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PDB: 51964 results

4NO6
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yCP in complex with Z-Leu-Leu-Leu-vinylsulfone
Descriptor: MAGNESIUM ION, N-[(benzyloxy)carbonyl]-L-leucyl-N-[(3S)-5-methyl-1-(methylsulfonyl)hexan-3-yl]-L-leucinamide, Probable proteasome subunit alpha type-7, ...
Authors:Stein, M.L, Cui, H, Beck, P, Dubiella, C, Voss, C, Krueger, A, Schmidt, B, Groll, M.
Deposit date:2013-11-19
Release date:2014-02-12
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Systematic Comparison of Peptidic Proteasome Inhibitors Highlights the alpha-Ketoamide Electrophile as an Auspicious Reversible Lead Motif.
Angew.Chem.Int.Ed.Engl., 53, 2014
1JH7
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Semi-reduced Inhibitor-bound Cyclic Nucleotide Phosphodiesterase from Arabidopsis thaliana
Descriptor: SULFATE ION, URIDINE-2',3'-VANADATE, cyclic phosphodiesterase
Authors:Hofmann, A, Grella, M, Botos, I, Filipowicz, W, Wlodawer, A.
Deposit date:2001-06-27
Release date:2002-02-06
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structures of the semireduced and inhibitor-bound forms of cyclic nucleotide phosphodiesterase from Arabidopsis thaliana.
J.Biol.Chem., 277, 2002
3D2Q
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BU of 3d2q by Molmil
Crystal structure of MBNL1 tandem zinc finger 3 and 4 domain
Descriptor: Muscleblind-like protein 1, ZINC ION
Authors:Teplova, M, Patel, D.J.
Deposit date:2008-05-08
Release date:2008-12-02
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural insights into RNA recognition by the alternative-splicing regulator muscleblind-like MBNL1.
Nat.Struct.Mol.Biol., 15, 2008
3OUU
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BU of 3ouu by Molmil
Crystal Structure of Biotin Carboxylase-beta-gamma-ATP Complex from Campylobacter jejuni
Descriptor: Biotin carboxylase, CACODYLATE ION, CALCIUM ION, ...
Authors:Maltseva, N, Kim, Y, Makowska-Grzyska, M, Mulligan, R, Papazisi, L, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2010-09-15
Release date:2010-10-20
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.252 Å)
Cite:Crystal Structure of Biotin Carboxylase-beta-gamma-ATP Complex from Campylobacter jejuni
TO BE PUBLISHED
6R8H
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BU of 6r8h by Molmil
Triosephosphate isomerase from liver fluke (Fasciola hepatica).
Descriptor: SULFATE ION, Triosephosphate isomerase
Authors:Ferraro, F, Corvo, I, Bergalli, L, Ilarraz, A, Cabrera, M, Gil, J, Susuki, B, Caffrey, C, Timson, D.J, Robert, X, Guillon, C, Alvarez, G.
Deposit date:2019-04-01
Release date:2020-02-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Novel and selective inactivators of Triosephosphate isomerase with anti-trematode activity.
Sci Rep, 10, 2020
1JEZ
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BU of 1jez by Molmil
THE STRUCTURE OF XYLOSE REDUCTASE, A DIMERIC ALDO-KETO REDUCTASE FROM CANDIDA TENUIS
Descriptor: XYLOSE REDUCTASE
Authors:Kavanagh, K.L, Klimacek, M, Nidetzky, B, Wilson, D.K.
Deposit date:2001-06-19
Release date:2002-07-05
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The structure of apo and holo forms of xylose reductase, a dimeric aldo-keto reductase from Candida tenuis.
Biochemistry, 41, 2002
4NEH
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BU of 4neh by Molmil
An internal ligand-bound, metastable state of a leukocyte integrin, aXb2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Sen, M, Yuki, K, Springer, T.A.
Deposit date:2013-10-29
Release date:2014-01-15
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.7505 Å)
Cite:An internal ligand-bound, metastable state of a leukocyte integrin, alpha X beta 2.
J.Cell Biol., 203, 2013
6GE7
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BU of 6ge7 by Molmil
Thermodynamic, Crystallographic and Computational Studies of Non Mammalian Fatty Acid Binding to Bovine b-Lactoglobulin
Descriptor: Beta-lactoglobulin, nonadecanoic acid
Authors:Kontopidis, G, Rovoli, M.
Deposit date:2018-04-25
Release date:2018-06-20
Last modified:2018-07-11
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Thermodynamic, crystallographic and computational studies of non-mammalian fatty acid binding to bovine beta-Lactoglobulin.
Int. J. Biol. Macromol., 118, 2018
6JPT
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BU of 6jpt by Molmil
Crystal structure of human PAC3 homodimer (trigonal form)
Descriptor: POTASSIUM ION, Proteasome assembly chaperone 3, THIOCYANATE ION
Authors:Satoh, T, Yagi-Utsumi, M, Okamoto, K, Kurimoto, E, Tanaka, K, Kato, K.
Deposit date:2019-03-27
Release date:2019-05-29
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (0.96 Å)
Cite:Molecular and Structural Basis of the Proteasome alpha Subunit Assembly Mechanism Mediated by the Proteasome-Assembling Chaperone PAC3-PAC4 Heterodimer.
Int J Mol Sci, 20, 2019
3OWQ
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BU of 3owq by Molmil
X-Ray Structure of Lin1025 protein from Listeria innocua, Northeast Structural Genomics Consortium Target LkR164
Descriptor: DI(HYDROXYETHYL)ETHER, Lin1025 protein
Authors:Kuzin, A, Su, M, Lew, S, Seetharaman, J, Patel, P, Xiao, R, Ciccosanti, C, Lee, D, Everett, J.K, Nair, R, Acton, T.B, Rost, B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
Deposit date:2010-09-20
Release date:2010-10-20
Last modified:2012-02-22
Method:X-RAY DIFFRACTION (2.606 Å)
Cite:Northeast Structural Genomics Consortium Target LkR164
To be published
3CUH
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BU of 3cuh by Molmil
Cellulomonas fimi Xylanase/Cellulase Cex (Cf Xyn10A) in complex with cellotriose-like isofagomine
Descriptor: (3R,4R,5R)-3-hydroxy-5-(hydroxymethyl)piperidin-4-yl 4-O-beta-D-glucopyranosyl-beta-D-glucopyranoside, Exo-beta-1,4-glucanase
Authors:Kuntz, D.A, Saul, M, Rose, D.R.
Deposit date:2008-04-16
Release date:2009-04-21
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Probing the binding sites of Family 10 and 11 Xylanases with extended Oligosaccharides
to be published
3OS4
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BU of 3os4 by Molmil
The Crystal Structure of Nicotinate Phosphoribosyltransferase from Yersinia pestis
Descriptor: ACETIC ACID, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Maltseva, N, Kim, Y, Gu, M, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2010-09-08
Release date:2010-09-22
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (1.601 Å)
Cite:The Crystal Structure of Nicotinate Phosphoribosyltransferase from Yersinia pestis
TO BE PUBLISHED
4JNK
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BU of 4jnk by Molmil
Lactate Dehydrogenase A in complex with inhibitor compound 22
Descriptor: (2R)-2-{[5-cyano-4-(3,4-dichlorophenyl)-6-oxo-1,6-dihydropyrimidin-2-yl]sulfanyl}-N-(4-sulfamoylphenyl)propanamide, 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Eigenbrot, C, Ultsch, M.
Deposit date:2013-03-15
Release date:2013-05-22
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.896 Å)
Cite:Identification of substituted 2-thio-6-oxo-1,6-dihydropyrimidines as inhibitors of human lactate dehydrogenase.
Bioorg.Med.Chem.Lett., 23, 2013
4JIJ
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BU of 4jij by Molmil
Crystal structure of an inactive mutant of MMP-9 catalytic domain in complex with a fluorogenic synthetic peptidic substrate
Descriptor: 1,2-ETHANEDIOL, AZIDE ION, CALCIUM ION, ...
Authors:Stura, E.A, Vera, L, Cassar-Lajeunesse, E, Tranchant, I, Amoura, M, Dive, V.
Deposit date:2013-03-06
Release date:2014-03-12
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.698 Å)
Cite:Halogen Bonding Controls Selectivity of FRET Substrate Probes for MMP-9.
Chem.Biol., 21, 2014
4JOQ
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BU of 4joq by Molmil
Putative ribose ABC transporter, periplasmic solute-binding protein from Rhodobacter sphaeroides
Descriptor: 1,2-ETHANEDIOL, ABC ribose transporter, periplasmic solute-binding protein, ...
Authors:Osipiuk, J, Tesar, C, Endres, M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2013-03-18
Release date:2013-04-10
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Putative ribose ABC transporter, periplasmic solute-binding protein from Rhodobacter sphaeroides.
To be Published
5OXW
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BU of 5oxw by Molmil
Structure of NeqN from Nanoarchaeum equitans
Descriptor: ALA-SER-GLY-SER-PHE-LYS-VAL-ILE-TYR-GLY-ASP, NEQ068
Authors:Aparicio, D, Perez-Luque, R, Ribo, M, Fita, I.
Deposit date:2017-09-07
Release date:2018-10-10
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Structural Insights into Subunits Assembly and the Oxyester Splicing Mechanism of Neq pol Split Intein.
Cell Chem Biol, 25, 2018
4NEL
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BU of 4nel by Molmil
Crystal structure of a putative transcriptional regulator from Saccharomonospora viridis in complex with N,N-dimethylmethanamine
Descriptor: N,N-dimethylmethanamine, Transcriptional regulator
Authors:Halavaty, A.S, Filippova, E.V, Minasov, G, Kiryukhina, O, Shuvalova, L, Endres, M, Joachimiak, A, Anderson, W.F, Midwest Center for Structural Genomics (MCSG)
Deposit date:2013-10-29
Release date:2013-12-04
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal structure of a putative transcriptional regulator from Saccharomonospora viridis in complex with N,N-dimethylmethanamine
To be Published
4JIU
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BU of 4jiu by Molmil
Crystal structure of the metallopeptidase zymogen of Pyrococcus abyssi abylysin
Descriptor: GLYCEROL, Proabylysin, ZINC ION
Authors:Lopez-Pelegrin, M, Cerda-Costa, N, Martinez-Jimenez, F, Cintas-Pedrola, A, Canals, A, Peinado, J.R, Marti-Renom, M.A, Lopez-Otin, C, Arolas, J.L, Gomis-Ruth, F.X.
Deposit date:2013-03-07
Release date:2013-06-12
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:A novel family of soluble minimal scaffolds provides structural insight into the catalytic domains of integral membrane metallopeptidases
J.Biol.Chem., 288, 2013
3OZD
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BU of 3ozd by Molmil
Crystal Structure of human 5'-deoxy-5'-methyladenosine phosphorylase in complex with pCl-phenylthioDADMeImmA
Descriptor: (3R,4S)-1-[(4-amino-5H-pyrrolo[3,2-d]pyrimidin-7-yl)methyl]-4-{[(4-chlorophenyl)sulfanyl]methyl}pyrrolidin-3-ol, S-methyl-5'-thioadenosine phosphorylase
Authors:Ho, M, Guan, R, Almo, S.C, Schramm, V.L.
Deposit date:2010-09-24
Release date:2011-09-28
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure of human 5'-deoxy-5'-methyladenosine phosphorylase
to be published
6G10
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BU of 6g10 by Molmil
Complex of rice blast (Magnaporthe oryzae) effector protein AVR-PikD with the HMA domain of Pikp-1 from rice (Oryza sativa)
Descriptor: AVR-Pik protein, CHLORIDE ION, Resistance protein Pikp-1
Authors:De la Concepcion, J.C, Franceschetti, M, Banfield, M.J.
Deposit date:2018-03-20
Release date:2018-06-13
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Polymorphic residues in rice NLRs expand binding and response to effectors of the blast pathogen.
Nat Plants, 4, 2018
4JQI
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BU of 4jqi by Molmil
Structure of active beta-arrestin1 bound to a G protein-coupled receptor phosphopeptide
Descriptor: 1,2-ETHANEDIOL, Beta-arrestin-1, CHLORIDE ION, ...
Authors:Shukla, A.K, Manglik, A, Kruse, A.C, Xiao, K, Reis, R.I, Tseng, W.C, Staus, D.P, Hilger, D, Uysal, S, Huang, L.H, Paduch, M, Shukla, P.T, Koide, A, Koide, S, Weis, W.I, Kossiakoff, A.A, Kobilka, B.K, Lefkowitz, R.J.
Deposit date:2013-03-20
Release date:2013-04-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of active beta-arrestin-1 bound to a G-protein-coupled receptor phosphopeptide.
Nature, 497, 2013
6JHD
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BU of 6jhd by Molmil
Solution structure of IFN alpha8
Descriptor: Interferon alpha-8
Authors:Ken-ichi, A, Shigeyuki, M.
Deposit date:2019-02-18
Release date:2020-02-19
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Determination of solution structure of interferon alpha8: Novel insights into the preferred interaction with IFNAR2 among its subtypes
To Be Published
6RBR
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BU of 6rbr by Molmil
Crystal structure of NAD kinase 1 from Listeria monocytogenes in complexe with an adenine derivative
Descriptor: 8-bromanyl-9-ethyl-purin-6-amine, CITRIC ACID, NAD kinase 1
Authors:Gelin, M, Labesse, G.
Deposit date:2019-04-11
Release date:2020-02-19
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:From Substrate to Fragments to Inhibitor ActiveIn VivoagainstStaphylococcus aureus.
Acs Infect Dis., 6, 2020
6RC2
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BU of 6rc2 by Molmil
Crystal structure of NAD kinase 1 from Listeria monocytogenes in complexe with an adenine derivative
Descriptor: 8-methyl-9-pent-4-ynyl-purin-6-amine, CITRIC ACID, NAD kinase 1
Authors:Gelin, M, Labesse, G.
Deposit date:2019-04-11
Release date:2020-02-19
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.048 Å)
Cite:From Substrate to Fragments to Inhibitor ActiveIn VivoagainstStaphylococcus aureus.
Acs Infect Dis., 6, 2020
4NHW
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BU of 4nhw by Molmil
Crystal structure of glutathione transferase SMc00097 from Sinorhizobium meliloti, target EFI-507275, with one glutathione bound per one protein subunit
Descriptor: GLUTATHIONE, Glutathione S-transferase
Authors:Patskovsky, Y, Toro, R, Bhosle, R, Hillerich, B, Seidel, R.D, Washington, E, Scott Glenn, A, Chowdhury, S, Evans, B, Hammonds, J, Imker, H.J, Al Obaidi, N, Stead, M, Love, J, Gerlt, J.A, Armstrong, R.N, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2013-11-05
Release date:2013-11-20
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of glutathione transferase SMc00097 from Sinorhizobium meliloti, target EFI-507275
To be Published

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PDB entries from 2024-10-09

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