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PDB: 51689 results

8FXJ
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BU of 8fxj by Molmil
Crystal structure of Fab460
Descriptor: ACETATE ION, CHLORIDE ION, Fab460, ...
Authors:Tan, K, Kim, M, Reinherz, E.L.
Deposit date:2023-01-24
Release date:2023-10-11
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Inadequate structural constraint on Fab approach rather than paratope elicitation limits HIV-1 MPER vaccine utility.
Nat Commun, 14, 2023
5AK9
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BU of 5ak9 by Molmil
THE CRYSTAL STRUCTURE OF I-DMOI Q42AK120M IN COMPLEX WITH ITS TARGET DNA IN THE PRESENCE OF 2MM MN
Descriptor: 25MER, 5'-D(*GP*CP*CP*TP*TP*GP*CP*CP*GP*GP*GP*TP*AP*AP)-3', 5'-D(*GP*TP*TP*CP*CP*GP*GP*CP*GP*CP*GP)-3, ...
Authors:Molina, R, Marcaida, M.J, Redondo, P, Marenchino, M, D'Abramo, M, Montoya, G, Prieto, J.
Deposit date:2015-03-02
Release date:2015-06-17
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.601 Å)
Cite:Engineering a Nickase on the Homing Endonuclease I-Dmoi Scaffold.
J.Biol.Chem., 290, 2015
6EUB
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BU of 6eub by Molmil
The fibrinogen-like domain of human Angptl4
Descriptor: Angiopoietin-related protein 4, PENTAETHYLENE GLYCOL
Authors:Biterova, E.I, Esmaeeli, M, Alanen, H.I, Saaranen, M, Ruddock, L.W.
Deposit date:2017-10-30
Release date:2018-05-09
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structures of Angptl3 and Angptl4, modulators of triglyceride levels and coronary artery disease.
Sci Rep, 8, 2018
5AKM
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BU of 5akm by Molmil
THE CRYSTAL STRUCTURE OF I-DMOI G20S IN COMPLEX WITH ITS TARGET DNA IN THE PRESENCE OF 2MM MG
Descriptor: 5'-D(*CP*CP*GP*GP*CP*AP*AP*GP*GP*CP)-3', 5'-D(*CP*GP*CP*GP*CP*CP*GP*GP*AP*AP*CP*TP*TP*AP*CP)-3', 5'-D(*GP*CP*CP*TP*TP*GP*CP*CP*GP*GP*GP*TP*AP*AP)-3', ...
Authors:Molina, R, Marcaida, M.J, Redondo, P, Marenchino, M, D'Abramo, M, Montoya, G, Prieto, J.
Deposit date:2015-03-04
Release date:2015-06-17
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Engineering a Nickase on the Homing Endonuclease I-Dmoi Scaffold.
J.Biol.Chem., 290, 2015
6HYE
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BU of 6hye by Molmil
PDX1.2/PDX1.3 complex (PDX1.3:K97A)
Descriptor: Pyridoxal 5'-phosphate synthase subunit PDX1.3, Pyridoxal 5'-phosphate synthase-like subunit PDX1.2, SULFATE ION
Authors:Robinson, G.C, Kaufmann, M, Roux, C, Martinez-Font, J, Hothorn, M, Thore, S, Fitzpatrick, T.B.
Deposit date:2018-10-20
Release date:2019-04-24
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.53 Å)
Cite:Crystal structure of the pseudoenzyme PDX1.2 in complex with its cognate enzyme PDX1.3: a total eclipse.
Acta Crystallogr D Struct Biol, 75, 2019
5MNU
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BU of 5mnu by Molmil
OXA-10 Avibactam complex with bound bromide
Descriptor: (2S,5R)-1-formyl-5-[(sulfooxy)amino]piperidine-2-carboxamide, BROMIDE ION, Beta-lactamase OXA-10, ...
Authors:Brem, J, McDonough, M, Clifton, I.
Deposit date:2016-12-13
Release date:2017-07-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:(13)C-Carbamylation as a mechanistic probe for the inhibition of class D beta-lactamases by avibactam and halide ions.
Org. Biomol. Chem., 15, 2017
3MF1
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BU of 3mf1 by Molmil
Crystal structure of class II aaRS homologue (Bll0957) complexed with an analogue of glycyl adenylate
Descriptor: 5'-O-(glycylsulfamoyl)adenosine, Bll0957 protein, ZINC ION
Authors:Weygand-Durasevic, I, Mocibob, M, Ivic, N, Bilokapic, S, Maier, T, Luic, M, Ban, N.
Deposit date:2010-04-01
Release date:2010-07-28
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Homologs of aminoacyl-tRNA synthetases acylate carrier proteins and provide a link between ribosomal and nonribosomal peptide synthesis
Proc.Natl.Acad.Sci.USA, 107, 2010
8FAJ
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BU of 8faj by Molmil
OXA-48-NA-1-157 inhibitor complex
Descriptor: (5R)-3-{[(3S,5S)-5-(dimethylcarbamoyl)pyrrolidin-3-yl]sulfanyl}-5-[(2S,3R)-3-hydroxy-1-oxobutan-2-yl]-5-methyl-4,5-dihydro-1H-pyrrole-2-carboxylic acid, Beta-lactamase, CADMIUM ION, ...
Authors:Smith, C.A, Stewart, N.K, Toth, M, Vakulenko, S.B.
Deposit date:2022-11-28
Release date:2023-10-11
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:The C5 alpha-Methyl-Substituted Carbapenem NA-1-157 Exhibits Potent Activity against Klebsiella spp. Isolates Producing OXA-48-Type Carbapenemases.
Acs Infect Dis., 9, 2023
8FZ2
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BU of 8fz2 by Molmil
Crystal structure of Fab460 in complex with MPER peptide
Descriptor: Fab460, H chain, L chain, ...
Authors:Tan, K, Kim, M, Reinherz, E.L.
Deposit date:2023-01-27
Release date:2023-10-11
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Inadequate structural constraint on Fab approach rather than paratope elicitation limits HIV-1 MPER vaccine utility.
Nat Commun, 14, 2023
7EV3
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BU of 7ev3 by Molmil
Crystal structure of Mycobacterium tuberculosis tryptophanyl-tRNA synthetase complexed with Y-10 and ATP
Descriptor: (5S)-5-[(1R)-1-(4-fluoranyl-1H-indol-3-yl)ethyl]-2-(methylamino)-1,3-oxazol-4-one, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Xu, M, Chen, S.
Deposit date:2021-05-20
Release date:2022-02-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Investigate Natural Product Indolmycin and the Synthetically Improved Analogue Toward Antimycobacterial Agents.
Acs Chem.Biol., 17, 2022
3MH1
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BU of 3mh1 by Molmil
Mutagenesis of p38 MAP kinase establishes key roles of Phe169 in function and structural dynamics and reveals a novel DFG-out state
Descriptor: Mitogen-activated protein kinase 14, octyl beta-D-glucopyranoside
Authors:Namboodiri, H.V, Karpusas, M, Bukhtiyarova, M, Springman, E.B.
Deposit date:2010-04-07
Release date:2010-04-21
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Mutagenesis of p38alpha MAP kinase establishes key roles of Phe169 in function and structural dynamics and reveals a novel DFG-OUT state.
Biochemistry, 46, 2007
7EV2
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BU of 7ev2 by Molmil
Crystal structure of Mycobacterium tuberculosis tryptophanyl-tRNA synthetase complexed with Y-11 and ATP
Descriptor: (5S)-5-[(1R)-1-(4-chloranyl-1H-indol-3-yl)ethyl]-2-(methylamino)-1,3-oxazol-4-one, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Xu, M, Chen, S.
Deposit date:2021-05-20
Release date:2022-02-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Investigate Natural Product Indolmycin and the Synthetically Improved Analogue Toward Antimycobacterial Agents.
Acs Chem.Biol., 17, 2022
6SR0
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BU of 6sr0 by Molmil
X-ray pump X-ray probe on lysozyme.Gd nanocrystals: single colour reference data
Descriptor: 10-((2R)-2-HYDROXYPROPYL)-1,4,7,10-TETRAAZACYCLODODECANE 1,4,7-TRIACETIC ACID, CHLORIDE ION, GADOLINIUM ATOM, ...
Authors:Kloos, M, Gorel, A, Nass, K.
Deposit date:2019-09-04
Release date:2020-04-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural dynamics in proteins induced by and probed with X-ray free-electron laser pulses.
Nat Commun, 11, 2020
3MJP
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BU of 3mjp by Molmil
Crystal structure determination of Japanese quail (Coturnix coturnix japonica) hemoglobin at 2.76 Angstrom resolution
Descriptor: Hemoglobin subunit alpha-A, Hemoglobin subunit beta, OXYGEN MOLECULE, ...
Authors:Thenmozhi, M, Sathya Moorthy, P, Balasubramanian, M, Ponnuswamy, M.N.
Deposit date:2010-04-13
Release date:2010-12-08
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.76 Å)
Cite:Crystal structure determination of Japanese quail (Coturnix coturnix japonica) hemoglobin at 2.76 Angstrom resolution
To be Published
6SR8
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BU of 6sr8 by Molmil
Crystal structure of glutathione transferase Omega 2C from Trametes versicolor
Descriptor: GLUTATHIONE, Uncharacterized protein
Authors:Schwartz, M, Favier, F, Didierjean, C.
Deposit date:2019-09-05
Release date:2020-09-30
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Diversity of Omega Glutathione Transferases in mushroom-forming fungi revealed by phylogenetic, transcriptomic, biochemical and structural approaches.
Fungal Genet Biol., 148, 2021
1KZ1
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BU of 1kz1 by Molmil
Mutant enzyme W27G Lumazine Synthase from S.pombe
Descriptor: 6,7-Dimethyl-8-ribityllumazine Synthase
Authors:Gerhardt, S, Haase, I, Steinbacher, S, Kaiser, J.T, Cushman, M, Bacher, A, Huber, R, Fischer, M.
Deposit date:2002-02-06
Release date:2002-07-24
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:The structural basis of riboflavin binding to Schizosaccharomyces pombe 6,7-dimethyl-8-ribityllumazine synthase.
J.Mol.Biol., 318, 2002
6SRO
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BU of 6sro by Molmil
X-ray pump X-ray probe on thaumatin nanocrystals: 76 fs time delay
Descriptor: L(+)-TARTARIC ACID, Thaumatin-1
Authors:Kloos, M, Gorel, A, Nass, K.
Deposit date:2019-09-05
Release date:2020-04-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural dynamics in proteins induced by and probed with X-ray free-electron laser pulses.
Nat Commun, 11, 2020
6SR2
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BU of 6sr2 by Molmil
X-ray pump X-ray probe on lysozyme.Gd nanocrystals: 37 fs time delay
Descriptor: 10-((2R)-2-HYDROXYPROPYL)-1,4,7,10-TETRAAZACYCLODODECANE 1,4,7-TRIACETIC ACID, CHLORIDE ION, GADOLINIUM ATOM, ...
Authors:Kloos, M, Gorel, A, Nass, K.
Deposit date:2019-09-04
Release date:2020-04-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural dynamics in proteins induced by and probed with X-ray free-electron laser pulses.
Nat Commun, 11, 2020
7ZZ5
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BU of 7zz5 by Molmil
Cryo-EM structure of "BC open" conformation of Lactococcus lactis pyruvate carboxylase with acetyl-CoA
Descriptor: ACETYL COENZYME *A, BICARBONATE ION, Pyruvate carboxylase
Authors:Lopez-Alonso, J.P, Lazaro, M, Gil, D, Choi, P.H, Tong, L, Valle, M.
Deposit date:2022-05-25
Release date:2022-10-12
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (2.43 Å)
Cite:CryoEM structural exploration of catalytically active enzyme pyruvate carboxylase.
Nat Commun, 13, 2022
8FU3
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BU of 8fu3 by Molmil
Structure Of Respiratory Syncytial Virus Polymerase with Novel Non-Nucleoside Inhibitor
Descriptor: 8-methoxy-3-methyl-N-{(2S)-3,3,3-trifluoro-2-[5-fluoro-6-(4-fluorophenyl)-4-(2-hydroxypropan-2-yl)pyridin-2-yl]-2-hydroxypropyl}cinnoline-6-carboxamide, Phosphoprotein, RNA-directed RNA polymerase L
Authors:Yu, X, Abeywickrema, P, Bonneux, B, Behera, I, Jacoby, E, Fung, A, Adhikary, S, Bhaumik, A, Carbajo, R.J, Bruyn, S.D, Miller, R, Patrick, A, Pham, Q, Piassek, M, Verheyen, N, Shareef, A, Sutto-Ortiz, P, Ysebaert, N, Vlijmen, H.V, Jonckers, T.H.M, Herschke, F, McLellan, J.S, Decroly, E, Fearns, R, Grosse, S, Roymans, D, Sharma, S, Rigaux, P, Jin, Z.
Deposit date:2023-01-16
Release date:2023-11-01
Method:ELECTRON MICROSCOPY (2.88 Å)
Cite:Structural and mechanistic insights into the inhibition of respiratory syncytial virus polymerase by a non-nucleoside inhibitor.
Commun Biol, 6, 2023
7ZZ3
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BU of 7zz3 by Molmil
Cryo-EM structure of "BC react" conformation of Lactococcus lactis pyruvate carboxylase with acetyl-CoA
Descriptor: ACETYL COENZYME *A, ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ...
Authors:Lopez-Alonso, J.P, Lazaro, M, Gil, D, Choi, P.H, Tong, L, Valle, M.
Deposit date:2022-05-25
Release date:2022-10-12
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (2.41 Å)
Cite:CryoEM structural exploration of catalytically active enzyme pyruvate carboxylase.
Nat Commun, 13, 2022
7ZYZ
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BU of 7zyz by Molmil
Cryo-EM structure of "CT oxa" conformation of Lactococcus lactis pyruvate carboxylase with acetyl-CoA
Descriptor: MANGANESE (II) ION, OXALOACETATE ION, Pyruvate carboxylase
Authors:Lopez-Alonso, J.P, Lazaro, M, Gil, D, Choi, P.H, Tong, L, Valle, M.
Deposit date:2022-05-25
Release date:2022-10-12
Last modified:2022-11-02
Method:ELECTRON MICROSCOPY (2.47 Å)
Cite:CryoEM structural exploration of catalytically active enzyme pyruvate carboxylase.
Nat Commun, 13, 2022
7JOE
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BU of 7joe by Molmil
Crystal structure of BbKI complexed with Human Kallikrein 4
Descriptor: Kallikrein 4 (Prostase, enamel matrix, prostate), ...
Authors:Li, M, Wlodawer, A, Gustchina, A.
Deposit date:2020-08-06
Release date:2021-07-21
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural studies of complexes of kallikrein 4 with wild-type and mutated forms of the Kunitz-type inhibitor BbKI
Acta Crystallogr.,Sect.D, 77, 2021
3MNE
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BU of 3mne by Molmil
Crystal structure of the agonist form of mouse glucocorticoid receptor stabilized by F608S mutation at 1.96A
Descriptor: DEXAMETHASONE, GLYCEROL, Glucocorticoid receptor, ...
Authors:Schoch, G.A, Seitz, T, Benz, J, Banner, D, Stihle, M, D'Arcy, B, Thoma, R, Sterner, R, Hennig, M, Ruf, A.
Deposit date:2010-04-21
Release date:2010-09-15
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Enhancing the stability and solubility of the glucocorticoid receptor ligand-binding domain by high-throughput library screening.
J.Mol.Biol., 403, 2010
7JOD
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BU of 7jod by Molmil
Crytsal structure of BbKI complexed with Human Kallikrein 4
Descriptor: CADMIUM ION, CHLORIDE ION, Kallikrein 4 (Prostase, ...
Authors:Li, M, Wlodawer, A, Gustchina, A.
Deposit date:2020-08-06
Release date:2021-07-21
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.33 Å)
Cite:Structural studies of complexes of kallikrein 4 with wild-type and mutated forms of the Kunitz-type inhibitor BbKI
Acta Crystallogr.,Sect.D, 77, 2021

224572

數據於2024-09-04公開中

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