Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 51689 results

1WD8
DownloadVisualize
BU of 1wd8 by Molmil
Calcium free form of human peptidylarginine deiminase type4 (PAD4)
Descriptor: Protein-arginine deiminase type IV
Authors:Arita, K, Hashimoto, H, Shimizu, T, Nakashima, K, Yamada, M, Sato, M.
Deposit date:2004-05-12
Release date:2004-07-13
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural basis for Ca(2+)-induced activation of human PAD4
Nat.Struct.Mol.Biol., 11, 2004
1J0Z
DownloadVisualize
BU of 1j0z by Molmil
Beta-amylase from Bacillus cereus var. mycoides in complex with maltose
Descriptor: Beta-amylase, CALCIUM ION, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, ...
Authors:Oyama, T, Miyake, H, Kusunoki, M, Nitta, Y.
Deposit date:2002-11-25
Release date:2003-06-17
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structures of beta-Amylase from Bacillus cereus var. mycoides in Complexes with Substrate Analogs and Affinity-Labeling Reagents
J.BIOCHEM.(TOKYO), 133, 2003
7N2H
DownloadVisualize
BU of 7n2h by Molmil
X-Ray structure of a sequence variant of a repeat segment of the yeast prion New1p
Descriptor: prion New1p
Authors:Richards, L.S, Flores, M.D, Zee, C.T, Glynn, C, Gallagher-Jones, M, Sawaya, M.R.
Deposit date:2021-05-29
Release date:2022-06-01
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.102 Å)
Cite:Fragment-Based Ab Initio Phasing of Peptidic Nanocrystals by MicroED.
Acs Bio Med Chem Au, 3, 2023
6OLJ
DownloadVisualize
BU of 6olj by Molmil
CryoEM structure of PilB from Geobacter metallireducens: C2ccocco conformation
Descriptor: Type IV pilus biogenesis ATPase PilB
Authors:McCallum, M, Howell, P.L.
Deposit date:2019-04-16
Release date:2019-11-20
Last modified:2023-08-16
Method:ELECTRON MICROSCOPY (7.8 Å)
Cite:Multiple conformations facilitate PilT function in the type IV pilus.
Nat Commun, 10, 2019
7N2F
DownloadVisualize
BU of 7n2f by Molmil
MicroED structure of human CPEB3 segment (154-161) straight polymorph phased by ARCIMBOLDO-BORGES
Descriptor: CPEB3
Authors:Flores, M.D, Richards, L.S, Zee, C.T, Glynn, C, Gallagher-Jones, M, Sawaya, M.R.
Deposit date:2021-05-29
Release date:2022-06-01
Last modified:2024-05-22
Method:ELECTRON CRYSTALLOGRAPHY (1.2 Å)
Cite:Fragment-Based Ab Initio Phasing of Peptidic Nanocrystals by MicroED.
Acs Bio Med Chem Au, 3, 2023
1J0Y
DownloadVisualize
BU of 1j0y by Molmil
Beta-amylase from Bacillus cereus var. mycoides in complex with glucose
Descriptor: Beta-amylase, CALCIUM ION, beta-D-glucopyranose
Authors:Oyama, T, Miyake, H, Kusunoki, M, Nitta, Y.
Deposit date:2002-11-25
Release date:2003-06-17
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structures of beta-Amylase from Bacillus cereus var. mycoides in Complexes with Substrate Analogs and Affinity-Labeling Reagents
J.BIOCHEM.(TOKYO), 133, 2003
1WEE
DownloadVisualize
BU of 1wee by Molmil
Solution structure of PHD domain in PHD finger family protein
Descriptor: PHD finger family protein, ZINC ION
Authors:He, F, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Terada, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-24
Release date:2004-11-24
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of PHD domain in PHD finger family protein
To be Published
6V08
DownloadVisualize
BU of 6v08 by Molmil
Crystal structure of human recombinant Beta-2 glycoprotein I (hrB2GPI)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-2-glycoprotein 1, SULFATE ION, ...
Authors:Chen, Z, Ruben, E.A, Planer, W, Chinnaraj, M, Zuo, X, Pengo, V, Macor, P, Tedesco, F, Pozzi, N.
Deposit date:2019-11-18
Release date:2020-06-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.58 Å)
Cite:The J-elongated conformation of beta2-glycoprotein I predominates in solution: implications for our understanding of antiphospholipid syndrome.
J.Biol.Chem., 295, 2020
1WF0
DownloadVisualize
BU of 1wf0 by Molmil
Solution structure of RRM domain in TAR DNA-binding protein-43
Descriptor: TAR DNA-binding protein-43
Authors:He, F, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Terada, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-25
Release date:2004-11-25
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of RRM domain in TAR DNA-binding protein-43
To be Published
7N2I
DownloadVisualize
BU of 7n2i by Molmil
MicroED structure of human LECT2 (45-53) phased by ARCIMBOLDO-BORGES
Descriptor: LECT2
Authors:Richards, L.S, Flores, M.D, Zee, C.T, Glynn, C, Gallagher-Jones, M, Sawaya, M.R.
Deposit date:2021-05-29
Release date:2022-06-01
Last modified:2024-05-22
Method:ELECTRON CRYSTALLOGRAPHY (1.402 Å)
Cite:Fragment-Based Ab Initio Phasing of Peptidic Nanocrystals by MicroED.
Acs Bio Med Chem Au, 3, 2023
1J2W
DownloadVisualize
BU of 1j2w by Molmil
Tetrameric Structure of aldolase from Thermus thermophilus HB8
Descriptor: Aldolase protein
Authors:Lokanath, N.K, Shiromizu, I, Miyano, M, Yokoyama, S, Kuramitsu, S, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-01-14
Release date:2003-04-08
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure of aldolase from Thermus thermophilus HB8 showing the contribution of oligomeric state to thermostability.
Acta Crystallogr.,Sect.D, 60, 2004
1WG1
DownloadVisualize
BU of 1wg1 by Molmil
Solution structure of RNA binding domain in BAB13405(homolog EXC-7)
Descriptor: KIAA1579 protein
Authors:Tsuda, K, Muto, Y, Nagata, T, Suzuki, S, Someya, T, Kigawa, T, Terada, T, Shirouzu, M, Inoue, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-27
Release date:2004-11-27
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:Solution structure of RNA binding domain in BAB13405(homolog EXC-7)
To be Published
7N2D
DownloadVisualize
BU of 7n2d by Molmil
MicroED structure of human zinc finger protein 292 segment (534-542) phased by ARCIMBOLDO-BORGES
Descriptor: DIMETHYL SULFOXIDE, zinc finger protein 292
Authors:Richards, L.S, Flores, M.D, Zee, C.T, Glynn, C, Gallagher-Jones, M, Sawaya, M.R.
Deposit date:2021-05-28
Release date:2022-06-01
Last modified:2024-05-22
Method:ELECTRON CRYSTALLOGRAPHY (1.503 Å)
Cite:Fragment-Based Ab Initio Phasing of Peptidic Nanocrystals by MicroED.
Acs Bio Med Chem Au, 3, 2023
6OYR
DownloadVisualize
BU of 6oyr by Molmil
X-ray crystal structure of wild type HIV-1 protease in complex with GRL-002
Descriptor: (3S,3aR,5R,7aS,8S)-hexahydro-4H-3,5-methanofuro[2,3-b]pyran-8-yl {(2S,3R)-1-(3-fluorophenyl)-3-hydroxy-4-[(2-methylpropyl)({2-[(propan-2-yl)amino]-1,3-benzoxazol-6-yl}sulfonyl)amino]butan-2-yl}carbamate, Protease
Authors:Bulut, H, Hattori, S.I, Aoki-Ogata, H, Hayashi, H, Aoki, M, Ghosh, A.K, Mitsuya, H.
Deposit date:2019-05-15
Release date:2020-05-20
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Single atom changes in newly synthesized HIV protease inhibitors reveal structural basis for extreme affinity, high genetic barrier, and adaptation to the HIV protease plasticity.
Sci Rep, 10, 2020
3LEU
DownloadVisualize
BU of 3leu by Molmil
HIGH RESOLUTION 1H NMR STUDY OF LEUCOCIN A IN DODECYLPHOSPHOCHOLINE MICELLES, 19 STRUCTURES (1:40 RATIO OF LEUCOCIN A:DPC) (0.1% TFA)
Descriptor: LEUCOCIN A
Authors:Gallagher, N.L.F, Sailer, M, Niemczura, W.P, Nakashima, T.T, Stiles, M.E, Vederas, J.C.
Deposit date:1997-05-20
Release date:1997-11-26
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:Three-dimensional structure of leucocin A in trifluoroethanol and dodecylphosphocholine micelles: spatial location of residues critical for biological activity in type IIa bacteriocins from lactic acid bacteria.
Biochemistry, 36, 1997
6OZ3
DownloadVisualize
BU of 6oz3 by Molmil
Crystal structure of broadly neutralizing antibody N49P9.1 Fab in complex with HIV-1 Clade A/E strain 93TH057 gp120 core
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, N49P9.1 antibody Fab heavy chain, N49P9.1 antibody Fab light chain, ...
Authors:Tolbert, W.D, Pazgier, M.
Deposit date:2019-05-15
Release date:2020-08-19
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Crystal structure of broadly neutralizing antibody N49P9.1 Fab in complex with HIV-1 Clade A/E strain 93TH)57 gp120 core
To Be Published
7N2E
DownloadVisualize
BU of 7n2e by Molmil
MicroED structure of human CPEB3 segment (154-161) straight polymorph
Descriptor: CPEB3
Authors:Flores, M.D, Richards, L.S, Zee, C.T, Glynn, C, Gallagher-Jones, M, Sawaya, M.R.
Deposit date:2021-05-29
Release date:2022-06-01
Last modified:2024-05-22
Method:ELECTRON CRYSTALLOGRAPHY (1 Å)
Cite:Fragment-Based Ab Initio Phasing of Peptidic Nanocrystals by MicroED.
Acs Bio Med Chem Au, 3, 2023
1WHN
DownloadVisualize
BU of 1whn by Molmil
Solution structure of the dsRBD from hypothetical protein BAB26260
Descriptor: hypothetical protein RIKEN cDNA 2310016K04
Authors:Nagata, T, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-28
Release date:2004-11-28
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the dsRBD from hypothetical protein BAB26260
To be Published
6M3P
DownloadVisualize
BU of 6m3p by Molmil
Crystal structure of AnkG/beta2-spectrin complex
Descriptor: Ankyrin-3, Spectrin beta chain, non-erythrocytic 1
Authors:Li, J, Chen, K, Zhu, R, Zhang, M.
Deposit date:2020-03-04
Release date:2020-05-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.312 Å)
Cite:Structural Basis Underlying Strong Interactions between Ankyrins and Spectrins.
J.Mol.Biol., 432, 2020
6OZV
DownloadVisualize
BU of 6ozv by Molmil
The structure of condensation and adenylation domains of teixobactin-producing nonribosomal peptide synthetase Txo1 serine module in complex with AMP
Descriptor: ADENOSINE MONOPHOSPHATE, GLYCEROL, SULFATE ION, ...
Authors:Tan, K, Zhou, M, Jedrzejczak, R, Babnigg, G, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2019-05-16
Release date:2019-05-29
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Structures of teixobactin-producing nonribosomal peptide synthetase condensation and adenylation domains.
Curr Res Struct Biol, 2, 2020
1WJN
DownloadVisualize
BU of 1wjn by Molmil
Solution structure of the C-terminal ubiquitin-like domain of mouse tubulin-specific chaperone e
Descriptor: Tubulin-folding protein TBCE
Authors:Sato, M, Tochio, N, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-29
Release date:2004-11-29
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the C-terminal ubiquitin-like domain of mouse tubulin-specific chaperone e
To be Published
7N4P
DownloadVisualize
BU of 7n4p by Molmil
Crystal Structure of Lizard Cadherin-23 EC1-2
Descriptor: CALCIUM ION, Cadherin 23, SODIUM ION
Authors:Nisler, C.R, Sotomayor, M.
Deposit date:2021-06-04
Release date:2022-06-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.097 Å)
Cite:Interpreting the Evolutionary Echoes of a Protein Complex Essential for Inner-Ear Mechanosensation.
Mol.Biol.Evol., 40, 2023
6EZ4
DownloadVisualize
BU of 6ez4 by Molmil
NMR structure of the C-terminal domain of the human RPAP3 protein
Descriptor: RNA polymerase II-associated protein 3
Authors:Fabre, P, Chagot, M.E, Bragantini, B, Manival, X, Quinternet, M.
Deposit date:2017-11-14
Release date:2018-04-18
Last modified:2024-01-17
Method:SOLUTION NMR
Cite:The RPAP3-Cterminal domain identifies R2TP-like quaternary chaperones.
Nat Commun, 9, 2018
6P3O
DownloadVisualize
BU of 6p3o by Molmil
Tetrahydroprotoberberine N-methyltransferase in complex with (S)-cis-N-methylstylopine and S-adenosylhomocysteine
Descriptor: (5S,12bS)-5-methyl-6,7,12b,13-tetrahydro-2H,4H,10H-[1,3]dioxolo[4,5-g][1,3]dioxolo[7,8]isoquinolino[3,2-a]isoquinolin-5-ium, S-ADENOSYL-L-HOMOCYSTEINE, Tetrahydroprotoberberine N-methyltransferase
Authors:Lang, D.E, Morris, J.S, Rowley, M, Torres, M.A, Maksimovich, V.A, Facchini, P.J, Ng, K.K.S.
Deposit date:2019-05-24
Release date:2019-08-14
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure-function studies of tetrahydroprotoberberineN-methyltransferase reveal the molecular basis of stereoselective substrate recognition.
J.Biol.Chem., 294, 2019
6V37
DownloadVisualize
BU of 6v37 by Molmil
K2P2.1(TREK-1)I110D:RuR:ML335 bound channel structure
Descriptor: CADMIUM ION, DODECANE, HEXANE, ...
Authors:Pope, L, Lolicato, M, Minor, D.L.
Deposit date:2019-11-25
Release date:2020-02-26
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Polynuclear Ruthenium Amines Inhibit K2PChannels via a "Finger in the Dam" Mechanism.
Cell Chem Biol, 2020

224572

PDB entries from 2024-09-04

PDB statisticsPDBj update infoContact PDBjnumon