Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 52259 results

3ZYQ
DownloadVisualize
BU of 3zyq by Molmil
Crystal structure of the tandem VHS and FYVE domains of Hepatocyte growth factor-regulated tyrosine kinase substrate (HGS-Hrs) at 1.48 A resolution
Descriptor: 1,2-ETHANEDIOL, HEPATOCYTE GROWTH FACTOR-REGULATED TYROSINE KINASE SUBSTRATE, SULFATE ION, ...
Authors:Muniz, J.R.C, Ayinampudi, V, Shrestha, L, Krojer, T, Vollmar, M, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Weigelt, J, Bountra, C, Bullock, A.
Deposit date:2011-08-24
Release date:2011-09-07
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Crystal Structure of the Tandem Vhs and Fyve Domains of Hepatocyte Growth Factor-Regulated Tyrosine Kinase Substrate (Hgs-Hrs) at 1.48 A Resolution
To be Published
3ZUM
DownloadVisualize
BU of 3zum by Molmil
Photosynthetic Reaction Centre Mutant with Phe L146 replaced with Ala
Descriptor: BACTERIOCHLOROPHYLL A, BACTERIOPHEOPHYTIN A, FE (III) ION, ...
Authors:Gibasiewicz, K, Pajzderska, M, Potter, J.A, Fyfe, P.K, Dobek, A, Brettel, K, Jones, M.R.
Deposit date:2011-07-19
Release date:2011-11-16
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Mechanism of Recombination of the P(+)H(A)(-) Radical Pair in Mutant Rhodobacter Sphaeroides Reaction Centers with Modified Free Energy Gaps between P(+)B(A)(-) and P(+)H(A)(-).
J Phys Chem B, 115, 2011
3ZVK
DownloadVisualize
BU of 3zvk by Molmil
Crystal structure of VapBC2 from Rickettsia felis bound to a DNA fragment from their promoter
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ANTITOXIN OF TOXIN-ANTITOXIN SYSTEM VAPB, DNA, ...
Authors:Mate, M.J, Ortiz-Lombardia, M, Cambillau, C.
Deposit date:2011-07-25
Release date:2011-12-14
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of the DNA-Bound Vapbc2 Antitoxin/Toxin Pair from Rickettsia Felis.
Nucleic Acids Res., 40, 2012
4ANJ
DownloadVisualize
BU of 4anj by Molmil
MYOSIN VI (MDinsert2-GFP fusion) PRE-POWERSTROKE STATE (MG.ADP.AlF4)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CALCIUM ION, CALMODULIN, ...
Authors:Menetrey, J, Isabet, T, Ropars, V, Mukherjea, M, Pylypenko, O, Liu, X, Perez, J, Vachette, P, Sweeney, H.L, Houdusse, A.M.
Deposit date:2012-03-19
Release date:2012-10-17
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Processive Steps in the Reverse Direction Require Uncoupling of the Lead Head Lever Arm of Myosin Vi.
Mol.Cell, 48, 2012
2ODH
DownloadVisualize
BU of 2odh by Molmil
Restriction Endonuclease BCNI in the Absence of DNA
Descriptor: ACETATE ION, DI(HYDROXYETHYL)ETHER, R.BcnI
Authors:Sokolowska, M, Kaus-Drobek, M, Czapinska, H, Tamulaitis, G, Szczepanowski, R.H, Urbanke, K, Siksnys, V, Bochtler, M.
Deposit date:2006-12-22
Release date:2007-03-20
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Monomeric restriction endonuclease BcnI in the apo form and in an asymmetric complex with target DNA.
J.Mol.Biol., 369, 2007
4AKZ
DownloadVisualize
BU of 4akz by Molmil
CRYSTAL STRUCTURE OF VIRB8 FROM BRUCELLA SUIS
Descriptor: TYPE IV SECRETION SYSTEM PROTEIN VIRB8
Authors:Coincon, M, Smith, M.A, Sygusch, J, Baron, C.
Deposit date:2012-02-29
Release date:2012-09-05
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Identification of the Binding Site of Brucella Virb8 Interaction Inhibitors.
Chem.Biol., 19, 2012
434D
DownloadVisualize
BU of 434d by Molmil
5'-R(*UP*AP*GP*CP*UP*CP*C)-3', 5'-R(*GP*GP*GP*GP*CP*UP*A)-3'
Descriptor: RNA (5'-R(*GP*GP*GP*GP*CP*UP*A)-3'), RNA (5'-R(*UP*AP*GP*CP*UP*CP*C)-3'), SODIUM ION, ...
Authors:Mueller, U, Schuebel, H, Sprinzl, M, Heinemann, U.
Deposit date:1998-10-23
Release date:1999-06-14
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.16 Å)
Cite:Crystal structure of acceptor stem of tRNA(Ala) from Escherichia coli shows unique G.U wobble base pair at 1.16 A resolution.
RNA, 5, 1999
462D
DownloadVisualize
BU of 462d by Molmil
CRYSTAL STRUCTURE OF THE HIV-1 GENOMIC RNA DIMERIZATION INITIATION SITE
Descriptor: MAGNESIUM ION, RNA (5'-R(*CP*UP*UP*GP*CP*UP*GP*AP*GP*GP*UP*GP*CP*AP*CP*AP*CP*AP*GP*CP*AP*AP*G) -3')
Authors:Ennifar, E, Yusupov, M, Walter, P, Marquet, R, Ehresmann, C, Ehresmann, B, Dumas, P.
Deposit date:1999-03-18
Release date:1999-12-02
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The crystal structure of the dimerization initiation site of genomic HIV-1 RNA reveals an extended duplex with two adenine bulges.
Structure Fold.Des., 7, 1999
472D
DownloadVisualize
BU of 472d by Molmil
STRUCTURE OF AN OCTAMER RNA WITH TANDEM GG/UU MISPAIRS
Descriptor: RNA (5'-R(*GP*UP*AP*GP*GP*CP*AP*C)-3'), RNA (5'-R(*GP*UP*GP*UP*UP*UP*AP*C)-3')
Authors:Deng, J, Sundaralingam, M.
Deposit date:1999-05-14
Release date:2000-11-27
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Synthesis and crystal structure of an octamer RNA r(guguuuac)/r(guaggcac) with G.G/U.U tandem wobble base pairs: comparison with other tandem G.U pairs.
Nucleic Acids Res., 28, 2000
3FWH
DownloadVisualize
BU of 3fwh by Molmil
Structure of haloalkane dehalogenase mutant Dha15 (I135F/C176Y) from Rhodococcus rhodochrous
Descriptor: ACETATE ION, CHLORIDE ION, Haloalkane dehalogenase, ...
Authors:Gavira, J.A, Stsiapanava, A, Kuty, M, Dohnalek, J, Lapkouski, M, Kuta Smatanova, I.
Deposit date:2009-01-18
Release date:2010-02-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:Atomic resolution studies of haloalkane dehalogenases DhaA04, DhaA14 and DhaA15 with engineered access tunnels.
Acta Crystallogr.,Sect.D, 66, 2010
4A13
DownloadVisualize
BU of 4a13 by Molmil
model refined against symmetry-free cryo-EM map of TRiC-ADP
Descriptor: T-COMPLEX PROTEIN 1 SUBUNIT BETA
Authors:Cong, Y, Schroder, G.F, Meyer, A.S, Jakana, J, Ma, B, Dougherty, M.T, Schmid, M.F, Reissmann, S, Levitt, M, Ludtke, S.L, Frydman, J, Chiu, W.
Deposit date:2011-09-13
Release date:2012-02-15
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (11.3 Å)
Cite:Symmetry-Free Cryo-Em Structures of the Chaperonin Tric Along its ATPase-Driven Conformational Cycle.
Embo J., 31, 2012
4A8B
DownloadVisualize
BU of 4a8b by Molmil
Symmetrized cryo-EM reconstruction of E. coli DegQ 12-mer in complex with lysozymes
Descriptor: LYSOZYME C, PERIPLASMIC PH-DEPENDENT SERINE ENDOPROTEASE DEGQ
Authors:Malet, H, Canellas, F, Sawa, J, Yan, J, Thalassinos, K, Ehrmann, M, Clausen, T, Saibil, H.R.
Deposit date:2011-11-20
Release date:2012-01-11
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (13 Å)
Cite:Newly Folded Substrates Inside the Molecular Cage of the Htra Chaperone Degq
Nat.Struct.Mol.Biol., 19, 2012
4X8P
DownloadVisualize
BU of 4x8p by Molmil
Crystal structure of Ash2L SPRY domain in complex with RbBP5
Descriptor: GLYCEROL, Retinoblastoma-binding protein 5, Set1/Ash2 histone methyltransferase complex subunit ASH2,Set1/Ash2 histone methyltransferase complex subunit ASH2
Authors:Zhang, P, Chaturvedi, C.P, Brunzelle, J.S, Skiniotis, G, Brand, M, Shilatifard, A, Couture, J.-F.
Deposit date:2014-12-10
Release date:2015-01-28
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A phosphorylation switch on RbBP5 regulates histone H3 Lys4 methylation.
Genes Dev., 29, 2015
4AA1
DownloadVisualize
BU of 4aa1 by Molmil
Crystal structure of ANCE in complex with Angiotensin-II
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ANGIOTENSIN-2, ANGIOTENSIN-CONVERTING ENZYME, ...
Authors:Isaac, R.E, Akif, M, Schwager, S.L.U, Masuyer, G, Sturrock, E.D, Acharya, K.R.
Deposit date:2011-11-30
Release date:2012-10-31
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Structural Basis of Peptide Recognition by the Angiotensin-I Converting Enzyme Homologue Ance from Drosophila Melanogaster
FEBS J., 279, 2012
1NCY
DownloadVisualize
BU of 1ncy by Molmil
TROPONIN-C, COMPLEX WITH MANGANESE
Descriptor: MANGANESE (II) ION, SULFATE ION, TROPONIN C
Authors:Sundaralingam, M, Rao, S.T.
Deposit date:1996-06-02
Release date:1997-01-11
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:X-ray structures of Mn, Cd and Tb metal complexes of troponin C.
Acta Crystallogr.,Sect.D, 52, 1996
4AAR
DownloadVisualize
BU of 4aar by Molmil
ATP-triggered molecular mechanics of the chaperonin GroEL
Descriptor: 60 KDA CHAPERONIN, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Clare, D.K, Vasishtan, D, Stagg, S, Quispe, J, Farr, G.W, Topf, M, Horwich, A.L, Saibil, H.R.
Deposit date:2011-12-05
Release date:2012-12-12
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (8 Å)
Cite:ATP-Triggered Conformational Changes Delineate Substrate-Binding and -Folding Mechanics of the Groel Chaperonin.
Cell(Cambridge,Mass.), 149, 2012
1NCZ
DownloadVisualize
BU of 1ncz by Molmil
TROPONIN C
Descriptor: SULFATE ION, TERBIUM(III) ION, TROPONIN C
Authors:Sundaralingam, M, Rao, S.T.
Deposit date:1996-06-02
Release date:1996-12-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:X-ray structures of Mn, Cd and Tb metal complexes of troponin C.
Acta Crystallogr.,Sect.D, 52, 1996
4AKC
DownloadVisualize
BU of 4akc by Molmil
Structure of Galactose Binding lectin from Champedak (CGB) with Gal(beta)1,3-GalNac
Descriptor: AGGLUTININ ALPHA CHAIN, AGGLUTININ BETA-4 CHAIN, beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-alpha-D-galactopyranose
Authors:Gabrielsen, M, Abdul-Rahman, P.S, Othman, S, Hashim, O.H, Cogdell, R.J.
Deposit date:2012-02-22
Release date:2013-02-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structures and Binding Specificity of Galactose- and Mannose-Binding Lectins from Champedak: Differences from Jackfruit Lectins
Acta Crystallogr.,Sect.F, 70, 2014
4AM6
DownloadVisualize
BU of 4am6 by Molmil
C-TERMINAL DOMAIN OF ACTIN-RELATED PROTEIN ARP8 FROM S. CEREVISIAE
Descriptor: ACTIN-LIKE PROTEIN ARP8, SULFATE ION
Authors:Wuerges, J, Saravanan, M, Bose, D, Cook, N.J, Zhang, X, Wigley, D.B.
Deposit date:2012-03-07
Release date:2012-12-12
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Interactions between the Nucleosome Histone Core and Arp8 in the Ino80 Chromatin Remodeling Complex.
Proc.Natl.Acad.Sci.USA, 109, 2012
4ACP
DownloadVisualize
BU of 4acp by Molmil
Deactivation of human IgG1 Fc by endoglycosidase treatment
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, IG GAMMA-1 CHAIN C REGION
Authors:Raman, K, Bowden, T.A, Krishna, B.A, Dwek, R.A, Crispin, M, Scanlan, C.N.
Deposit date:2011-12-16
Release date:2012-04-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Selective Deactivation of Serum Igg: A General Strategy for the Enhancement of Monoclonal Antibody Receptor Interactions.
J.Mol.Biol., 420, 2012
4A2L
DownloadVisualize
BU of 4a2l by Molmil
Structure of the periplasmic domain of the heparin and heparan sulphate sensing hybrid two component system BT4663 in apo and ligand bound forms
Descriptor: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, DI(HYDROXYETHYL)ETHER, ...
Authors:Lowe, E.C, Basle, A, Czjzek, M, Firbank, S.J, Bolam, D.N.
Deposit date:2011-09-27
Release date:2012-05-02
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:A Scissor Blade-Like Closing Mechanism Implicated in Transmembrane Signaling in a Bacteroides Hybrid Two-Component System.
Proc.Natl.Acad.Sci.USA, 109, 2012
1NCX
DownloadVisualize
BU of 1ncx by Molmil
TROPONIN C
Descriptor: CADMIUM ION, SULFATE ION, TROPONIN C
Authors:Sundaralingam, M, Rao, S.T.
Deposit date:1996-06-02
Release date:1996-12-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:X-ray structures of Mn, Cd and Tb metal complexes of troponin C.
Acta Crystallogr.,Sect.D, 52, 1996
4A91
DownloadVisualize
BU of 4a91 by Molmil
Crystal structure of the glutamyl-queuosine tRNAAsp synthetase from E. coli complexed with L-glutamate
Descriptor: GLUTAMIC ACID, GLUTAMYL-Q TRNA(ASP) SYNTHETASE, ZINC ION
Authors:Blaise, M, Olieric, V, Sauter, C, Lorber, B, Roy, B, Karmakar, S, Banerjee, R, Becker, H.D, Kern, D.
Deposit date:2011-11-22
Release date:2012-01-11
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal Structure of Glutamyl-Queuosine Trnaasp Synthetase Complexed with L-Glutamate: Structural Elements Mediating tRNA-Independent Activation of Glutamate and Glutamylation of Trnaasp Anticodon.
J.Mol.Biol., 381, 2008
4AOE
DownloadVisualize
BU of 4aoe by Molmil
Biomphalaria glabrata Acetylcholine-binding protein type 2 (BgAChBP2)
Descriptor: ACETYLCHOLINE-BINDING PROTEIN TYPE 2
Authors:Saur, M, Moeller, V, Kapetanopoulos, K, Braukmann, S, Gebauer, W, Tenzer, S, Markl, J.
Deposit date:2012-03-26
Release date:2012-08-29
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (6 Å)
Cite:Acetylcholine-Binding Protein in the Hemolymph of the Planorbid Snail Biomphalaria Glabrata is a Pentagonal Dodecahedron (60 Subunits)
Plos One, 7, 2012
4AQY
DownloadVisualize
BU of 4aqy by Molmil
Structure of ribosome-apramycin complexes
Descriptor: 16S RIBOSOMAL RNA, 30S RIBOSOMAL PROTEIN S10, 30S RIBOSOMAL PROTEIN S11, ...
Authors:Matt, T, Ng, C.L, Lang, K, Sha, S.H, Akbergenov, R, Shcherbakov, D, Meyer, M, Duscha, S, Xie, J, Dubbaka, S.R, Perez-Fernandez, D, Vasella, A, Ramakrishnan, V, Schacht, J, Bottger, E.C.
Deposit date:2012-04-20
Release date:2012-07-18
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Dissociation of Antibacterial Activity and Aminoglycoside Ototoxicity in the 4-Monosubstituted 2-Deoxystreptamine Apramycin.
Proc.Natl.Acad.Sci.USA, 109, 2012

227344

PDB entries from 2024-11-13

PDB statisticsPDBj update infoContact PDBjnumon