NUCLEOSIDE DIPHOSPHATE KINASE
Descriptor: 3'-PHOSPHATE-ADENOSINE-5'-PHOSPHATE SULFATE, NUCLEOSIDE DIPHOSPHATE KINASE
Authors:Xu, Y, Schneider, B, Deville-Bonne, D, Veron, M, Janin, J.
Deposit date:1998-09-07
Release date:1999-04-27
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:3'-Phosphorylated nucleotides are tight binding inhibitors of nucleoside diphosphate kinase activity.
J.Biol.Chem., 273, 1998
1PEW
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BU of 1pew by Molmil
High Resolution Crystal Structure of Jto2, a mutant of the non-amyloidogenic Lamba6 Light Chain, Jto
Descriptor: CADMIUM ION, Jto2, a LAMBDA-6 TYPE IMMUNOGLOBULIN LIGHT CHAIN, ...
Authors:Dealwis, C, Gupta, V, Wilkerson, M.
Deposit date:2003-05-22
Release date:2004-07-13
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural basis of light chain amyloidogenicity: comparison of the thermodynamic properties, fibrillogenic potential and tertiary structural features of four V(lambda)6 proteins
J.Mol.Recog., 17, 2004
1J20
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Crystal Structure of Thermus thermophilus HB8 Argininosuccinate Synthetase in complex with product
Descriptor: ADENOSINE MONOPHOSPHATE, ARGININOSUCCINATE, Argininosuccinate Synthetase, ...
Authors:Goto, M, Hirotsu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2002-12-24
Release date:2003-04-22
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structures of argininosuccinate synthetase in enzyme-ATP-substrates and enzyme-AMP-product forms
J.Biol.Chem., 278, 2003
2CVI
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Crystal structure of hypothetical protein PHS023 from Pyrococcus horikoshii
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 75aa long hypothetical regulatory protein AsnC, POTASSIUM ION
Authors:Kitago, Y, Sakai, N, Matsumoto, D, Yao, M, Aizawa, T, Demura, M, Kawano, K, Nitta, K, Watanabe, N, Tanaka, I.
Deposit date:2005-06-03
Release date:2006-06-03
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of hypothetical protein PHS023 from Pyrococcus horikoshii
TO BE PUBLISHED
4KXZ
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crystal structure of tgfb2 in complex with GC2008.
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 3,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL, GC1008 Heavy Chain, ...
Authors:Mathieu, M, Moulin, A.G, Wei, R.
Deposit date:2013-05-28
Release date:2014-09-24
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.83 Å)
Cite:Structures of a pan-specific antagonist antibody complexed to different isoforms of TGF beta reveal structural plasticity of antibody-antigen interactions.
Protein Sci., 23, 2014
1IZ6
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Crystal Structure of Translation Initiation Factor 5A from Pyrococcus Horikoshii
Descriptor: Initiation Factor 5A
Authors:Yao, M, Ohsawa, A, Kikukawa, S, Tanaka, I, Kimura, M.
Deposit date:2002-09-25
Release date:2003-01-28
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of Hyperthermophilic Archaeal Initiation Factor 5A: A Homologue of Eukaryotic Initiation Factor 5A (eIF-5A)
J.BIOCHEM.(TOKYO), 133, 2003
1PBH
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CRYSTAL STRUCTURE OF HUMAN RECOMBINANT PROCATHEPSIN B AT 3.2 ANGSTROM RESOLUTION
Descriptor: PROCATHEPSIN B
Authors:Podobnik, M, Turk, D.
Deposit date:1997-02-14
Release date:1998-02-25
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structures of human procathepsin B at 3.2 and 3.3 Angstroms resolution reveal an interaction motif between a papain-like cysteine protease and its propeptide.
FEBS Lett., 384, 1996
2CPQ
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Solution structure of the N-terminal KH domain of human FXR1
Descriptor: Fragile X mental retardation syndrome related protein 1, isoform b'
Authors:Nagata, T, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-05-19
Release date:2005-11-19
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the N-terminal KH domain of human FXR1
To be Published
2CQB
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Solution Structure of the RNA recognition motif in Peptidyl-prolyl cis-trans isomerase E
Descriptor: Peptidyl-prolyl cis-trans isomerase E
Authors:Someya, T, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-05-19
Release date:2005-11-19
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution Structure of the RNA recognition motif in Peptidyl-prolyl cis-trans isomerase E
To be Published
2CPI
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Solution structure of the RNA recognition motif of CNOT4
Descriptor: CCR4-NOT transcription complex subunit 4
Authors:Nagata, T, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-05-19
Release date:2005-11-19
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the RNA recognition motif of CNOT4
To be Published
2CWP
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Crystal structure of MetRS related protein from Pyrococcus horikoshii
Descriptor: MetRS related protein
Authors:Murayama, K, Kato-Murayama, M, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-06-23
Release date:2005-12-23
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of MetRS related protein from Pyrococcus horikoshii
To be Published
3ZYZ
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Crystal structure of a glycoside hydrolase family 3 beta-glucosidase, Bgl1 from Hypocrea jecorina at 2.1A resolution.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, BETA-D-GLUCOSIDE GLUCOHYDROLASE, DI(HYDROXYETHYL)ETHER, ...
Authors:Sandgren, M, Kaper, T, Mikkelsen, N.E, Hansson, H, Piens, K, Gudmundsson, M, Larenas, E, Kelemen, B, Karkehabadi, S.
Deposit date:2011-08-30
Release date:2012-12-12
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Biochemical Characterization and Crystal Structures of a Fungal Family 3 Beta-Glucosidase, Cel3A from Hypocrea Jecorina.
J.Biol.Chem., 289, 2014
2MPW
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Solution structure of the LysM region of the E. coli Intimin periplasmic domain
Descriptor: Intimin
Authors:Coles, M, Chaubey, M, Leo, J.C, Linke, D, Schuetz, M.C, Goetz, F, Autenrieth, I.B.
Deposit date:2014-06-05
Release date:2014-11-12
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The Intimin periplasmic domain mediates dimerisation and binding to peptidoglycan.
Mol.Microbiol., 95, 2015
1G0U
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A GATED CHANNEL INTO THE PROTEASOME CORE PARTICLE
Descriptor: MAGNESIUM ION, PROTEASOME COMPONENT C1, PROTEASOME COMPONENT C11, ...
Authors:Groll, M, Bajorek, M, Kohler, A, Moroder, L, Rubin, D.M, Huber, R, Glickman, M.H, Finley, D.
Deposit date:2000-10-09
Release date:2000-11-06
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:A gated channel into the proteasome core particle.
Nat.Struct.Biol., 7, 2000
2CSY
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BU of 2csy by Molmil
Solution structure of the RING domain of the Zinc finger protein 183-like 1
Descriptor: ZINC ION, Zinc finger protein 183-like 1
Authors:Miyamoto, K, Sato, M, Tomizawa, T, Saito, K, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-05-23
Release date:2005-11-23
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the RING domain of the Zinc finger protein 183-like 1
To be Published
3OCV
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BU of 3ocv by Molmil
Structure of Recombinant Haemophilus Influenzae e(P4) Acid Phosphatase mutant D66N complexed with 5'-AMP
Descriptor: ADENOSINE MONOPHOSPHATE, Lipoprotein E, MAGNESIUM ION
Authors:Singh, H, Schuermann, J, Reilly, T, Calcutt, M, Tanner, J.
Deposit date:2010-08-10
Release date:2010-10-20
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.551 Å)
Cite:Recognition of nucleoside monophosphate substrates by Haemophilus influenzae class C acid phosphatase.
J.Mol.Biol., 404, 2010
2CU8
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Solution structure of the LIM domain of human Cysteine-rich protein 2
Descriptor: Cysteine-rich protein 2, ZINC ION
Authors:Yoneyama, M, Sasagawa, A, Tomizawa, T, Tochio, N, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-05-25
Release date:2005-11-25
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the LIM domain of human Cysteine-rich protein 2
To be Published
2CW8
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Crystal structure of intein homing endonuclease II
Descriptor: Endonuclease PI-PkoII, GLYCEROL, SULFATE ION
Authors:Matsumura, H, Takahashi, H, Inoue, T, Hashimoto, H, Nishioka, M, Fujiwara, S, Takagi, M, Imanaka, T, Kai, Y.
Deposit date:2005-06-17
Release date:2006-04-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of intein homing endonuclease II encoded in DNA polymerase gene from hyperthermophilic archaeon Thermococcus kodakaraensis strain KOD1
Proteins, 63, 2006
3ZZ1
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Crystal structure of a glycoside hydrolase family 3 beta-glucosidase, Bgl1 from Hypocrea jecorina at 2.1A resolution.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, BETA-D-GLUCOSIDE GLUCOHYDROLASE, GLYCEROL
Authors:Sandgren, M, Kaper, T, Mikkelsen, N.E, Hansson, H, Piens, K, Gudmundsson, M, Larenas, E, Kelemen, B, Karkehabadi, S.
Deposit date:2011-08-31
Release date:2012-12-12
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Biochemical Characterization and Crystal Structures of a Fungal Family 3 Beta-Glucosidase, Cel3A from Hypocrea Jecorina.
J.Biol.Chem., 289, 2014
4OYA
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Human solAC Complexed with (4-Aminofurazan-3-yl)-[3-(1H-benzoimidazol-2-ylmethoxy)phenyl]methanone
Descriptor: (4-azanyl-1,2,5-oxadiazol-3-yl)-[3-(1H-benzimidazol-2-ylmethoxy)phenyl]methanone, Adenylate cyclase type 10, GLYCEROL
Authors:Vinkovic, M.
Deposit date:2014-02-11
Release date:2014-04-02
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Crystal structure of human soluble adenylate cyclase reveals a distinct, highly flexible allosteric bicarbonate binding pocket.
Chemmedchem, 9, 2014
5THP
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Rhodocetin in complex with the integrin alpha2-A domain
Descriptor: CHLORIDE ION, GLYCEROL, Integrin alpha-2, ...
Authors:McDougall, M, Orriss, G.L, Stetefeld, J.
Deposit date:2016-09-30
Release date:2017-08-02
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (3.006 Å)
Cite:Dramatic and concerted conformational changes enable rhodocetin to block alpha 2 beta 1 integrin selectively.
PLoS Biol., 15, 2017

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