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PDB: 52230 results

3P2N
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Discovery and structural characterization of a new glycoside hydrolase family abundant in coastal waters that was annotated as 'hypothetical protein'
Descriptor: 3,6-anhydro-alpha-L-galactosidase, CHLORIDE ION, ZINC ION
Authors:Rebuffet, E, Barbeyron, T, Czjzek, M, Michel, G.
Deposit date:2010-10-03
Release date:2011-03-02
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Discovery and structural characterization of a novel glycosidase family of marine origin.
Environ Microbiol, 13, 2011
6J5I
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Cryo-EM structure of the mammalian DP-state ATP synthase
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase F1 subunit epsilon, ...
Authors:Gu, J, Zhang, L, Yi, J, Yang, M.
Deposit date:2019-01-11
Release date:2019-06-26
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.34 Å)
Cite:Cryo-EM structure of the mammalian ATP synthase tetramer bound with inhibitory protein IF1.
Science, 364, 2019
3OVW
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ENDOGLUCANASE I NATIVE STRUCTURE
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ENDOGLUCANASE I
Authors:Davies, G.J, Schulein, M.
Deposit date:1997-10-06
Release date:1998-04-08
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of the endoglucanase I from Fusarium oxysporum: native, cellobiose, and 3,4-epoxybutyl beta-D-cellobioside-inhibited forms, at 2.3 A resolution.
Biochemistry, 36, 1997
6J7O
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Crystal structure of toxin TglT (unusual type guanylyltransferase-like toxin, Rv1045) mutant E146Q from Mycobacterium tuberculosis
Descriptor: MAGNESIUM ION, guanylyltransferase-like toxin
Authors:Yu, X, Gao, X, Zhu, K, Wojdyla, J.A, Wang, M, Cui, S.
Deposit date:2019-01-18
Release date:2020-05-13
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Characterization of a toxin-antitoxin system in Mycobacterium tuberculosis suggests neutralization by phosphorylation as the antitoxicity mechanism.
Commun Biol, 3, 2020
7AXO
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Structure of SARS-CoV-2 Main Protease bound to AR-42.
Descriptor: 3C-like proteinase, AR-42, DIMETHYL SULFOXIDE
Authors:Ewert, W, Guenther, S, Reinke, P, Oberthuer, D, Yefanov, O, Gelisio, L, Ginn, H, Lieske, J, Domaracky, M, Brehm, W, Rahmani Mashour, A, White, T.A, Knoska, J, Pena Esperanza, G, Koua, F, Tolstikova, A, Groessler, M, Fischer, P, Hennicke, V, Fleckenstein, H, Trost, F, Galchenkova, M, Gevorkov, Y, Li, C, Awel, S, Paulraj, L.X, Ullah, N, Falke, S, Alves Franca, B, Schwinzer, M, Brognaro, H, Werner, N, Perbandt, M, Tidow, H, Seychell, B, Beck, T, Meier, S, Doyle, J.J, Giseler, H, Melo, D, Dunkel, I, Lane, T.J, Peck, A, Saouane, S, Hakanpaeae, J, Meyer, J, Noei, H, Gribbon, P, Ellinger, B, Kuzikov, M, Wolf, M, Zhang, L, Ehrt, C, Pletzer-Zelgert, J, Wollenhaupt, J, Feiler, C, Weiss, M, Schulz, E.C, Mehrabi, P, Norton-Baker, B, Schmidt, C, Lorenzen, K, Schubert, R, Han, H, Chari, A, Fernandez Garcia, Y, Turk, D, Hilgenfeld, R, Rarey, M, Zaliani, A, Chapman, H.N, Pearson, A, Betzel, C, Meents, A.
Deposit date:2020-11-10
Release date:2020-12-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:X-ray screening identifies active site and allosteric inhibitors of SARS-CoV-2 main protease.
Science, 372, 2021
6J7T
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Crystal structure of toxin TglT (unusual type guanylyltransferase-like toxin, Rv1045) mutant D82A from Mycobacterium tuberculosis
Descriptor: GLYCEROL, MAGNESIUM ION, guanylyltransferase-like toxin
Authors:Yu, X, Gao, X, Zhu, K, Wojdyla, J.A, Wang, M, Cui, S.
Deposit date:2019-01-18
Release date:2020-05-13
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.903 Å)
Cite:Characterization of a toxin-antitoxin system in Mycobacterium tuberculosis suggests neutralization by phosphorylation as the antitoxicity mechanism.
Commun Biol, 3, 2020
6IZ3
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Structural basis for activity of TRIC counter-ion channels in calcium release
Descriptor: Trimeric intracellular cation channel type B-B
Authors:Zeng, Y, Wang, X.H, Su, M, Chen, Y.H.
Deposit date:2018-12-18
Release date:2019-05-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.791 Å)
Cite:Structural basis for activity of TRIC counter-ion channels in calcium release.
Proc.Natl.Acad.Sci.USA, 116, 2019
6J82
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Crystal structure of TleB apo
Descriptor: Cytochrome P-450, PROTOPORPHYRIN IX CONTAINING FE
Authors:Alblova, M, Nakamura, H, Mori, T, Abe, I.
Deposit date:2019-01-18
Release date:2019-08-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.202 Å)
Cite:Molecular basis for the P450-catalyzed C-N bond formation in indolactam biosynthesis.
Nat.Chem.Biol., 15, 2019
3P5T
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CFIm25-CFIm68 complex
Descriptor: Cleavage and polyadenylation specificity factor subunit 5, Cleavage and polyadenylation specificity factor subunit 6
Authors:Li, H, Tong, S, Li, X, Shi, H, Gao, Y, Ge, H, Niu, L, Teng, M.
Deposit date:2010-10-11
Release date:2010-11-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural basis of pre-mRNA recognition by the human cleavage factor Im complex
To be Published
3P09
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BU of 3p09 by Molmil
Crystal Structure of Beta-Lactamase from Francisella tularensis
Descriptor: Beta-lactamase, GLYCEROL, SULFATE ION
Authors:Kim, Y, Makowska-Grzyska, M, Hasseman, J, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2010-09-27
Release date:2010-10-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.898 Å)
Cite:Crystal Structure of Beta-Lactamase from Francisella tularensis
To be Published
6J9W
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BU of 6j9w by Molmil
Crystal structure of ABC transporter alpha-glycoside-binding protein in complex with trehalose
Descriptor: 1,2-ETHANEDIOL, ABC transporter, periplasmic substrate-binding protein, ...
Authors:Kanaujia, S.P, Chandravanshi, M, Gogoi, P.
Deposit date:2019-01-24
Release date:2019-10-30
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural and thermodynamic correlation illuminates the selective transport mechanism of disaccharide alpha-glycosides through ABC transporter.
Febs J., 287, 2020
3P7V
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BU of 3p7v by Molmil
Radiation damage study of thermolysin - 160K structure C (4.8 MGy)
Descriptor: CALCIUM ION, Thermolysin, ZINC ION
Authors:Juers, D.H, Weik, M.
Deposit date:2010-10-12
Release date:2010-12-08
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Radiation damage study of thermolysin - 160K structure C (4.8 MGy)
To be Published
6JAD
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BU of 6jad by Molmil
Crystal structure of ABC transporter alpha-glycoside-binding protein in complex with palatinose
Descriptor: ABC transporter, periplasmic substrate-binding protein, CITRIC ACID, ...
Authors:Kanaujia, S.P, Chandravanshi, M, Gogoi, P.
Deposit date:2019-01-24
Release date:2019-10-30
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural and thermodynamic correlation illuminates the selective transport mechanism of disaccharide alpha-glycosides through ABC transporter.
Febs J., 287, 2020
7AOL
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BU of 7aol by Molmil
Structure of SARS-CoV-2 Main Protease bound to Climbazole
Descriptor: (1~{S})-1-(4-chloranylphenoxy)-1-imidazol-1-yl-3,3-dimethyl-butan-2-one, 3C-like proteinase, DIMETHYL SULFOXIDE, ...
Authors:Guenther, S, Reinke, P, Oberthuer, D, Yefanov, O, Gelisio, L, Ginn, H, Lieske, J, Domaracky, M, Brehm, W, Rahmani Mashour, A, White, T.A, Knoska, J, Pena Esperanza, G, Koua, F, Tolstikova, A, Groessler, M, Fischer, P, Hennicke, V, Fleckenstein, H, Trost, F, Galchenkova, M, Gevorkov, Y, Li, C, Awel, S, Paulraj, L.X, Ullah, N, Falke, S, Alves Franca, B, Schwinzer, M, Brognaro, H, Werner, N, Perbandt, M, Tidow, H, Seychell, B, Beck, T, Meier, S, Doyle, J.J, Giseler, H, Melo, D, Dunkel, I, Lane, T.J, Peck, A, Saouane, S, Hakanpaeae, J, Meyer, J, Noei, H, Gribbon, P, Ellinger, B, Kuzikov, M, Wolf, M, Zhang, L, Ehrt, C, Pletzer-Zelgert, J, Wollenhaupt, J, Feiler, C, Weiss, M, Schulz, E.C, Mehrabi, P, Norton-Baker, B, Schmidt, C, Lorenzen, K, Schubert, R, Han, H, Chari, A, Fernandez Garcia, Y, Turk, D, Hilgenfeld, R, Rarey, M, Zaliani, A, Chapman, H.N, Pearson, A, Betzel, C, Meents, A.
Deposit date:2020-10-14
Release date:2020-12-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:X-ray screening identifies active site and allosteric inhibitors of SARS-CoV-2 main protease.
Science, 372, 2021
3P1A
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BU of 3p1a by Molmil
Structure of human Membrane-associated Tyrosine- and Threonine-specific cdc2-inhibitory kinase MYT1 (PKMYT1)
Descriptor: 1,2-ETHANEDIOL, DIMETHYL SULFOXIDE, Membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase
Authors:Chaikuad, A, Eswaran, J, Fedorov, O, Cooper, C.D.O, Kroeler, T, Vollmar, M, Krojer, T, Berridge, G, Muniz, J.R.C, Pike, A.C.W, von Delft, F, Weigelt, J, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2010-09-30
Release date:2010-11-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of human Membrane-associated Tyrosine- and Threonine-specific cdc2-inhibitory kinase MYT1 (PKMYT1)
To be Published
3P1L
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BU of 3p1l by Molmil
Crystal structure of Escherichia coli BamB, a lipoprotein component of the beta-barrel assembly machinery complex, native crystals.
Descriptor: Lipoprotein yfgL, SODIUM ION
Authors:Kim, K.H, Paetzel, M.
Deposit date:2010-09-30
Release date:2010-12-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of Escherichia coli BamB, a lipoprotein component of the beta-barrel assembly machinery complex, native crystals
J.Mol.Biol., 406, 2011
6JB1
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BU of 6jb1 by Molmil
Structure of pancreatic ATP-sensitive potassium channel bound with repaglinide and ATPgammaS at 3.3A resolution
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, ATP-binding cassette sub-family C member 8 isoform X2, ATP-sensitive inward rectifier potassium channel 11, ...
Authors:Chen, L, Ding, D, Wang, M, Wu, J.-X, Kang, Y.
Deposit date:2019-01-25
Release date:2019-05-22
Last modified:2021-09-29
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:The Structural Basis for the Binding of Repaglinide to the Pancreatic KATPChannel.
Cell Rep, 27, 2019
3P2J
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Crystal structure of peptidyl-tRNA hydrolase from Mycobacterium smegmatis at 2.2 A resolution
Descriptor: Peptidyl-tRNA hydrolase
Authors:Kumar, A, Singh, A, Yadav, R, Sinha, M, Arora, A, Sharma, S, Singh, T.P.
Deposit date:2010-10-02
Release date:2010-11-17
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Crystal Structure of peptidyl-tRNA hydrolase from Mycobacterium smegmatis at 2.2 A resolution
To be Published
3P2R
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BU of 3p2r by Molmil
Crystal structure of the fluoroacetyl-CoA-specific thioesterase FlK in complex with fluoroacetate
Descriptor: Fluoroacetyl coenzyme A thioesterase, fluoroacetic acid
Authors:Weeks, A.M, Coyle, S.M, Jinek, M, Doudna, J.A, Chang, M.C.Y.
Deposit date:2010-10-03
Release date:2010-10-20
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Structural and biochemical studies of a fluoroacetyl-CoA-specific thioesterase reveal a molecular basis for fluorine selectivity.
Biochemistry, 49, 2010
6J50
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BU of 6j50 by Molmil
RNA polymerase II elongation complex bound with Spt4/5 and foreign DNA, stalled at SHL(-1) of the nucleosome (tilted conformation)
Descriptor: DNA (198-MER), DNA (41-MER), DNA-directed RNA polymerase subunit, ...
Authors:Ehara, H, Kujirai, T, Fujino, Y, Shirouzu, M, Kurumizaka, H, Sekine, S.
Deposit date:2019-01-10
Release date:2019-02-20
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (4.7 Å)
Cite:Structural insight into nucleosome transcription by RNA polymerase II with elongation factors.
Science, 363, 2019
6IXH
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BU of 6ixh by Molmil
Type VI secretion system membrane core complex
Descriptor: Type VI Secretion System TssJ, Type VI Secretion System TssM
Authors:Yin, M, Yan, Z.
Deposit date:2018-12-10
Release date:2019-01-23
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Architecture of type VI secretion system membrane core complex.
Cell Res., 29, 2019
3P5P
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BU of 3p5p by Molmil
Crystal Structure of Taxadiene Synthase from Pacific Yew (Taxus brevifolia) in complex with Mg2+ and 13-aza-13,14-dihydrocopalyl diphosphate
Descriptor: 1,2-ETHANEDIOL, 2-(methyl{2-[(1S,4aS,8aS)-5,5,8a-trimethyl-2-methylidenedecahydronaphthalen-1-yl]ethyl}amino)ethyl trihydrogen diphosphate, MAGNESIUM ION, ...
Authors:Koksal, M, Christianson, D.W.
Deposit date:2010-10-10
Release date:2010-12-29
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.816 Å)
Cite:Taxadiene synthase structure and evolution of modular architecture in terpene biosynthesis.
Nature, 469, 2011
6J20
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Crystal structure of the human NK1 substance P receptor
Descriptor: 5-[[(2~{R},3~{S})-2-[(1~{R})-1-[3,5-bis(trifluoromethyl)phenyl]ethoxy]-3-(4-fluorophenyl)morpholin-4-yl]methyl]-1,2-dihydro-1,2,4-triazol-3-one, Substance-P receptor,Endolysin
Authors:Chen, S, Lu, M, Zhang, H, Wu, B, Zhao, Q.
Deposit date:2018-12-30
Release date:2019-03-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Human substance P receptor binding mode of the antagonist drug aprepitant by NMR and crystallography.
Nat Commun, 10, 2019
3PA9
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Mechanism of inactivation of E. coli aspartate aminotransferase by (S)-4-amino-4,5-dihydro-2-furancarboxylic acid (S-ADFA) pH 7.5
Descriptor: 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, 4-aminofuran-2-carboxylic acid, Aspartate aminotransferase, ...
Authors:Liu, D, Pozharski, E, Fu, M, Silverman, R.B, Ringe, D.
Deposit date:2010-10-19
Release date:2010-12-01
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Mechanism of inactivation of Escherichia coli aspartate aminotransferase by (S)-4-amino-4,5-dihydro-2-furancarboxylic acid .
Biochemistry, 49, 2010
6J3G
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BU of 6j3g by Molmil
Crystal structure of an apo form of the glutathione S-transferase, CsGST83044, of Ceriporiopsis subvermispora
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, Glutathione S-transferase, ...
Authors:Osman, W.H.W, Mikami, B, Saka, N, Kondo, K, Nagata, T, Katahira, M.
Deposit date:2019-01-04
Release date:2019-05-15
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Identification of key residues for activities of atypical glutathione S-transferase of Ceriporiopsis subvermispora, a selective degrader of lignin in woody biomass, by crystallography and functional mutagenesis.
Int.J.Biol.Macromol., 132, 2019

227111

數據於2024-11-06公開中

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