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PDB: 52230 results

3DUQ
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E(L212)A, D(L213)A, N(M5)D triple mutant structure of photosynthetic reaction center from Rhodobacter sphaeroides
Descriptor: BACTERIOCHLOROPHYLL A, BACTERIOPHEOPHYTIN A, CARDIOLIPIN, ...
Authors:Pokkuluri, P.R, Schiffer, M.
Deposit date:2008-07-17
Release date:2009-06-30
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural description of compensatory mutations that restore proton transfer pathways to the L212A-L213A mutant bacterial reaction center
To be Published
3DC3
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BU of 3dc3 by Molmil
Use of Carbonic Anhydrase II, IX Active-Site Mimic, for the Purpose of Screening Inhibitors for Possible Anti-Cancer Properties
Descriptor: 5-ACETAMIDO-1,3,4-THIADIAZOLE-2-SULFONAMIDE, Carbonic anhydrase 2, ZINC ION
Authors:Genis, C, Sippel, K.H, Case, N, Govindasamy, L, Agbandje-Mckenna, M, Mckenna, R.
Deposit date:2008-06-03
Release date:2009-03-03
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Design of a carbonic anhydrase IX active-site mimic to screen inhibitors for possible anticancer properties
Biochemistry, 48, 2009
3EKW
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Crystal structure of the inhibitor Atazanavir (ATV) in complex with a multi-drug resistance HIV-1 protease variant (L10I/G48V/I54V/V64I/V82A) Refer: FLAP+ in citation.
Descriptor: (3S,8S,9S,12S)-3,12-BIS(1,1-DIMETHYLETHYL)-8-HYDROXY-4,11-DIOXO-9-(PHENYLMETHYL)-6-[[4-(2-PYRIDINYL)PHENYL]METHYL]-2,5, 6,10,13-PENTAAZATETRADECANEDIOIC ACID DIMETHYL ESTER, PHOSPHATE ION, ...
Authors:Prabu-Jeyabalan, M, King, N.M, Bandaranayake, R.M.
Deposit date:2008-09-19
Release date:2009-09-01
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Extreme Entropy-Enthalpy Compensation in a Drug-Resistant Variant of HIV-1 Protease.
Acs Chem.Biol., 7, 2012
3EPX
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BU of 3epx by Molmil
Crystal structure of Trypanosoma vivax nucleoside hydrolase in complex with the inhibitor (2R,3R,4S)-2-(hydroxymethyl)-1-(quinolin-8-ylmethyl)pyrrolidin-3,4-diol
Descriptor: (2R,3R,4S)-2-(hydroxymethyl)-1-(quinolin-8-ylmethyl)pyrrolidine-3,4-diol, CALCIUM ION, GLYCEROL, ...
Authors:Versees, W, Goeminne, A, Berg, M, Vandemeulebroucke, A, Haemers, A, Augustyns, K, Steyaert, J.
Deposit date:2008-09-30
Release date:2009-03-24
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structures of T. vivax nucleoside hydrolase in complex with new potent and specific inhibitors.
Biochim.Biophys.Acta, 1794, 2009
3E3M
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Crystal structure of a LacI family transcriptional regulator from Silicibacter pomeroyi
Descriptor: Transcriptional regulator, LacI family
Authors:Bonanno, J.B, Freeman, J, Bain, K.T, Iizuka, M, Ozyurt, S, Smith, D, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-08-07
Release date:2008-08-26
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of a LacI family transcriptional regulator from Silicibacter pomeroyi
To be Published
3E47
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BU of 3e47 by Molmil
Crystal Structure of the Yeast 20S Proteasome in Complex with Homobelactosin C
Descriptor: Proteasome component C1, Proteasome component C11, Proteasome component C5, ...
Authors:Groll, M, Larionov, O.V, de Meijere, A.
Deposit date:2008-08-10
Release date:2008-09-02
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (3 Å)
Cite:Inhibitor-binding mode of homobelactosin C to proteasomes: new insights into class I MHC ligand generation
Proc.Natl.Acad.Sci.Usa, 103, 2006
3H5E
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BU of 3h5e by Molmil
LeuD_1-156 small subunit of isopropylmalate isomerase (Rv2987c) from mycobacterium tuberculosis
Descriptor: 3-isopropylmalate dehydratase small subunit
Authors:Manikandan, K, Geerlof, A, Weiss, M.S.
Deposit date:2009-04-22
Release date:2010-04-07
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural studies on the enzyme complex isopropylmalate isomerase (LeuCD) from Mycobacterium tuberculosis
Proteins, 79, 2011
3EDU
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BU of 3edu by Molmil
Crystal structure of the ankyrin-binding domain of human erythroid spectrin
Descriptor: Spectrin beta chain, erythrocyte
Authors:Simonovic, M, Stabach, P, Simonovic, I, Steitz, T.A, Morrow, J.S.
Deposit date:2008-09-03
Release date:2009-02-10
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The structure of the ankyrin-binding site of {beta}-spectrin reveals how tandem spectrin-repeats generate unique ligand-binding properties
Blood, 113, 2009
3EBB
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BU of 3ebb by Molmil
PLAP/P97 complex
Descriptor: MAGNESIUM ION, PHOSPHOLIPASE A2-ACTIVATING PROTEIN, TRANSITIONAL ENDOPLASMIC RETICULUM ATPASE (TER ATP
Authors:Walker, J.R, Qiu, L, Akutsu, M, Slessarev, Y, Amaya, M.F, Li, Y, Bountra, C, Weigelt, J, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Dhe-Paganon, S, Structural Genomics Consortium (SGC)
Deposit date:2008-08-27
Release date:2009-02-24
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure and function of the PLAA/Ufd3-p97/Cdc48 complex.
J.Biol.Chem., 285, 2010
3EUD
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Structure of the CS domain of the essential H/ACA RNP assembly protein Shq1p
Descriptor: Protein SHQ1
Authors:Singh, M, Cascio, D, Gonzales, F.A, Heckmann, N, Chanfreau, G, Feigon, J.
Deposit date:2008-10-09
Release date:2008-11-18
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure and Functional Studies of the CS Domain of the Essential H/ACA Ribonucleoparticle Assembly Protein SHQ1.
J.Biol.Chem., 284, 2009
3E5M
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BU of 3e5m by Molmil
Crystal structure of the HSCARG Y81A mutant
Descriptor: NmrA-like family domain-containing protein 1
Authors:Li, Y, Meng, G, Dai, X, Luo, M, Zheng, X.
Deposit date:2008-08-14
Release date:2009-05-12
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:NADPH is an allosteric regulator of HSCARG
J.Mol.Biol., 387, 2009
3ER0
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BU of 3er0 by Molmil
Crystal structure of the full length eIF5A from Saccharomyces cerevisiae
Descriptor: Eukaryotic translation initiation factor 5A-2
Authors:Sanches, M, Dias, C.A.O, Aponi, L.H, Valentini, S.R, Guimaraes, B.
Deposit date:2008-10-01
Release date:2008-12-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.35 Å)
Cite:Crystal structure of the full length eIF5A from Saccharomyces cerevisiae
To be Published
3ESD
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BU of 3esd by Molmil
cut-2b; NCN-Pt-Pincer-Cutinase Hybrid
Descriptor: Cutinase 1, bromo(4-{3-[(R)-ethoxy(4-nitrophenoxy)phosphoryl]propyl}-2,6-bis[(methylsulfanyl-kappaS)methyl]phenyl-kappaC~1~)palladium(2+)
Authors:Rutten, L, Mannie, J.P.B.A, Lutz, M, Gros, P.
Deposit date:2008-10-05
Release date:2009-07-28
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:Solid-state structural characterization of cutinase-ECE-pincer-metal hybrids
Chemistry, 15, 2009
3ED8
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BU of 3ed8 by Molmil
Application of the superfolder YFP bimolecular fluorescence complementation for studying protein-protein interactions in vitro
Descriptor: yellow fluorescence protein
Authors:Ottmann, C, Weyand, M.
Deposit date:2008-09-02
Release date:2009-01-20
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Applicability of superfolder YFP bimolecular fluorescence complementation in vitro.
Biol.Chem., 390, 2009
3EU1
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BU of 3eu1 by Molmil
Crystal Structure determination of goat hemoglobin (Capra hircus) at 3 angstrom resolution
Descriptor: Hemoglobin subunit alpha-1/2, Hemoglobin subunit beta-A, PROTOPORPHYRIN IX CONTAINING FE
Authors:Sathya Moorthy, P, Neelagandan, K, Balasubramanian, M, Ponnuswamy, M.N.
Deposit date:2008-10-09
Release date:2009-11-10
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3 Å)
Cite:Purification, crystallization and preliminary X-ray diffraction studies on goat (Capra hircus) hemoglobin - a low oxygen affinity species
Protein Pept.Lett., 16, 2009
3EF7
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BU of 3ef7 by Molmil
ZP-N domain of mammalian sperm receptor ZP3 (crystal form III)
Descriptor: CALCIUM ION, Maltose-binding periplasmic protein, LINKER, ...
Authors:Monne, M, Jovine, L.
Deposit date:2008-09-08
Release date:2008-12-02
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Crystal structure of the ZP-N domain of ZP3 reveals the core fold of animal egg coats
Nature, 456, 2008
3EIP
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CRYSTAL STRUCTURE OF COLICIN E3 IMMUNITY PROTEIN: AN INHIBITOR TO A RIBOSOME-INACTIVATING RNASE
Descriptor: PROTEIN (COLICIN E3 IMMUNITY PROTEIN), ZINC ION
Authors:Li, C, Zhao, D, Djebli, A, Shoham, M.
Deposit date:1999-03-29
Release date:1999-11-10
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of colicin E3 immunity protein: an inhibitor of a ribosome-inactivating RNase.
Structure Fold.Des., 7, 1999
3EBQ
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BU of 3ebq by Molmil
Crystal structure of human PPPDE1
Descriptor: MERCURY (II) ION, MOLECULE: PPPDE1 (PERMUTED PAPAIN FOLD PEPTIDASES OF DSRNA VIRUSES AND EUKARYOTES 1), UPF0326 protein FAM152B
Authors:Walker, J.R, Akutsu, M, Qiu, L, Li, Y, Slessarev, Y, Bountra, C, Weigelt, J, Arrowsmith, C.H, Edwards, A.M, Botchkarev, A, Dhe-Paganon, S, Structural Genomics Consortium (SGC)
Deposit date:2008-08-28
Release date:2008-11-04
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of Human PPPDE1
To be Published
3EOZ
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BU of 3eoz by Molmil
Crystal Structure of Phosphoglycerate Mutase from Plasmodium Falciparum, PFD0660w
Descriptor: GLYCEROL, PHOSPHATE ION, putative Phosphoglycerate mutase
Authors:Wernimont, A.K, Tempel, W, Lam, A, Zhao, Y, Lew, J, Lin, Y.H, Wasney, G, Vedadi, M, Kozieradzki, I, Cossar, D, Schapira, M, Weigelt, J, Arrowsmith, C.H, Bochkarev, A, Edwards, A.M, Hui, R, Pizarro, J, Hills, T, Structural Genomics Consortium (SGC)
Deposit date:2008-09-29
Release date:2008-11-25
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Characterization of a new phosphatase from Plasmodium.
Mol.Biochem.Parasitol., 179, 2011
3EPR
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Crystal structure of putative HAD superfamily hydrolase from Streptococcus agalactiae.
Descriptor: GLYCEROL, Hydrolase, haloacid dehalogenase-like family, ...
Authors:Ramagopal, U.A, Toro, R, Dickey, M, Tang, B.K, Groshong, C, Rodgers, L, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-09-29
Release date:2008-11-04
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal structure of putative HAD superfamily hydrolase from Streptococcus agalactiae.
To be Published
3EPW
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Crystal structure of Trypanosoma vivax nucleoside hydrolase in complex with the inhibitor (2R,3R,4S)-1-[(4-hydroxy-5H-pyrrolo[3,2-d]pyrimidin-7-yl)methyl]-2-(hydroxymethyl)pyrrolidin-3,4-diol
Descriptor: 7-(((2R,3R,4S)-3,4-dihydroxy-2-(hydroxymethyl)pyrrolidin-1-yl)methyl)-3H-pyrrolo[3,2-d]pyrimidin-4(5H)-one, CALCIUM ION, IAG-nucleoside hydrolase, ...
Authors:Versees, W, Goeminne, A, Berg, M, Vandemeulebroucke, A, Haemers, A, Augustyns, K, Steyaert, J.
Deposit date:2008-09-30
Release date:2009-03-24
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal structures of T. vivax nucleoside hydrolase in complex with new potent and specific inhibitors.
Biochim.Biophys.Acta, 1794, 2009
3ED9
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BU of 3ed9 by Molmil
Carbonmonoxy Sperm Whale Myoglobin at 140 K: Laser on [30 min]
Descriptor: CARBON MONOXIDE, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Tomita, A, Sato, T, Ichiyanagi, K, Nozawa, S, Ichikawa, H, Chollet, M, Kawai, F, Park, S.-Y, Koshihara, S, Adachi, S.
Deposit date:2008-09-02
Release date:2009-02-24
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.21 Å)
Cite:Visualizing breathing motion of internal cavities in concert with ligand migration in myoglobin.
Proc.Natl.Acad.Sci.USA, 106, 2009
3EQE
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BU of 3eqe by Molmil
Crystal structure of the YubC protein from Bacillus subtilis. Northeast Structural Genomics Consortium target SR112.
Descriptor: FE (III) ION, Putative cystein dioxygenase
Authors:Vorobiev, S.M, Su, M, Seetharaman, J, Benach, J, Forouhar, F, Clayton, G, Cooper, B, Wang, H, Foote, E.L, Ciccosanti, C, Mao, L, Xiao, R, Acton, T.B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
Deposit date:2008-09-30
Release date:2008-10-14
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.82 Å)
Cite:Crystal structure of the YubC protein from Bacillus subtilis.
To be Published
3EDM
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BU of 3edm by Molmil
Crystal structure of a short chain dehydrogenase from Agrobacterium tumefaciens
Descriptor: Short chain dehydrogenase
Authors:Bonanno, J.B, Rutter, M, Bain, K.T, Chang, S, Romero, R, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-09-03
Release date:2008-09-30
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of a short chain dehydrogenase from Agrobacterium tumefaciens
To be Published
3EGC
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Crystal structure of a putative ribose operon repressor from Burkholderia thailandensis
Descriptor: putative ribose operon repressor
Authors:Bonanno, J.B, Patskovsky, Y, Gilmore, M, Bain, K.T, Hu, S, Romero, R, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-09-10
Release date:2008-09-30
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystal structure of a putative ribose operon repressor from Burkholderia thailandensis
To be Published

227111

數據於2024-11-06公開中

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